FFCP PHASE1:Mm9::chr1:135101254..135101286,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=424 | |MCL_coexpression_id=424 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:135101254..135101286,+ | |||
|description=CAGE_peak_at_chr1:135101254..135101286,+ | |description=CAGE_peak_at_chr1:135101254..135101286,+ | ||
|id=chr1:135101254..135101286,+ | |id=chr1:135101254..135101286,+ | ||
|ontology_enrichment_celltype=CL:0002563!4.37e-07!9;CL:0002251!4.37e-07!9 | |ontology_enrichment_celltype=CL:0002563!4.37e-07!9;CL:0002251!4.37e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.09e-10,9;CL:0002251,1.09e-10,9;CL:0002076,2.31e-09,15;CL:0000066,9.17e-09,25;CL:0000223,2.45e-07,20;CL:0000239,2.58e-07,6;CL:0000677,2.58e-07,6;CL:0000584,2.58e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.54e-15!59;UBERON:0000160!3.12e-14!43;UBERON:0000344!2.38e-11!15;UBERON:0001242!7.77e-10!13;UBERON:0000060!7.77e-10!13;UBERON:0001262!7.77e-10!13;UBERON:0004786!7.77e-10!13;UBERON:0001008!8.97e-09!17;UBERON:0001007!1.17e-08!128;UBERON:0001555!1.17e-08!128;UBERON:0007026!1.17e-08!128;UBERON:0006554!2.48e-08!16;UBERON:0004119!3.54e-08!130;UBERON:0000925!3.54e-08!130;UBERON:0006595!3.54e-08!130;UBERON:0004921!8.92e-08!126;UBERON:0004185!8.92e-08!126;UBERON:0002113!2.11e-07!14;UBERON:0003918!2.11e-07!14;UBERON:0005095!2.11e-07!14;UBERON:0007687!2.11e-07!14;UBERON:0003350!4.37e-07!9;UBERON:0004808!4.37e-07!9;UBERON:0001277!4.37e-07!9 | |ontology_enrichment_uberon=UBERON:0005409!1.54e-15!59;UBERON:0000160!3.12e-14!43;UBERON:0000344!2.38e-11!15;UBERON:0001242!7.77e-10!13;UBERON:0000060!7.77e-10!13;UBERON:0001262!7.77e-10!13;UBERON:0004786!7.77e-10!13;UBERON:0001008!8.97e-09!17;UBERON:0001007!1.17e-08!128;UBERON:0001555!1.17e-08!128;UBERON:0007026!1.17e-08!128;UBERON:0006554!2.48e-08!16;UBERON:0004119!3.54e-08!130;UBERON:0000925!3.54e-08!130;UBERON:0006595!3.54e-08!130;UBERON:0004921!8.92e-08!126;UBERON:0004185!8.92e-08!126;UBERON:0002113!2.11e-07!14;UBERON:0003918!2.11e-07!14;UBERON:0005095!2.11e-07!14;UBERON:0007687!2.11e-07!14;UBERON:0003350!4.37e-07!9;UBERON:0004808!4.37e-07!9;UBERON:0001277!4.37e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.44e-30,47;UBERON:0000160,3.80e-30,31;UBERON:0000344,1.02e-17,15;UBERON:0001242,3.23e-15,13;UBERON:0001262,3.23e-15,13;UBERON:0004786,3.23e-15,13;UBERON:0001007,8.47e-15,116;UBERON:0001555,8.47e-15,116;UBERON:0007026,8.47e-15,116;UBERON:0004119,2.61e-14,118;UBERON:0000925,2.61e-14,118;UBERON:0006595,2.61e-14,118;UBERON:0004921,3.08e-13,114;UBERON:0004923,8.84e-11,24;UBERON:0003350,1.09e-10,9;UBERON:0004808,1.09e-10,9;UBERON:0001277,1.09e-10,9;UBERON:0002113,2.04e-09,14;UBERON:0003918,2.04e-09,14;UBERON:0011143,2.04e-09,14;UBERON:0005095,2.04e-09,14;UBERON:0007687,2.04e-09,14;UBERON:0001008,7.94e-09,19;UBERON:0000485,2.43e-08,11;UBERON:0006554,3.74e-08,18 | |||
|phase1_expression=0,2.09385244583617,4.09499315450582,3.32710632437513,2.00358291978539,29.8825104003164,25.4637778249123,0,0,0,0,0,0,0,0,0,0,0,0,0,6.80346321208558,0,0,14.8792953197868,14.4527847072317,4.59385571292016,6.8921919385452,12.7128027284675,14.0617330397717,8.82105454159758,15.299405235216,0,0,0,9.53210345179206,7.31432439577366,13.0668388007916,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.46081959976873,0,0,0,0,0,0,0.589257170947335,0,0,0,0.0755715601067855,1.44932244350839,0,0,0,0,0,2.80888840263504,0,0,0,0,0,0,0,1.29894624606728,1.52015919285059,1.51657333504435,5.59501010623394,0,0.593768556259299,0.173485326766136,0.304465478312141,0.230615497256059,0.60289056221049,0.117588707135705,0,5.43828929015623,0,0,0,0,0,59.6453635897991,0,0.209446706813455,15.5828803677241,0,0,0,0,0,0,0,0,0,0.162241263067758,0.203678727700633,1.49288364732112,7.07623723614289,0.210441855886474,0.130120442962704,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,5.61711931072457,4.7601101999438,0.213288250535234,0.232236671860439,1.80414445850931,2.01683524623343,3.11329261382818,5.70676878337677,8.0669940462567,2.9645811850322,8.79673230800943,7.36138946552258,8.96834800747953,12.5834717211591,35.8789162791992,36.0445704590405,0,0.571242563048644,2.25415471346161,2.8511185898344,5.62462212786115,5.75113723100612,9.42224403151434,26.4222164883488,24.9627977267786,22.9518724894549,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,1.66277871149944,0,0.162964976442026,0,0.469380496577004,0.167506257441816,1.19021820443007,0.585400943573396,0.472905432318573,0.44292937929755,0.956728611944923,0.81931657357869,1.20879487306127,1.88043776155965,0,0,0,0,0.160550589987792,0,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0,0,4.11626247103979,0,0,5.60898418106621,0,0,0.604647113929502,0,0,0,0.516856586336442,0,0.356497378384721,0,0,1.03135543248187,21.4476951624886,0,0,0,0,0,0.493647061806363,0.913394847343798,0,0,8.15955072803359,0.32977250588296,0.161464426695906,0.663442174209714,1.3130957840345,1.96969079694074,7.86998258900597,0,0,0,0,0,0.136694227721025,0,0,0,0,6.68269432610579,0.158167996790568,1.01659733563424,1.29606408986162,2.29997125615916,2.18362563746178,1.07891477107857,2.31429676030941,1.83229159388821,50.4202246105074,1.86401793926078,0,0,0.165458490457098,0,0,0,0,0,0,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0.680191150845634,0,0,0,0.772758376128762,0.93841237725591,24.5423176518135,1.92931541171159,9.02829787263654,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.888986911206461,0.412070114477788,0.64183841918363,0.252697211763798,0.50695859978048,0,0.655490552289177,0.256100609619477,0.34461281373368,0,0.463537303779422,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,0.476872379894642,0.436039249896986,0.846984423737976,0.423073039458382,0.73171189149109,0.526139422875686,0.271608227691724,1.12228454331548,0.355905054372522,0.492522411877817,0,0.154936841185966,0.385813221962283,0,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421 | |phase1_expression=0,2.09385244583617,4.09499315450582,3.32710632437513,2.00358291978539,29.8825104003164,25.4637778249123,0,0,0,0,0,0,0,0,0,0,0,0,0,6.80346321208558,0,0,14.8792953197868,14.4527847072317,4.59385571292016,6.8921919385452,12.7128027284675,14.0617330397717,8.82105454159758,15.299405235216,0,0,0,9.53210345179206,7.31432439577366,13.0668388007916,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.46081959976873,0,0,0,0,0,0,0.589257170947335,0,0,0,0.0755715601067855,1.44932244350839,0,0,0,0,0,2.80888840263504,0,0,0,0,0,0,0,1.29894624606728,1.52015919285059,1.51657333504435,5.59501010623394,0,0.593768556259299,0.173485326766136,0.304465478312141,0.230615497256059,0.60289056221049,0.117588707135705,0,5.43828929015623,0,0,0,0,0,59.6453635897991,0,0.209446706813455,15.5828803677241,0,0,0,0,0,0,0,0,0,0.162241263067758,0.203678727700633,1.49288364732112,7.07623723614289,0.210441855886474,0.130120442962704,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,5.61711931072457,4.7601101999438,0.213288250535234,0.232236671860439,1.80414445850931,2.01683524623343,3.11329261382818,5.70676878337677,8.0669940462567,2.9645811850322,8.79673230800943,7.36138946552258,8.96834800747953,12.5834717211591,35.8789162791992,36.0445704590405,0,0.571242563048644,2.25415471346161,2.8511185898344,5.62462212786115,5.75113723100612,9.42224403151434,26.4222164883488,24.9627977267786,22.9518724894549,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,1.66277871149944,0,0.162964976442026,0,0.469380496577004,0.167506257441816,1.19021820443007,0.585400943573396,0.472905432318573,0.44292937929755,0.956728611944923,0.81931657357869,1.20879487306127,1.88043776155965,0,0,0,0,0.160550589987792,0,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0,0,4.11626247103979,0,0,5.60898418106621,0,0,0.604647113929502,0,0,0,0.516856586336442,0,0.356497378384721,0,0,1.03135543248187,21.4476951624886,0,0,0,0,0,0.493647061806363,0.913394847343798,0,0,8.15955072803359,0.32977250588296,0.161464426695906,0.663442174209714,1.3130957840345,1.96969079694074,7.86998258900597,0,0,0,0,0,0.136694227721025,0,0,0,0,6.68269432610579,0.158167996790568,1.01659733563424,1.29606408986162,2.29997125615916,2.18362563746178,1.07891477107857,2.31429676030941,1.83229159388821,50.4202246105074,1.86401793926078,0,0,0.165458490457098,0,0,0,0,0,0,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0.680191150845634,0,0,0,0.772758376128762,0.93841237725591,24.5423176518135,1.92931541171159,9.02829787263654,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.888986911206461,0.412070114477788,0.64183841918363,0.252697211763798,0.50695859978048,0,0.655490552289177,0.256100609619477,0.34461281373368,0,0.463537303779422,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,0.476872379894642,0.436039249896986,0.846984423737976,0.423073039458382,0.73171189149109,0.526139422875686,0.271608227691724,1.12228454331548,0.355905054372522,0.492522411877817,0,0.154936841185966,0.385813221962283,0,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr1:135101254..135101286,+ | |short_description=p@chr1:135101254..135101286,+ | ||
}} | }} |
Latest revision as of 19:20, 4 August 2015
Short description: | p@chr1:135101254..135101286, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:135101254..135101286, + |
Coexpression cluster: | MCL_coexpression_mm9:424 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.09e-10 | 9 |
epithelial cell of alimentary canal | 1.09e-10 | 9 |
endo-epithelial cell | 2.31e-09 | 15 |
epithelial cell | 9.17e-09 | 25 |
endodermal cell | 2.45e-07 | 20 |
brush border epithelial cell | 2.58e-07 | 6 |
gut absorptive cell | 2.58e-07 | 6 |
enterocyte | 2.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.44e-30 | 47 |
intestine | 3.80e-30 | 31 |
mucosa | 1.02e-17 | 15 |
intestinal mucosa | 3.23e-15 | 13 |
wall of intestine | 3.23e-15 | 13 |
gastrointestinal system mucosa | 3.23e-15 | 13 |
digestive system | 8.47e-15 | 116 |
digestive tract | 8.47e-15 | 116 |
primitive gut | 8.47e-15 | 116 |
endoderm-derived structure | 2.61e-14 | 118 |
endoderm | 2.61e-14 | 118 |
presumptive endoderm | 2.61e-14 | 118 |
subdivision of digestive tract | 3.08e-13 | 114 |
organ component layer | 8.84e-11 | 24 |
epithelium of mucosa | 1.09e-10 | 9 |
gastrointestinal system epithelium | 1.09e-10 | 9 |
intestinal epithelium | 1.09e-10 | 9 |
kidney | 2.04e-09 | 14 |
kidney mesenchyme | 2.04e-09 | 14 |
upper urinary tract | 2.04e-09 | 14 |
kidney rudiment | 2.04e-09 | 14 |
kidney field | 2.04e-09 | 14 |
renal system | 7.94e-09 | 19 |
simple columnar epithelium | 2.43e-08 | 11 |
urinary system structure | 3.74e-08 | 18 |