FFCP PHASE1:Mm9::chr10:88202891..88202898,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=457 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:88202891..88202898,+ | |||
|description=CAGE_peak_at_chr10:88202891..88202898,+ | |description=CAGE_peak_at_chr10:88202891..88202898,+ | ||
|id=chr10:88202891..88202898,+ | |id=chr10:88202891..88202898,+ | ||
|ontology_enrichment_celltype=CL:0000239!4.96e-09!6;CL:0000677!4.96e-09!6;CL:0000212!4.96e-09!6;CL:0000584!4.96e-09!6;CL:0000473!4.61e-08!3;CL:0000627!4.61e-08!3;CL:0000682!4.61e-08!3;CL:0000075!1.13e-07!7 | |ontology_enrichment_celltype=CL:0000239!4.96e-09!6;CL:0000677!4.96e-09!6;CL:0000212!4.96e-09!6;CL:0000584!4.96e-09!6;CL:0000473!4.61e-08!3;CL:0000627!4.61e-08!3;CL:0000682!4.61e-08!3;CL:0000075!1.13e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,3.30e-18,3;CL:0000239,1.22e-08,6;CL:0000677,1.22e-08,6;CL:0000584,1.22e-08,6;CL:0000473,4.20e-08,7;CL:0000066,1.01e-07,25;CL:0000075,1.77e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.97e-18!59;UBERON:0000160!3.21e-17!43;UBERON:0000344!2.24e-13!15;UBERON:0001242!5.20e-10!13;UBERON:0000060!5.20e-10!13;UBERON:0001262!5.20e-10!13;UBERON:0004786!5.20e-10!13;UBERON:0001007!1.11e-08!128;UBERON:0001555!1.11e-08!128;UBERON:0007026!1.11e-08!128;UBERON:0004119!1.96e-08!130;UBERON:0000925!1.96e-08!130;UBERON:0006595!1.96e-08!130;UBERON:0000331!5.95e-08!3;UBERON:0002116!5.95e-08!3;UBERON:0001204!5.95e-08!3;UBERON:0001168!5.95e-08!3;UBERON:0004923!1.60e-07!24;UBERON:0004921!3.16e-07!126;UBERON:0004185!3.16e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.12e-22,15;UBERON:0000331,6.33e-18,3;UBERON:0002116,6.33e-18,3;UBERON:0001204,6.33e-18,3;UBERON:0001168,6.33e-18,3;UBERON:0001242,4.42e-15,13;UBERON:0001262,4.42e-15,13;UBERON:0004786,4.42e-15,13;UBERON:0004923,7.11e-14,24;UBERON:0002108,1.36e-13,4;UBERON:0000160,2.29e-13,31;UBERON:0001962,1.06e-11,2;UBERON:0001961,1.06e-11,2;UBERON:0001744,1.06e-11,2;UBERON:0005409,1.54e-10,47;UBERON:0002465,4.26e-08,3 | |||
|phase1_expression=0,1.39590163055744,2.27499619694768,0.30246421130683,0,0.839396359559449,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,1.83527424853736,5.7423196411502,7.32295393470427,5.817723282519,3.23039813075836,3.52842181663903,23.0599731081517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0.766371165625774,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.444756087689741,0.190225626112559,0.474529061544512,0.329397909448022,0.502670417600539,0.596869416123452,0.779856348476481,0,1.94524244887225,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0.944050424693745,0.247960367176008,0,4.40690909192096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295379054349154,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,1.64836461840539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0.294397840268795,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.39590163055744,2.27499619694768,0.30246421130683,0,0.839396359559449,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,1.83527424853736,5.7423196411502,7.32295393470427,5.817723282519,3.23039813075836,3.52842181663903,23.0599731081517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,0.766371165625774,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.444756087689741,0.190225626112559,0.474529061544512,0.329397909448022,0.502670417600539,0.596869416123452,0.779856348476481,0,1.94524244887225,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0.944050424693745,0.247960367176008,0,4.40690909192096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295379054349154,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,1.64836461840539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0.294397840268795,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:88202891..88202898,+ | |short_description=p@chr10:88202891..88202898,+ | ||
}} | }} |
Latest revision as of 00:12, 5 August 2015
Short description: | p@chr10:88202891..88202898, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:88202891..88202898, + |
Coexpression cluster: | MCL_coexpression_mm9:457 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 3.30e-18 | 3 |
brush border epithelial cell | 1.22e-08 | 6 |
gut absorptive cell | 1.22e-08 | 6 |
enterocyte | 1.22e-08 | 6 |
defensive cell | 4.20e-08 | 7 |
epithelial cell | 1.01e-07 | 25 |
columnar/cuboidal epithelial cell | 1.77e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.12e-22 | 15 |
ileal mucosa | 6.33e-18 | 3 |
ileum | 6.33e-18 | 3 |
mucosa of small intestine | 6.33e-18 | 3 |
wall of small intestine | 6.33e-18 | 3 |
intestinal mucosa | 4.42e-15 | 13 |
wall of intestine | 4.42e-15 | 13 |
gastrointestinal system mucosa | 4.42e-15 | 13 |
organ component layer | 7.11e-14 | 24 |
small intestine | 1.36e-13 | 4 |
intestine | 2.29e-13 | 31 |
gut-associated lymphoid tissue | 1.06e-11 | 2 |
mucosa-associated lymphoid tissue | 1.06e-11 | 2 |
lymphoid tissue | 1.06e-11 | 2 |
gastrointestinal system | 1.54e-10 | 47 |
lymphoid system | 4.26e-08 | 3 |