FFCP PHASE1:Mm9::chr7:30032945..30032958,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=195 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:30032945..30032958,- | |||
|description=CAGE_peak_at_chr7:30032945..30032958,- | |description=CAGE_peak_at_chr7:30032945..30032958,- | ||
|id=chr7:30032945..30032958,- | |id=chr7:30032945..30032958,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,8.08e-07,3;CL:0002202,8.08e-07,3;CL:0000069,8.08e-07,3;CL:0002632,8.08e-07,3;CL:0002368,8.08e-07,3;CL:0000307,8.08e-07,3;CL:0000377,8.08e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!4.80e-10!128;UBERON:0001555!4.80e-10!128;UBERON:0007026!4.80e-10!128;UBERON:0005409!1.09e-09!59;UBERON:0004119!1.76e-09!130;UBERON:0000925!1.76e-09!130;UBERON:0006595!1.76e-09!130;UBERON:0004921!4.40e-09!126;UBERON:0004185!4.40e-09!126;UBERON:0000160!5.55e-08!43;UBERON:0000344!1.31e-07!15;UBERON:0004923!3.62e-07!24 | |ontology_enrichment_uberon=UBERON:0001007!4.80e-10!128;UBERON:0001555!4.80e-10!128;UBERON:0007026!4.80e-10!128;UBERON:0005409!1.09e-09!59;UBERON:0004119!1.76e-09!130;UBERON:0000925!1.76e-09!130;UBERON:0006595!1.76e-09!130;UBERON:0004921!4.40e-09!126;UBERON:0004185!4.40e-09!126;UBERON:0000160!5.55e-08!43;UBERON:0000344!1.31e-07!15;UBERON:0004923!3.62e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.78e-24,31;UBERON:0005409,1.04e-19,47;UBERON:0001007,9.01e-17,116;UBERON:0001555,9.01e-17,116;UBERON:0007026,9.01e-17,116;UBERON:0004119,2.39e-16,118;UBERON:0000925,2.39e-16,118;UBERON:0006595,2.39e-16,118;UBERON:0004921,1.45e-14,114;UBERON:0000344,6.10e-13,15;UBERON:0001242,1.77e-09,13;UBERON:0001262,1.77e-09,13;UBERON:0004786,1.77e-09,13;UBERON:0004923,8.36e-09,24;UBERON:0002108,9.97e-09,4;UBERON:0003126,8.08e-07,3;UBERON:0001005,8.08e-07,3;UBERON:0007196,8.08e-07,3;UBERON:0001558,8.08e-07,3 | |||
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|phase1_expression=0,2.79180326111489,0.909998478779072,3.62957053568196,1.00179145989269,0.839396359559449,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,4.63978026100879,3.21172993494038,0.57423196411502,0.86152399231815,1.939241094173,3.42042155021473,1.00812051903972,1.33038306393183,0,0,0,0.866554859253824,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0.782391344348039,0,0.439372365468944,0,0.55994568650145,0,0,0,0,0.257259436035947,1.14613375975503,1.54701627683233,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427115042397309,0,0.075726193333184,0.0755715601067855,0.289864488701678,0.860423876981386,0,0,0.649776417447669,1.34408066129201,0.140444420131752,0,0,0,0.14084341977668,0,0,0,1.5154372870785,1.77351905832569,1.51657333504435,1.02765491747154,0,0,0.520455980298408,0.608930956624282,0.230615497256059,0,0.470354828542819,0,0.741584903203122,0.433798070759735,0.884610551949874,0,0.441683036920787,0,13.0474232852686,0,0,6.38642638021478,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.622034853050465,0.505445516867349,0,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0.720248245844059,0,0,0.154267112887378,0.930135779001631,0,0,0,0.492502392237286,0.243206428637567,0.146199987425332,0,0.134206418760372,0,0,8.92130714056255,4.7601101999438,0,0,0.38660238396628,0.201683524623343,0,0.380451252225118,2.84717436926707,1.31759163779209,2.26201687920243,1.1937388322469,1.75467678407208,2.69645822596266,4.10662294761919,5.37681437786791,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.280543279561274,0.505892296994058,0.590440591918409,0.31399745568275,0.493588655687202,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0.372140947668503,0.624075346229121,1.01031551178845,0.179397413521912,0,0.184753190166605,0,0.325929952884052,0.169745085775188,1.40814148973101,1.00503754465089,1.90434912708811,0.780534591431195,1.57635144106191,1.10732344824387,0.797273843287435,0.983179888294428,0,0.289298117163023,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0,0.325773918707152,2.63952196756057,0,0.242780636154981,0,0.188605079755898,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0.658196082408484,0.304464949114599,0,0,0.220528398054962,0.49465875882444,0.161464426695906,0.0603129249281559,0.119372344003136,0.328281799490123,3.20628920292836,0,0.170870880797853,0,0.370389054739423,1.13021074202815,0.410082683163076,0.686334519619568,0,0,0,0,0,0.406638934253697,0.108005340821801,1.04544148007234,0,0.404593039154462,0.41326727862668,0.523511883968059,5.57344385154709,0,0,0.149516546043979,0,0,0.129159823477731,0.506868376472335,0.117357238645754,0.13020438484395,0,0,0,0.316011120628178,0,0.102710957164827,0.25984164595559,0,0,0.120195449519969,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.292373642219257,0.192423683280659,0.116876902181569,0.226730383615211,0,0.448569283047378,0,5.21611903886914,0.187682475451182,1.83151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.367687016900028,0.666740183404846,0.412070114477788,0,0.252697211763798,0.50695859978048,0.754505365544305,0.468207537349412,0.128050304809739,0.287177344778066,0,0.115884325944855,0.192909220463705,0.824171801606613,0,0.685738504770831,0,0,0.145346416632329,0.470546902076653,0.169229215783353,0,0.263069711437843,0.407412341537585,1.12228454331548,0.118635018124174,0,0,0,0,0.249810577937946,0,0,0.382576664137687,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr7:30032945..30032958,- | |short_description=p@chr7:30032945..30032958,- | ||
}} | }} |
Latest revision as of 00:03, 5 August 2015
Short description: | p@chr7:30032945..30032958, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:30032945..30032958, - |
Coexpression cluster: | MCL_coexpression_mm9:195 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 8.08e-07 | 3 |
epithelial cell of tracheobronchial tree | 8.08e-07 | 3 |
branched duct epithelial cell | 8.08e-07 | 3 |
epithelial cell of lower respiratory tract | 8.08e-07 | 3 |
respiratory epithelial cell | 8.08e-07 | 3 |
tracheal epithelial cell | 8.08e-07 | 3 |
tracheoblast | 8.08e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.78e-24 | 31 |
gastrointestinal system | 1.04e-19 | 47 |
digestive system | 9.01e-17 | 116 |
digestive tract | 9.01e-17 | 116 |
primitive gut | 9.01e-17 | 116 |
endoderm-derived structure | 2.39e-16 | 118 |
endoderm | 2.39e-16 | 118 |
presumptive endoderm | 2.39e-16 | 118 |
subdivision of digestive tract | 1.45e-14 | 114 |
mucosa | 6.10e-13 | 15 |
intestinal mucosa | 1.77e-09 | 13 |
wall of intestine | 1.77e-09 | 13 |
gastrointestinal system mucosa | 1.77e-09 | 13 |
organ component layer | 8.36e-09 | 24 |
small intestine | 9.97e-09 | 4 |
trachea | 8.08e-07 | 3 |
respiratory airway | 8.08e-07 | 3 |
tracheobronchial tree | 8.08e-07 | 3 |
lower respiratory tract | 8.08e-07 | 3 |