FFCP PHASE1:Mm9::chr7:29167995..29168010,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr7:29167995..29168010,- to FFCP PHASE1:Mm9::chr7:29167995..29168010,-: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:29167995..29168010,- | |||
|description=CAGE_peak_at_chr7:29167995..29168010,- | |||
|id=chr7:29167995..29168010,- | |||
|ontology_enrichment_celltype=CL:0000063!2.89e-16!66;CL:0000066!1.44e-10!25;CL:0002563!3.10e-10!9;CL:0002251!3.10e-10!9;CL:0002320!6.60e-10!46;CL:0000134!6.60e-10!46;CL:0000144!3.24e-09!121;CL:0000012!3.24e-09!121;CL:0000988!8.96e-09!32;CL:0002032!8.96e-09!32;CL:0000037!8.96e-09!32;CL:0000566!8.96e-09!32;CL:0000837!8.96e-09!32;CL:0000223!1.98e-08!20;CL:0000219!2.84e-08!54;CL:0000075!9.21e-08!7;CL:0002371!9.82e-08!118;CL:0000239!1.17e-07!6;CL:0000677!1.17e-07!6;CL:0000212!1.17e-07!6;CL:0000584!1.17e-07!6;CL:0000838!4.73e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.22e-19,25;CL:0000223,5.63e-16,20;CL:0002563,6.76e-16,9;CL:0002251,6.76e-16,9;CL:0000239,3.96e-14,6;CL:0000677,3.96e-14,6;CL:0000584,3.96e-14,6;CL:0000075,5.51e-12,7;CL:0000182,1.05e-09,5;CL:0002076,6.60e-09,15;CL:0000682,1.88e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.47e-07,3;DOID:4045,1.47e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000344!5.51e-14!15;UBERON:0001242!2.04e-12!13;UBERON:0000060!2.04e-12!13;UBERON:0001262!2.04e-12!13;UBERON:0004786!2.04e-12!13;UBERON:0000160!9.46e-11!43;UBERON:0003350!3.10e-10!9;UBERON:0004808!3.10e-10!9;UBERON:0001277!3.10e-10!9;UBERON:0002384!6.60e-10!46;UBERON:0004923!1.25e-09!24;UBERON:0000485!4.12e-09!11;UBERON:0005409!6.49e-08!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.87e-16,15;UBERON:0003350,6.76e-16,9;UBERON:0004808,6.76e-16,9;UBERON:0001277,6.76e-16,9;UBERON:0001242,3.18e-13,13;UBERON:0001262,3.18e-13,13;UBERON:0004786,3.18e-13,13;UBERON:0000485,1.02e-12,11;UBERON:0004923,3.09e-09,24;UBERON:0000160,6.92e-08,31 | |||
|phase1_expression=0,6.97950815278722,5.91499011206397,10.8887116070459,11.520601788766,3.02182689441402,2.33612640595526,2.06597317506522,1.12630977721333,0.70219357896598,0.171217968225505,0,0.171200729931206,1.48614684112296,0,0,0,0.473193248037357,0.685572168028694,0.42438965179803,0.0850432901510698,0.198581902401771,0.261199789138935,1.59992422793407,1.37645568640302,5.7423196411502,2.58457197695445,3.01659725760245,0.190023419456374,0.252030129759931,0.886922042621219,0,0,0,3.17736781726402,0.997407872150954,3.26670970019791,4.60384793810598,6.2506827561904,2.09409497589519,42.352667138233,10.2456822743767,7.76816564849846,0,0.101376931219515,0,0,0,0,0,0,0,3.85899993932794,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,1.73918693221007,0.860423876981386,1.3599426674155,2.15881276655127,1.94932925234301,1.34408066129201,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0.517875767294343,0.148442139064825,0,0,0,0,0,0,0.247194967734374,0,0,0.161766849947409,0,0,0,0,0,0.766371165625774,2.03685711660064,4.19931911695385,2.92261522268049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1066395619397,2.31613116403244,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,0.528901133327089,0,0,0,0.201683524623343,0.889512175379481,0.760902504450237,1.89811624617805,0.823494773620054,0.251335208800269,0.397912944082302,0.58489226135736,1.79763881730844,0.648414149624083,0.995706366271836,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0,1.50791283939272,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0.18542530201051,0,0.206386867963223,0,0,0.136694227721025,0,3.22959016988325,3.91864066506242,1.10559979043539,0,0,0,0.108005340821801,0,0,0,0,0,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0.288635524920988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0,0,0.365855945745545,0,0,1.12228454331548,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,6.97950815278722,5.91499011206397,10.8887116070459,11.520601788766,3.02182689441402,2.33612640595526,2.06597317506522,1.12630977721333,0.70219357896598,0.171217968225505,0,0.171200729931206,1.48614684112296,0,0,0,0.473193248037357,0.685572168028694,0.42438965179803,0.0850432901510698,0.198581902401771,0.261199789138935,1.59992422793407,1.37645568640302,5.7423196411502,2.58457197695445,3.01659725760245,0.190023419456374,0.252030129759931,0.886922042621219,0,0,0,3.17736781726402,0.997407872150954,3.26670970019791,4.60384793810598,6.2506827561904,2.09409497589519,42.352667138233,10.2456822743767,7.76816564849846,0,0.101376931219515,0,0,0,0,0,0,0,3.85899993932794,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,1.73918693221007,0.860423876981386,1.3599426674155,2.15881276655127,1.94932925234301,1.34408066129201,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,0.517875767294343,0.148442139064825,0,0,0,0,0,0,0.247194967734374,0,0,0.161766849947409,0,0,0,0,0,0.766371165625774,2.03685711660064,4.19931911695385,2.92261522268049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1066395619397,2.31613116403244,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64335026387038,0.528901133327089,0,0,0,0.201683524623343,0.889512175379481,0.760902504450237,1.89811624617805,0.823494773620054,0.251335208800269,0.397912944082302,0.58489226135736,1.79763881730844,0.648414149624083,0.995706366271836,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0,1.50791283939272,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0.18542530201051,0,0.206386867963223,0,0,0.136694227721025,0,3.22959016988325,3.91864066506242,1.10559979043539,0,0,0,0.108005340821801,0,0,0,0,0,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0.288635524920988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0,0,0.365855945745545,0,0,1.12228454331548,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:29167995..29168010,- | |||
}} | }} |
Latest revision as of 23:03, 4 August 2015
Short description: | p@chr7:29167995..29168010, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:29167995..29168010, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.22e-19 | 25 |
endodermal cell | 5.63e-16 | 20 |
intestinal epithelial cell | 6.76e-16 | 9 |
epithelial cell of alimentary canal | 6.76e-16 | 9 |
brush border epithelial cell | 3.96e-14 | 6 |
gut absorptive cell | 3.96e-14 | 6 |
enterocyte | 3.96e-14 | 6 |
columnar/cuboidal epithelial cell | 5.51e-12 | 7 |
hepatocyte | 1.05e-09 | 5 |
endo-epithelial cell | 6.60e-09 | 15 |
M cell of gut | 1.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.87e-16 | 15 |
epithelium of mucosa | 6.76e-16 | 9 |
gastrointestinal system epithelium | 6.76e-16 | 9 |
intestinal epithelium | 6.76e-16 | 9 |
intestinal mucosa | 3.18e-13 | 13 |
wall of intestine | 3.18e-13 | 13 |
gastrointestinal system mucosa | 3.18e-13 | 13 |
simple columnar epithelium | 1.02e-12 | 11 |
organ component layer | 3.09e-09 | 24 |
intestine | 6.92e-08 | 31 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.47e-07 | 3 |
muscle cancer | 1.47e-07 | 3 |