FFCP PHASE1:Mm9::chr17:43705451..43705490,+: Difference between revisions
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{{FFCP|EntrezGene=27226|HGNC=|MCL_coexpression_id=3100|UniProt=E9Q4T5|association_with_transcript=27bp_to_ENSMUST00000167418_5end|description=CAGE_peak_2_at_Pla2g7_5end|id=chr17:43705451..43705490,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.64e-13!63;UBERON:0004121!8.70e-12!102;UBERON:0000924!8.70e-12!102;UBERON:0006601!8.70e-12!102;UBERON:0002346!1.18e-09!71;UBERON:0003075!1.18e-09!71;UBERON:0007284!1.18e-09!71;UBERON:0001049!1.18e-09!52;UBERON:0005068!1.18e-09!52;UBERON:0006241!1.18e-09!52;UBERON:0007135!1.18e-09!52;UBERON:0000073!2.54e-09!75;UBERON:0001016!2.54e-09!75;UBERON:0000955!8.10e-09!50;UBERON:0006238!8.10e-09!50;UBERON:0001017!1.04e-08!73;UBERON:0005743!1.04e-08!73;UBERON:0002616!2.30e-08!49;UBERON:0003056!4.04e-08!49;UBERON:0002020!5.55e-08!34|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.98e-12,95;UBERON:0000924,2.98e-12,95;UBERON:0006601,2.98e-12,95;UBERON:0010371,2.14e-10,73;UBERON:0002346,4.12e-10,64;UBERON:0003075,4.12e-10,64;UBERON:0007284,4.12e-10,64;UBERON:0000073,5.04e-10,54;UBERON:0001049,4.85e-09,52;UBERON:0005068,4.85e-09,52;UBERON:0006241,4.85e-09,52;UBERON:0007135,4.85e-09,52;UBERON:0001016,5.18e-09,75;UBERON:0001017,2.13e-08,73;UBERON:0002020,1.74e-07,34;UBERON:0003056,3.04e-07,49;UBERON:0010314,5.16e-07,92;UBERON:0000955,8.08e-07,47;UBERON:0006238,8.08e-07,47|phase1_expression=222.446748628559,0,0,0,0,0.16787927191189,0,0.387369970324729,0,0,0,0,0,0,4.66353666541928,4.45445588257617,9.79386629379405,4.88966356305268,6.30726394586398,5.51706547337439,13.1817099734158,0,0,4.63978026100879,7.57050627521661,1.14846392823004,0,0,0.570070258369122,1.00812051903972,1.55211357458713,0,0,0,0,0,0,7.95210098400125,19.533383613095,5.75876118371178,9.41170380849623,15.7100461540443,7.76816564849846,0,0,0,0,8.28495594245697,12.5221124158649,14.9711022287198,4.61955191363696,2.87505128729943,0.671130424230945,0,0.336093799142464,1.02903774414379,6.01720223871389,3.09403255366465,4.45096213891115,11.1088105647127,5.07065122804943,1.69422266034566,0,120.136612257067,140.41902348451,102.309136552238,31.4580116044325,34.9638657842615,0.622137673850866,0.675029691658453,0.841299845405528,43.7046006137819,41.5232856989033,1.10241719293459,0.287536413054709,0.919218786610021,56.1590993096882,42.6475709204527,57.2952369045788,3.42904348098504,2.28719109006024,1.04182674111352,65.0496387673218,43.3327209724394,31.4764390420229,45.6674307484185,36.8742653269677,11.9295645328192,13.9336195733059,7.10372665003784,0.289864488701678,0,0,0.539703191637817,0,0,7.44355426698285,0,0,0,119.716906810178,0,0,0,1.5154372870785,0.506719730950197,0.505524445014783,4.90990682791958,8.2860122767095,9.79718117827843,0.346970653532272,0.304465478312141,1.61430848079241,1.50722640552623,2.70454026412121,1.63366568728578,5.43828929015623,7.95296463059514,7.07688441559899,3.23533699894818,5.07935492458905,5.33362778448744,3.72783522436244,68.2179257036905,86.08259650033,4.85368404896324,0,0,0.127070227073065,39.2451475240635,28.3650373747548,5.27748278874031,29.8977830730716,29.6629930503183,43.6354893575076,40.5603157669394,2.85150218780886,6.59356944233493,3.0326731012041,12.6265113531884,0.910843100738926,20.921091503446,27.7295679900238,25.0169997607287,30.8885706147028,36.5124102811822,23.6128345890517,53.0341910014982,0.215567992932842,0.189106080167819,0.527853372491847,0.43839146485515,0.556094498451196,0.696504333044333,1.85203922767149,0.59710280045548,0,0.257347907114715,0,1.44988040774851,1.64168241986767,1.08037236876609,0.473489471170421,0.983821158737019,1.23413690309903,1.39520366850245,1.07309360559848,1.40118410840603,0.987359099480883,1.47750717671186,1.37816976227955,2.63159977365598,2.63460138349261,2.95254121272818,33.8566817188245,8.95270127699774,0.330418782983798,3.43785736662608,0.213288250535234,0.464473343720877,0.77320476793256,1.4117846723634,2.89091456998331,3.80451252225118,5.21981967698963,7.41145296258049,6.03204501120647,6.16765063327568,7.60359939764569,3.59527763461689,3.45820879799511,3.98282546508734,3.98302592001472,4.34144347916969,2.25415471346161,5.09128319613286,3.87904974335251,5.40045813155453,5.12215950706484,3.09981310757165,3.92496819603437,4.07210640941942,1.1858105083486,0.333690211432188,0.982794975566015,0.674586337154561,2.43432145666204,3.61765739628625,6.3656462945355,5.75392274901621,12.8086829152278,10.9824565275233,4.31304619582064,7.07067800570156,3.12037673114561,2.27320990152401,1.25578189465339,1.4473305640901,3.51031061316549,0.189491411770485,0.651859905768103,0.678980343100753,0.234690248288502,1.00503754465089,0.714130922658041,1.36593553500459,2.20689201748667,1.55025282754142,1.59454768657487,4.09658286789345,3.10832967358612,4.05017364028232,93.4905960423488,92.4639662491806,1.47529281905711,4.96686143348518,98.5780622525043,81.4621221815812,1.3114795630134,26.7619182836635,0.315508219416257,0.390438744296638,0.4308467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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:27226 | |||
|HGNC= | |||
|MCL_coexpression_id=3100 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q4T5 | |||
|association_with_transcript=27bp_to_ENSMUST00000167418_5end | |||
|cluster_id=chr17:43705451..43705490,+ | |||
|description=CAGE_peak_2_at_Pla2g7_5end | |||
|id=chr17:43705451..43705490,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.64e-13!63;UBERON:0004121!8.70e-12!102;UBERON:0000924!8.70e-12!102;UBERON:0006601!8.70e-12!102;UBERON:0002346!1.18e-09!71;UBERON:0003075!1.18e-09!71;UBERON:0007284!1.18e-09!71;UBERON:0001049!1.18e-09!52;UBERON:0005068!1.18e-09!52;UBERON:0006241!1.18e-09!52;UBERON:0007135!1.18e-09!52;UBERON:0000073!2.54e-09!75;UBERON:0001016!2.54e-09!75;UBERON:0000955!8.10e-09!50;UBERON:0006238!8.10e-09!50;UBERON:0001017!1.04e-08!73;UBERON:0005743!1.04e-08!73;UBERON:0002616!2.30e-08!49;UBERON:0003056!4.04e-08!49;UBERON:0002020!5.55e-08!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.98e-12,95;UBERON:0000924,2.98e-12,95;UBERON:0006601,2.98e-12,95;UBERON:0010371,2.14e-10,73;UBERON:0002346,4.12e-10,64;UBERON:0003075,4.12e-10,64;UBERON:0007284,4.12e-10,64;UBERON:0000073,5.04e-10,54;UBERON:0001049,4.85e-09,52;UBERON:0005068,4.85e-09,52;UBERON:0006241,4.85e-09,52;UBERON:0007135,4.85e-09,52;UBERON:0001016,5.18e-09,75;UBERON:0001017,2.13e-08,73;UBERON:0002020,1.74e-07,34;UBERON:0003056,3.04e-07,49;UBERON:0010314,5.16e-07,92;UBERON:0000955,8.08e-07,47;UBERON:0006238,8.08e-07,47 | |||
|phase1_expression=222.446748628559,0,0,0,0,0.16787927191189,0,0.387369970324729,0,0,0,0,0,0,4.66353666541928,4.45445588257617,9.79386629379405,4.88966356305268,6.30726394586398,5.51706547337439,13.1817099734158,0,0,4.63978026100879,7.57050627521661,1.14846392823004,0,0,0.570070258369122,1.00812051903972,1.55211357458713,0,0,0,0,0,0,7.95210098400125,19.533383613095,5.75876118371178,9.41170380849623,15.7100461540443,7.76816564849846,0,0,0,0,8.28495594245697,12.5221124158649,14.9711022287198,4.61955191363696,2.87505128729943,0.671130424230945,0,0.336093799142464,1.02903774414379,6.01720223871389,3.09403255366465,4.45096213891115,11.1088105647127,5.07065122804943,1.69422266034566,0,120.136612257067,140.41902348451,102.309136552238,31.4580116044325,34.9638657842615,0.622137673850866,0.675029691658453,0.841299845405528,43.7046006137819,41.5232856989033,1.10241719293459,0.287536413054709,0.919218786610021,56.1590993096882,42.6475709204527,57.2952369045788,3.42904348098504,2.28719109006024,1.04182674111352,65.0496387673218,43.3327209724394,31.4764390420229,45.6674307484185,36.8742653269677,11.9295645328192,13.9336195733059,7.10372665003784,0.289864488701678,0,0,0.539703191637817,0,0,7.44355426698285,0,0,0,119.716906810178,0,0,0,1.5154372870785,0.506719730950197,0.505524445014783,4.90990682791958,8.2860122767095,9.79718117827843,0.346970653532272,0.304465478312141,1.61430848079241,1.50722640552623,2.70454026412121,1.63366568728578,5.43828929015623,7.95296463059514,7.07688441559899,3.23533699894818,5.07935492458905,5.33362778448744,3.72783522436244,68.2179257036905,86.08259650033,4.85368404896324,0,0,0.127070227073065,39.2451475240635,28.3650373747548,5.27748278874031,29.8977830730716,29.6629930503183,43.6354893575076,40.5603157669394,2.85150218780886,6.59356944233493,3.0326731012041,12.6265113531884,0.910843100738926,20.921091503446,27.7295679900238,25.0169997607287,30.8885706147028,36.5124102811822,23.6128345890517,53.0341910014982,0.215567992932842,0.189106080167819,0.527853372491847,0.43839146485515,0.556094498451196,0.696504333044333,1.85203922767149,0.59710280045548,0,0.257347907114715,0,1.44988040774851,1.64168241986767,1.08037236876609,0.473489471170421,0.983821158737019,1.23413690309903,1.39520366850245,1.07309360559848,1.40118410840603,0.987359099480883,1.47750717671186,1.37816976227955,2.63159977365598,2.63460138349261,2.95254121272818,33.8566817188245,8.95270127699774,0.330418782983798,3.43785736662608,0.213288250535234,0.464473343720877,0.77320476793256,1.4117846723634,2.89091456998331,3.80451252225118,5.21981967698963,7.41145296258049,6.03204501120647,6.16765063327568,7.60359939764569,3.59527763461689,3.45820879799511,3.98282546508734,3.98302592001472,4.34144347916969,2.25415471346161,5.09128319613286,3.87904974335251,5.40045813155453,5.12215950706484,3.09981310757165,3.92496819603437,4.07210640941942,1.1858105083486,0.333690211432188,0.982794975566015,0.674586337154561,2.43432145666204,3.61765739628625,6.3656462945355,5.75392274901621,12.8086829152278,10.9824565275233,4.31304619582064,7.07067800570156,3.12037673114561,2.27320990152401,1.25578189465339,1.4473305640901,3.51031061316549,0.189491411770485,0.651859905768103,0.678980343100753,0.234690248288502,1.00503754465089,0.714130922658041,1.36593553500459,2.20689201748667,1.55025282754142,1.59454768657487,4.09658286789345,3.10832967358612,4.05017364028232,93.4905960423488,92.4639662491806,1.47529281905711,4.96686143348518,98.5780622525043,81.4621221815812,1.3114795630134,26.7619182836635,0.315508219416257,0.390438744296638,0.430846795465598,0,0.445597348164788,0,0,0.584511715822624,0,38.8798792870387,3.97432238583152,2.13678724400706,1.95464351224291,2.8044920905331,1.32745138339963,0,0,0.754420319023592,0.885905678642318,1.53717573971964,2.32585463851399,1.81766864738753,2.49548164869305,1.26414703174326,1.05418608574999,1.03135543248187,5.44703369206061,0.36012218806262,1.4229455216103,0.643011105094777,0.886701168211368,1.24858172321449,2.46823530903181,4.26250928760439,0.469343416127421,9.32061111800809,0.661585194164886,2.96795255294664,5.16686165426898,0.965006798850494,1.67121281604391,1.31312719796049,4.66369338607761,90.1166967771077,9.22702756308404,4.74689796315412,4.8150577116125,2.0720530270516,5.46776910884101,6.86334519619568,0,0,0.138199973804424,3.81868247206045,0,0.406638934253697,0.648032044930808,0.209088296014469,1.74690050996942,0.944050424693745,1.90102948168273,2.87931536182433,3.11075935900303,4.97071450469541,1.12738587736838,0.598066184175915,0.496375471371293,1.16670713006429,0.387479470433193,0,1.05621514781179,1.0416350787516,2.51662426621706,2.89900944991207,5.76060012515731,1.89606672376907,1.82452693761148,0.924398614483445,0.909445760844565,1.25318686967237,0.596044064343795,0.841368146639782,0.886137163047463,1.11063094942962,0.914481679859998,1.00826185136841,1.36441033035653,1.44317762460494,1.98690733708667,4.53460767230423,0.221985953374065,0.269141569828427,0.503653849092235,4.056981474676,1.12609485270709,4.212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| |||
|short_description=p2@Pla2g7 | |||
}} |
Revision as of 22:04, 4 August 2015
Short description: | p2@Pla2g7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pla2g7_5end |
Coexpression cluster: | MCL_coexpression_mm9:3100 |
Association with transcript: | 27bp_to_ENSMUST00000167418_5end |
EntrezGene: | 27226 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.98e-12 | 95 |
ectoderm | 2.98e-12 | 95 |
presumptive ectoderm | 2.98e-12 | 95 |
ecto-epithelium | 2.14e-10 | 73 |
neurectoderm | 4.12e-10 | 64 |
neural plate | 4.12e-10 | 64 |
presumptive neural plate | 4.12e-10 | 64 |
regional part of nervous system | 5.04e-10 | 54 |
neural tube | 4.85e-09 | 52 |
neural rod | 4.85e-09 | 52 |
future spinal cord | 4.85e-09 | 52 |
neural keel | 4.85e-09 | 52 |
nervous system | 5.18e-09 | 75 |
central nervous system | 2.13e-08 | 73 |
gray matter | 1.74e-07 | 34 |
pre-chordal neural plate | 3.04e-07 | 49 |
structure with developmental contribution from neural crest | 5.16e-07 | 92 |
brain | 8.08e-07 | 47 |
future brain | 8.08e-07 | 47 |