FFCP PHASE1:Mm9::chr10:80857544..80857565,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:80857544..80857565,- | |||
|description=CAGE_peak_at_chr10:80857544..80857565,- | |description=CAGE_peak_at_chr10:80857544..80857565,- | ||
|id=chr10:80857544..80857565,- | |id=chr10:80857544..80857565,- | ||
|ontology_enrichment_celltype=CL:0002563!5.58e-14!9;CL:0002251!5.58e-14!9;CL:0000239!1.93e-10!6;CL:0000677!1.93e-10!6;CL:0000212!1.93e-10!6;CL:0000584!1.93e-10!6;CL:0000075!8.75e-09!7;CL:0002076!1.68e-07!15;CL:0000066!3.32e-07!25 | |ontology_enrichment_celltype=CL:0002563!5.58e-14!9;CL:0002251!5.58e-14!9;CL:0000239!1.93e-10!6;CL:0000677!1.93e-10!6;CL:0000212!1.93e-10!6;CL:0000584!1.93e-10!6;CL:0000075!8.75e-09!7;CL:0002076!1.68e-07!15;CL:0000066!3.32e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.52e-19,9;CL:0002251,1.52e-19,9;CL:0000239,1.11e-17,6;CL:0000677,1.11e-17,6;CL:0000584,1.11e-17,6;CL:0000075,4.63e-15,7;CL:0000066,3.27e-12,25;CL:0002076,3.30e-11,15;CL:0000682,5.82e-10,3;CL:0000223,4.39e-08,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.40e-23!15;UBERON:0000160!5.77e-23!43;UBERON:0005409!2.58e-22!59;UBERON:0001242!4.88e-20!13;UBERON:0000060!4.88e-20!13;UBERON:0001262!4.88e-20!13;UBERON:0004786!4.88e-20!13;UBERON:0004923!2.19e-14!24;UBERON:0003350!5.58e-14!9;UBERON:0004808!5.58e-14!9;UBERON:0001277!5.58e-14!9;UBERON:0000485!5.05e-11!11;UBERON:0004119!1.41e-07!130;UBERON:0000925!1.41e-07!130;UBERON:0006595!1.41e-07!130;UBERON:0001007!3.12e-07!128;UBERON:0001555!3.12e-07!128;UBERON:0007026!3.12e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.81e-48,31;UBERON:0000344,6.40e-36,15;UBERON:0001242,2.03e-30,13;UBERON:0001262,2.03e-30,13;UBERON:0004786,2.03e-30,13;UBERON:0005409,3.76e-30,47;UBERON:0004923,2.67e-21,24;UBERON:0003350,1.52e-19,9;UBERON:0004808,1.52e-19,9;UBERON:0001277,1.52e-19,9;UBERON:0000485,9.34e-16,11;UBERON:0002108,2.44e-12,4;UBERON:0001007,1.67e-11,116;UBERON:0001555,1.67e-11,116;UBERON:0007026,1.67e-11,116;UBERON:0004119,3.22e-11,118;UBERON:0000925,3.22e-11,118;UBERON:0006595,3.22e-11,118;UBERON:0000331,8.14e-10,3;UBERON:0002116,8.14e-10,3;UBERON:0001204,8.14e-10,3;UBERON:0001168,8.14e-10,3;UBERON:0004921,1.85e-09,114;UBERON:0001962,5.41e-07,2;UBERON:0001961,5.41e-07,2;UBERON:0001744,5.41e-07,2 | |||
|phase1_expression=0,6.63053274514786,16.8349718574128,4.83942738090928,14.5259761684441,3.18970616632591,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,2.21112554392781,0,0,4.15980299262857,6.65286915094793,11.4846392823004,10.7690499039769,4.30942465371778,6.84084310042946,18.9022597319948,2.88249663851896,0,0,0,0.577703239502549,2.49351968037739,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,1.86391761218122,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,3.17340679996253,0,0,0.128867461322093,0,0,0.570676878337677,4.74529061544512,2.79988223030818,2.76468729680296,1.1937388322469,1.55971269695296,1.79763881730844,3.6743468478698,3.18626037206988,0,0.342745537829186,0,0,0.193952487167626,0,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,3.20628920292836,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.0826534557253359,0.785267825952089,0.777689839750757,0,1.69107881605257,0,0,0,0,0,0,0,0,0.724752362478018,1.44015003128933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,6.63053274514786,16.8349718574128,4.83942738090928,14.5259761684441,3.18970616632591,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,2.21112554392781,0,0,4.15980299262857,6.65286915094793,11.4846392823004,10.7690499039769,4.30942465371778,6.84084310042946,18.9022597319948,2.88249663851896,0,0,0,0.577703239502549,2.49351968037739,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,1.86391761218122,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,3.17340679996253,0,0,0.128867461322093,0,0,0.570676878337677,4.74529061544512,2.79988223030818,2.76468729680296,1.1937388322469,1.55971269695296,1.79763881730844,3.6743468478698,3.18626037206988,0,0.342745537829186,0,0,0.193952487167626,0,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,3.20628920292836,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.0826534557253359,0.785267825952089,0.777689839750757,0,1.69107881605257,0,0,0,0,0,0,0,0,0.724752362478018,1.44015003128933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:80857544..80857565,- | |short_description=p@chr10:80857544..80857565,- | ||
}} | }} |
Latest revision as of 21:20, 4 August 2015
Short description: | p@chr10:80857544..80857565, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:80857544..80857565, - |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.52e-19 | 9 |
epithelial cell of alimentary canal | 1.52e-19 | 9 |
brush border epithelial cell | 1.11e-17 | 6 |
gut absorptive cell | 1.11e-17 | 6 |
enterocyte | 1.11e-17 | 6 |
columnar/cuboidal epithelial cell | 4.63e-15 | 7 |
epithelial cell | 3.27e-12 | 25 |
endo-epithelial cell | 3.30e-11 | 15 |
M cell of gut | 5.82e-10 | 3 |
endodermal cell | 4.39e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.81e-48 | 31 |
mucosa | 6.40e-36 | 15 |
intestinal mucosa | 2.03e-30 | 13 |
wall of intestine | 2.03e-30 | 13 |
gastrointestinal system mucosa | 2.03e-30 | 13 |
gastrointestinal system | 3.76e-30 | 47 |
organ component layer | 2.67e-21 | 24 |
epithelium of mucosa | 1.52e-19 | 9 |
gastrointestinal system epithelium | 1.52e-19 | 9 |
intestinal epithelium | 1.52e-19 | 9 |
simple columnar epithelium | 9.34e-16 | 11 |
small intestine | 2.44e-12 | 4 |
digestive system | 1.67e-11 | 116 |
digestive tract | 1.67e-11 | 116 |
primitive gut | 1.67e-11 | 116 |
endoderm-derived structure | 3.22e-11 | 118 |
endoderm | 3.22e-11 | 118 |
presumptive endoderm | 3.22e-11 | 118 |
ileal mucosa | 8.14e-10 | 3 |
ileum | 8.14e-10 | 3 |
mucosa of small intestine | 8.14e-10 | 3 |
wall of small intestine | 8.14e-10 | 3 |
subdivision of digestive tract | 1.85e-09 | 114 |
gut-associated lymphoid tissue | 5.41e-07 | 2 |
mucosa-associated lymphoid tissue | 5.41e-07 | 2 |
lymphoid tissue | 5.41e-07 | 2 |