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FFCP PHASE1:Mm9::chr4:135519657..135519675,+: Difference between revisions

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{{FFCP|EntrezGene=74246|HGNC=|MCL_coexpression_id=963|UniProt=B1AV54|association_with_transcript=0bp_to_ENSMUST00000128929,ENSMUST00000149636_5end|description=CAGE_peak_1_at_Gale_5end|id=chr4:135519657..135519675,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.61e-17!43;UBERON:0005409!9.00e-17!59;UBERON:0004119!4.73e-13!130;UBERON:0000925!4.73e-13!130;UBERON:0006595!4.73e-13!130;UBERON:0001007!3.20e-12!128;UBERON:0001555!3.20e-12!128;UBERON:0007026!3.20e-12!128;UBERON:0004921!3.02e-11!126;UBERON:0004185!3.02e-11!126;UBERON:0000344!1.46e-10!15;UBERON:0001242!2.82e-09!13;UBERON:0000060!2.82e-09!13;UBERON:0001262!2.82e-09!13;UBERON:0004786!2.82e-09!13;UBERON:0004923!4.93e-07!24;UBERON:0002108!6.88e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.48e-14,31;UBERON:0005409,5.49e-13,47;UBERON:0000344,1.46e-10,15;UBERON:0004119,1.35e-09,118;UBERON:0000925,1.35e-09,118;UBERON:0006595,1.35e-09,118;UBERON:0001242,2.82e-09,13;UBERON:0001262,2.82e-09,13;UBERON:0004786,2.82e-09,13;UBERON:0001007,6.96e-09,116;UBERON:0001555,6.96e-09,116;UBERON:0007026,6.96e-09,116;UBERON:0004921,4.71e-08,114;UBERON:0004923,4.93e-07,24|phase1_expression=3.04282809499109,130.86577786476,106.014822777762,104.350152900856,119.213183727231,56.407435362395,116.572707657167,2.84071311571468,6.19470377467334,4.91535505276186,3.5955773327356,2.95156988282745,1.71200729931206,1.48614684112296,1.99865857089398,5.66930748691513,2.09868563438444,2.36596624018678,3.01651753932625,2.12194825899015,3.82694805679814,6.85107563286109,8.61959304158487,87.1958704224066,90.8460753025993,109.678305145969,74.0910633393609,82.3100108860096,127.88576129414,69.5603158137409,119.734475753865,6.98533740805594,7.99584223859941,0,33.7956395108991,31.5845826181135,32.8712663582414,8.78916424547506,6.2506827561904,7.32933241563318,5.88231488031014,9.56263678941824,6.311634589405,2.26614272356039,1.11514624341466,0.550640256485045,8.60630478782843,26.1630187656536,21.0898735425093,15.748821825017,27.8572979034471,28.7505128729943,4.36234775750115,2.90144856804538,4.03312558970957,4.11615097657515,7.44986943840768,6.70373719960675,2.63011399117477,7.40587370980846,2.53532561402472,23.041428180701,29.3467282716676,5.84934816232909,6.92206453796882,4.2628806896766,9.58720353658895,8.06858441175265,2.07379224616955,2.29510095163874,2.52389953621658,6.56997264128748,6.18431914664518,2.69479758272899,2.58782771749238,4.5960939330501,3.30347642998166,3.95830748064082,5.37622866396852,3.56092976871523,4.7573574673253,4.68822033501084,6.14202597803038,3.93933827022176,3.66715794664344,2.94628585473668,4.41352210477219,4.65998614563251,11.5861075799772,14.434167980396,2.89864488701678,37.858650587181,9.51959867190851,34.5410042648203,29.2399387851451,5.82434953226536,12.4995533917259,6.30592193538814,5.19572009205738,8.83348936275851,6.4787973097273,5.13305909657271,2.54805239706646,0,44.5971544483101,42.5644573998166,43.9806267162861,13.35951392713,1.8125651855302,3.85949561568544,8.84775166507293,7.00270600117925,3.45923245884088,3.01445281105245,1.64624189989987,6.91166252313215,13.3485282576562,5.20557684911682,2.65383165584962,9.05894359705491,4.19598885074748,6.30337829075789,98.7876334456047,2.92780797011547,1.67557365450764,64.1197208573564,1.55759661857696,2.99951365496704,1.27070227073065,3.59497534571574,4.57500602818627,2.76439574648302,2.9550134432687,3.06858548796397,3.32460871295296,2.92034273521964,2.74966282395854,4.47865094196335,10.867078612648,12.2056276414155,2.47228841629137,2.98872735763515,3.60124259610698,2.86339153887859,1.08858398642125,1.2811372028485,1.96773621575431,4.65666067330228,2.37124792226126,3.02569728268511,6.862093842394,10.7405908889512,6.39508673218875,12.1888258282758,9.4659782747654,3.18454826909589,2.1066395619397,2.83082697826187,2.84163499395593,2.89976081549703,3.98694301967864,3.6012412292203,3.78791576936336,2.75469924446365,2.00547246753592,3.95307706075693,2.68273401399619,0.583826711835847,2.13927804887525,1.64167464079095,0.405344047729279,0.146199987425332,1.97595103761946,0.805238512562231,2.52347938276953,1.54356918568927,69.3879444265976,76.6906643324278,3.19932375802851,3.71578674976702,8.50525244725816,15.5296313959974,16.6783532883653,27.202264534096,38.4368539851054,22.2343588877415,16.5881237808178,13.7279965708394,23.2007263671753,35.0539569375146,49.495613421305,34.6505815462599,2.84501851429623,2.62771579002376,3.38123207019241,2.64746726198909,3.10323979468201,1.75339549725796,2.27651533647326,1.91893192373483,2.19798218977925,1.85095745882701,9.48648406678877,4.67166296005063,8.45203678986773,8.54476027062444,6.8972441272091,11.3353265083636,18.8423130318251,33.0850558068432,8.75530224585191,40.6350891518361,5.75072826109418,23.4448797031157,36.5084077544036,16.9227848224565,46.1051352751314,2.8946611281802,3.32555742299888,4.73728529426212,2.93336957595647,4.07388205860452,5.8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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:74246
|HGNC=
|MCL_coexpression_id=963
|TSSclassifier=NA
|UniProt=uniprot:B1AV54
|association_with_transcript=0bp_to_ENSMUST00000128929,ENSMUST00000149636_5end
|cluster_id=chr4:135519657..135519675,+
|description=CAGE_peak_1_at_Gale_5end
|id=chr4:135519657..135519675,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.48e-14,31;UBERON:0005409,5.49e-13,47;UBERON:0000344,1.46e-10,15;UBERON:0004119,1.35e-09,118;UBERON:0000925,1.35e-09,118;UBERON:0006595,1.35e-09,118;UBERON:0001242,2.82e-09,13;UBERON:0001262,2.82e-09,13;UBERON:0004786,2.82e-09,13;UBERON:0001007,6.96e-09,116;UBERON:0001555,6.96e-09,116;UBERON:0007026,6.96e-09,116;UBERON:0004921,4.71e-08,114;UBERON:0004923,4.93e-07,24
|phase1_expression=3.04282809499109,130.86577786476,106.014822777762,104.350152900856,119.213183727231,56.407435362395,116.572707657167,2.84071311571468,6.19470377467334,4.91535505276186,3.5955773327356,2.95156988282745,1.71200729931206,1.48614684112296,1.99865857089398,5.66930748691513,2.09868563438444,2.36596624018678,3.01651753932625,2.12194825899015,3.82694805679814,6.85107563286109,8.61959304158487,87.1958704224066,90.8460753025993,109.678305145969,74.0910633393609,82.3100108860096,127.88576129414,69.5603158137409,119.734475753865,6.98533740805594,7.99584223859941,0,33.7956395108991,31.5845826181135,32.8712663582414,8.78916424547506,6.2506827561904,7.32933241563318,5.88231488031014,9.56263678941824,6.311634589405,2.26614272356039,1.11514624341466,0.550640256485045,8.60630478782843,26.1630187656536,21.0898735425093,15.748821825017,27.8572979034471,28.7505128729943,4.36234775750115,2.90144856804538,4.03312558970957,4.11615097657515,7.44986943840768,6.70373719960675,2.63011399117477,7.40587370980846,2.53532561402472,23.041428180701,29.3467282716676,5.84934816232909,6.92206453796882,4.2628806896766,9.58720353658895,8.06858441175265,2.07379224616955,2.29510095163874,2.52389953621658,6.56997264128748,6.18431914664518,2.69479758272899,2.58782771749238,4.5960939330501,3.30347642998166,3.95830748064082,5.37622866396852,3.56092976871523,4.7573574673253,4.68822033501084,6.14202597803038,3.93933827022176,3.66715794664344,2.94628585473668,4.41352210477219,4.65998614563251,11.5861075799772,14.434167980396,2.89864488701678,37.858650587181,9.51959867190851,34.5410042648203,29.2399387851451,5.82434953226536,12.4995533917259,6.30592193538814,5.19572009205738,8.83348936275851,6.4787973097273,5.13305909657271,2.54805239706646,0,44.5971544483101,42.5644573998166,43.9806267162861,13.35951392713,1.8125651855302,3.85949561568544,8.84775166507293,7.00270600117925,3.45923245884088,3.01445281105245,1.64624189989987,6.91166252313215,13.3485282576562,5.20557684911682,2.65383165584962,9.05894359705491,4.19598885074748,6.30337829075789,98.7876334456047,2.92780797011547,1.67557365450764,64.1197208573564,1.55759661857696,2.99951365496704,1.27070227073065,3.59497534571574,4.57500602818627,2.76439574648302,2.9550134432687,3.06858548796397,3.32460871295296,2.92034273521964,2.74966282395854,4.47865094196335,10.867078612648,12.2056276414155,2.47228841629137,2.98872735763515,3.60124259610698,2.86339153887859,1.08858398642125,1.2811372028485,1.96773621575431,4.65666067330228,2.37124792226126,3.02569728268511,6.862093842394,10.7405908889512,6.39508673218875,12.1888258282758,9.4659782747654,3.18454826909589,2.1066395619397,2.83082697826187,2.84163499395593,2.89976081549703,3.98694301967864,3.6012412292203,3.78791576936336,2.75469924446365,2.00547246753592,3.95307706075693,2.68273401399619,0.583826711835847,2.13927804887525,1.64167464079095,0.405344047729279,0.146199987425332,1.97595103761946,0.805238512562231,2.52347938276953,1.54356918568927,69.3879444265976,76.6906643324278,3.19932375802851,3.71578674976702,8.50525244725816,15.5296313959974,16.6783532883653,27.202264534096,38.4368539851054,22.2343588877415,16.5881237808178,13.7279965708394,23.2007263671753,35.0539569375146,49.495613421305,34.6505815462599,2.84501851429623,2.62771579002376,3.38123207019241,2.64746726198909,3.10323979468201,1.75339549725796,2.27651533647326,1.91893192373483,2.19798218977925,1.85095745882701,9.48648406678877,4.67166296005063,8.45203678986773,8.54476027062444,6.8972441272091,11.3353265083636,18.8423130318251,33.0850558068432,8.75530224585191,40.6350891518361,5.75072826109418,23.4448797031157,36.5084077544036,16.9227848224565,46.1051352751314,2.8946611281802,3.32555742299888,4.73728529426212,2.93336957595647,4.07388205860452,5.86725620721255,6.365237782789,4.99891645860629,4.48807390072937,2.52216230569906,1.99318220683897,3.34855014180723,3.60499292374624,3.9717545829156,2.60368305446721,1.50791283939272,4.89515115436839,57.0446556702082,23.730560182207,2.40825884981688,2.10981035865966,2.29508923527346,2.52470927204373,5.36363973007636,6.63745865304285,3.01592756825919,5.73525115086125,5.34716817797746,4.24614796183249,4.45291771842384,5.55286130031493,4.34816555741176,2.89189184779626,4.68402281187286,5.1639025063504,1.62886959353576,4.78413356620353,19.9117707509944,4.12727081463468,12.3952658355548,38.0982261106914,44.5905858249967,39.0442637888788,15.247269296925,11.9966130727577,13.1904030002347,29.3914184880309,30.5713964867496,14.4389760547462,12.2558258071364,3.06103859853227,4.78627129996192,5.35842587578981,3.01478397191865,2.49716344642899,4.93647061806363,4.26250928760439,36.3741147498751,31.5629785587092,18.9654422327267,7.91454014119104,1.61464426695906,6.21223126760005,6.08798954415996,4.76008609260678,34.6862195589522,2.59595422814714,3.93003025835061,5.98521917093345,3.88908507476395,1.88368457004691,2.32380187125743,3.20289442489132,2.03974115992626,1.81936888020755,2.07299960706636,52.5068839908312,2.68885594543965,8.94605655358134,16.848833168201,23.208800857606,37.3399984005964,29.4004275118909,26.1184920092062,45.0220220212531,65.3259465390636,22.9895545842163,1.12738587736838,4.78452947340732,5.29467169462712,2.52786544847262,5.16639293910924,2.53434188236167,1.17357238645754,2.3436789271911,3.25063967719704,0.966336483304024,0.288030006257865,2.8441000856536,7.50083296573608,5.85452455839515,6.23619950293416,7.6981479137017,5.36439657909415,4.44723163223885,3.39685912501528,3.83672509802961,4.19137436602499,4.63800451629466,2.82627854145282,3.07877893249054,2.22066114144981,7.25537227568676,11.9872414821995,14.892500197173,35.4236540528206,5.21611903886914,18.3928825942158,15.5678880627175,7.07415650960917,15.0471631210609,5.64751842617067,6.90487854760765,1.71868654031819,4.1244763762485,3.42541259885321,3.0215755895588,4.05013500139084,4.05289082901798,4.98456649882625,4.65984280576638,2.80225838477277,3.19219898720825,4.09760653809922,7.53630822911712,7.75568701723535,10.2952364732008,11.7790765734856,13.3922787205281,13.7995260124481,9.6024940470243,8.61829619626815,10.7517014590063,9.64507526939789,10.3720746895888,7.17943361945166,14.2888107384922,10.5454736609819,9.06673336179414,14.835092428919,11.481515770483,14.4005086001874,14.0205886865877,11.6833733074187,11.7730597472186,10.6343599869324,10.5768259864596,10.426894453748,13.41655528333,9.77789619690205,14.5896990631012,9.96534152243063,9.1609168609274,18.8246279858057,7.59190521811233,9.64533054905707,8.24374907195222,10.292990771598,7.09074478359384,6.12122662620299,9.48543102213917,8.81097775357602
|short_description=p1@Gale
}}

Revision as of 23:23, 4 August 2015

Short description:p1@Gale
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gale_5end
Coexpression cluster:MCL_coexpression_mm9:963
Association with transcript: 0bp_to_ENSMUST00000128929, ENSMUST00000149636_5end
EntrezGene:74246
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gale

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.04
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5130.87
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6106.01
CD326+ enterocyte, pool1.CNhs13542.11848-124I3104.35
CD326+ enterocyte, pool2.CNhs13197.11849-124I4119.21
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I756.41
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8116.57
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.19
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.92
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.60
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.95
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.71
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.49
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.67
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.37
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.02
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.83
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I98.62
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D187.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D290.85
GP2+ M cell, pool1.CNhs13228.11845-124H9109.68
GP2+ M cell, pool2.CNhs13231.11846-124I174.09
GP2+ M cell, pool3.CNhs13240.11847-124I282.31
Ileum epithelium, pool1.CNhs13199.10252-104B9127.89
Ileum epithelium, pool2.CNhs13232.10253-104C169.56
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8119.73
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F533.80
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F631.58
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F732.87
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G88.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H37.33
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H29.56
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.31
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.12
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B78.61
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C226.16
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B821.09
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C315.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C427.86
Mouse Astrocytes, donor3.CNhs12107.11633-122C428.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.36
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.03
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.12
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E17.45
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.70
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C623.04
Mouse Meningeal cells, donor3.CNhs12109.11639-122D129.35
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C89.59
Mouse Microglia, donor2.CNhs12634.11736-123E88.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.07
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.18
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.59
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.76
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.66
Mouse Schwann, donor1.CNhs12507.11728-123D911.59
Mouse Schwann, donor2.CNhs12573.11746-123F914.43
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F737.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C49.52
Mouse hepatocyte, donor3.CNhs12615.11637-122C834.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F429.24
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A712.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.31
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.48
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G144.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G242.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G343.98
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.36
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D73.86
adrenal gland, embryo E14.CNhs11038.406-44C58.85
adrenal gland, embryo E16.CNhs11004.1254-43D67.00
adrenal gland, embryo E17.CNhs11043.1263-45I13.46
adrenal gland, embryo E18.CNhs11026.1262-18F53.01
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I36.91
amnion, adult pregnant day17.5.CNhs10488.583-22A813.35
aorta, adult.CNhs10498.46-23H15.21
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F59.06
bone (os femoris), neonate N16.CNhs11225.1525-43A64.20
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H498.79
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H764.12
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.56
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A43.59
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B22.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.75
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.48
epididymis, adult.CNhs10490.58-23B210.87
eyeball, adult.CNhs10484.31-12G412.21
eyeball, embryo E12.CNhs11016.345-16C62.47
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C93.60
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.97
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E26.86
forelimb, embryo E14.CNhs10577.413-26A810.74
forelimb, embryo E15.CNhs11007.437-20E76.40
forelimb, embryo E17.CNhs10598.1517-43C412.19
forelimb, embryo E18.CNhs11008.1520-43B59.47
gonad, embryo E13.CNhs11044.1564-45I63.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.83
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.84
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F53.99
heart, embryo E13.CNhs11013.376-3I93.60
heart, embryo E14.CNhs10597.403-26D43.79
heart, embryo E15.CNhs11017.431-16C82.75
heart, embryo E16.CNhs11021.457-17C62.01
heart, embryo E17.CNhs11025.479-18E53.95
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I22.14
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G11.54
intestinal mucosa, adult.CNhs10506.860-29I369.39
intestine, adult.CNhs10496.178-9A376.69
intestine, embryo E12.CNhs11019.1251-16I53.20
intestine, embryo E13.CNhs11010.381-16D53.72
intestine, embryo E15.CNhs10602.976-16D88.51
intestine, embryo E16.CNhs10585.463-22H415.53
intestine, embryo E17.CNhs10582.482-18D316.68
intestine, embryo E18.CNhs10526.1289-20F727.20
intestine, neonate N00.CNhs11126.644-26D138.44
intestine, neonate N01.CNhs11192.1322-23E922.23
intestine, neonate N06.CNhs11102.688-20B816.59
intestine, neonate N07.CNhs11095.720-20F213.73
intestine, neonate N10.CNhs11098.755-23A523.20
intestine, neonate N20.CNhs11187.827-18D135.05
intestine, neonate N25.CNhs11121.1352-25E349.50
intestine, neonate N30.CNhs11131.1384-42G134.65
kidney, embryo E14.CNhs10606.411-4I92.85
kidney, embryo E15.CNhs10997.434-16F82.63
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C73.10
kidney, neonate N00.CNhs11214.646-21G71.75
kidney, neonate N10.CNhs11206.758-6D52.28
kidney, neonate N20.CNhs11113.832-19I11.92
kidney, neonate N25.CNhs11122.1353-25F32.20
kidney, neonate N30.CNhs11203.1385-42H11.85
liver, adult pregnant day01.CNhs10466.508-5B29.49
liver, embryo E12.CNhs10601.355-15F84.67
liver, embryo E13.CNhs10524.378-3H68.45
liver, embryo E14.CNhs10594.409-16E18.54
liver, embryo E15.CNhs10520.433-16D76.90
liver, embryo E16.CNhs10523.462-17F511.34
liver, embryo E17.CNhs10510.481-18A318.84
liver, embryo E18.CNhs10579.499-43G433.09
liver, neonate N00.CNhs11117.641-24F48.76
liver, neonate N03.CNhs11123.1345-25G240.64
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H223.44
liver, neonate N10.CNhs11115.751-24B936.51
liver, neonate N20.CNhs11220.823-25A316.92
liver, neonate N25.CNhs11198.1368-26H146.11
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B13.33
lung, embryo E12.CNhs10522.354-16G24.74
lung, embryo E14.CNhs10604.404-26F82.93
lung, embryo E15.CNhs11020.432-17C54.07
lung, embryo E16.CNhs10998.458-17B65.87
lung, embryo E17.CNhs10605.480-44A66.37
lung, embryo E18.CNhs10583.1287-20I65.00
lung, neonate N00.CNhs11224.640-42C64.49
lung, neonate N06.CNhs11212.683-20E52.52
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E63.35
lung, neonate N20.CNhs11109.822-18A43.60
lung, neonate N25.CNhs11119.1359-25C73.97
lung, neonate N30.CNhs11133.1394-42H22.60
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.90
mammary gland, adult lactating day02.CNhs10480.595-22B657.04
mammary gland, adult pregnant day19.CNhs10476.588-5H223.73
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A32.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.30
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.64
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.74
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.35
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.55
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I74.68
ovary, embryo E18.CNhs11040.505-44H75.16
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G64.78
pancreas, adult.CNhs10486.34-16E419.91
pancreas, embryo E14.CNhs11012.405-44F44.13
pancreas, embryo E15.CNhs11042.1556-45F212.40
pancreas, embryo E16.CNhs11003.460-26E538.10
pancreas, embryo E17.CNhs10599.1558-45G344.59
pancreas, embryo E18.CNhs10580.1535-43I739.04
pancreas, neonate N00.CNhs11105.645-26G915.25
pancreas, neonate N01.CNhs11138.1531-43D712.00
pancreas, neonate N02.CNhs11139.1539-43D813.19
pancreas, neonate N16.CNhs11136.787-43B629.39
pancreas, neonate N25.CNhs11094.1555-45E230.57
pancreas, neonate N30.CNhs11182.1548-44H514.44
pituitary gland, adult.CNhs10493.21-1G812.26
pituitary gland, embryo E12.CNhs11018.346-16E63.06
pituitary gland, embryo E13.CNhs11009.370-44C74.79
pituitary gland, embryo E14.CNhs11037.398-44A55.36
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F62.50
pituitary gland, embryo E17.CNhs11039.1265-44F54.94
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I736.37
placenta, adult pregnant day17.CNhs10464.577-18G331.56
prostate, adult.CNhs10470.859-1F818.97
skin, adult.CNhs10492.30-1C37.91
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H36.21
skin, neonate N06.CNhs11097.693-20I56.09
skin, neonate N10.CNhs11108.762-6C44.76
small intestine, neonate N16.CNhs11114.790-21I134.69
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G23.93
spleen, embryo E16.CNhs11035.461-43C15.99
spleen, embryo E18.CNhs11011.1271-21F23.89
spleen, neonate N10.CNhs11116.752-24D11.88
spleen, neonate N20.CNhs11112.824-19H12.32
spleen, neonate N25.CNhs11099.1354-25G33.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.07
stomach, adult.CNhs10503.33-1H652.51
stomach, embryo E12.CNhs10588.356-43E32.69
stomach, embryo E15.CNhs10603.1252-16G88.95
stomach, embryo E16.CNhs11022.459-17D416.85
stomach, embryo E17.CNhs11006.1035-18D523.21
stomach, embryo E18.CNhs10999.1286-20C637.34
stomach, neonate N03.CNhs11193.1340-24B829.40
stomach, neonate N07.CNhs11210.718-18A926.12
stomach, neonate N25.CNhs11104.1355-25E445.02
stomach, neonate N30.CNhs11134.1386-42I165.33
submandibular gland, adult.CNhs10469.59-29C122.99
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F54.78
testis, embryo E15.CNhs11034.443-27C55.29
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I55.17
testis, embryo E18.CNhs11027.503-18G52.53
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I42.34
testis, neonate N10.CNhs11204.763-44D93.25
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I47.50
thymus, embryo E15.CNhs11005.430-45I25.85
thymus, embryo E16.CNhs11002.456-26C56.24
thymus, embryo E17.CNhs10581.478-18C17.70
thymus, embryo E18.CNhs10595.1273-19G45.36
thymus, neonate N02.CNhs11181.1541-43F84.45
thymus, neonate N03.CNhs11137.2104-43C73.40
thymus, neonate N06.CNhs11197.681-26C43.84
thymus, neonate N07.CNhs11211.713-19D34.19
thymus, neonate N10.CNhs11194.748-24E44.64
thymus, neonate N20.CNhs11186.820-7A22.83
thymus, neonate N25.CNhs11125.1362-25G73.08
thymus, neonate N30.CNhs11132.1393-42G22.22
tongue, adult.CNhs10499.32-1B47.26
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H311.99
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F714.89
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G535.42
urinary bladder, adult.CNhs10481.879-12E45.22
uterus, adult pregnant day19.CNhs10497.590-15F518.39
uterus, adult.CNhs10509.92-27E515.57
vagina, adult.CNhs10502.89-27D57.07
vesicular gland, adult.CNhs10491.51-27F815.05
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I82.80
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H24.10
whole body, embryo E14.5.CNhs10578.420-27D27.54
whole body, embryo E14.CNhs10519.395-14B17.76
whole body, embryo E16.CNhs10514.453-14F210.30
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G513.39
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G513.80
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.60
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.62
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.65
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G510.37
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.18
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G514.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G514.84
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.48
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G511.68
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.77
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.63
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.58
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.43
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.78
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G514.59
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.97
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.16
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G518.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.59
whole body, embryo E17.5.CNhs10513.490-9F99.65
whole body, embryo E17.CNhs10517.475-3I58.24
whole body, embryo E18.CNhs10516.493-3B310.29
whole body, neonate N00.CNhs10525.657-19C27.09
whole body, neonate N01.CNhs10576.659-23C66.12
whole body, neonate N06.CNhs10515.692-21D19.49
whole body, neonate N10.CNhs10518.761-6B48.81





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine5.48e-1431
gastrointestinal system5.49e-1347
mucosa1.46e-1015
endoderm-derived structure1.35e-09118
endoderm1.35e-09118
presumptive endoderm1.35e-09118
intestinal mucosa2.82e-0913
wall of intestine2.82e-0913
gastrointestinal system mucosa2.82e-0913
digestive system6.96e-09116
digestive tract6.96e-09116
primitive gut6.96e-09116
subdivision of digestive tract4.71e-08114
organ component layer4.93e-0724
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