FFCP PHASE1:Mm9::chr6:120953117..120953152,-: Difference between revisions
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{{FFCP|EntrezGene=100505050|HGNC=|MCL_coexpression_id=112|UniProt=D3Z2R0|association_with_transcript=17bp_to_ENSMUST00000098457_5end|description=CAGE_peak_1_at_LOC100505050_5end|id=chr6:120953117..120953152,-|ontology_enrichment_celltype=CL:0000107!2.06e-10!9;CL:0000221!1.33e-08!44;CL:0000133!1.33e-08!44;CL:0000540!2.01e-08!33;CL:0000047!2.01e-08!33;CL:0000031!2.01e-08!33;CL:0000404!2.01e-08!33;CL:0002319!7.44e-08!43|ontology_enrichment_celltype_v019_2=CL:0000217,1.05e-14,2;CL:0000328,1.05e-14,2;CL:0002573,1.05e-14,2;CL:0002376,1.05e-14,2;CL:0000218,1.05e-14,2;CL:0000692,1.05e-14,2;CL:0002377,1.05e-14,2;CL:0002375,1.05e-14,2;CL:0000107,1.25e-12,9;CL:0000221,8.98e-12,44;CL:0000133,8.98e-12,44;CL:0000215,4.07e-10,3;CL:0002319,1.69e-09,43;CL:0000710,2.98e-08,1;CL:0002077,2.98e-08,1;CL:0005014,2.98e-08,1;CL:0002315,2.98e-08,1;CL:0002490,2.98e-08,1;CL:0000540,3.55e-07,33;CL:0000047,3.55e-07,33;CL:0000031,3.55e-07,33;CL:0000404,3.55e-07,33;CL:0002321,4.67e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!3.25e-15!102;UBERON:0000924!3.25e-15!102;UBERON:0006601!3.25e-15!102;UBERON:0000010!9.82e-13!11;UBERON:0002410!2.06e-10!9;UBERON:0000073!1.55e-09!75;UBERON:0001016!1.55e-09!75;UBERON:0001017!3.21e-08!73;UBERON:0005743!3.21e-08!73;UBERON:0002240!4.03e-07!6;UBERON:0005174!4.03e-07!6;UBERON:0001137!4.03e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000010,2.36e-22,11;UBERON:0000011,1.78e-21,3;UBERON:0001896,3.13e-14,2;UBERON:0002298,3.13e-14,2;UBERON:0005290,3.13e-14,2;UBERON:0010096,3.13e-14,2;UBERON:0003076,5.12e-14,12;UBERON:0003057,5.12e-14,12;UBERON:0002410,1.25e-12,9;UBERON:0002240,8.77e-11,6;UBERON:0005174,8.77e-11,6;UBERON:0001137,8.77e-11,6;UBERON:0001016,6.10e-10,75;UBERON:0004121,3.22e-09,95;UBERON:0000924,3.22e-09,95;UBERON:0006601,3.22e-09,95|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,1.98781686856452,0,0,0,0,0.638436690425939,0.614426133024974,0,0,0,0.279182999001381,0,0.30559649555362,1.17851434189467,0.711858403995515,0.186399445825301,1.4387976733305,10.1265890543093,0,0,0,0,0,0,0,0,0,0,2.53518155598025,0,0,0,0,0,0,0,0,0,0,0,0.461230994512117,0.150722640552623,0.23517741427141,0,0,0,0,0.323533699894818,0.220841518460394,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,0,0.173824320192276,0,0.62336413367868,0.648965052271031,0,0,0,0.841767423545896,0,0,0,0.150704817835715,0.204109497453984,0.12811372028485,0.281105173679186,0.776110112217047,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0.289298117163023,0,0,0,0,1.44495530989013,1.64096361229084,0,0.504941854408746,0.315508219416257,0.390438744296638,0.430846795465598,2.38968797952552,3.11918143715352,2.83076530788832,2.42886421004937,0.584511715822624,0.395287777946524,0.321321316421807,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0.23467170806371,0,0,0.98931751764888,0.484393280087717,0.0603129249281559,0.119372344003136,0.164140899745061,0,3.15223013417866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0.906921534460845,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0.25347929989024,0,0.37456602987953,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0.526139422875686,0,0,0,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0.191288332068843,1.10295709559758,0|short_description=p1@LOC100505050}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:100505050 | |||
|HGNC= | |||
|MCL_coexpression_id=112 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3Z2R0 | |||
|association_with_transcript=17bp_to_ENSMUST00000098457_5end | |||
|cluster_id=chr6:120953117..120953152,- | |||
|description=CAGE_peak_1_at_LOC100505050_5end | |||
|id=chr6:120953117..120953152,- | |||
|ontology_enrichment_celltype=CL:0000107!2.06e-10!9;CL:0000221!1.33e-08!44;CL:0000133!1.33e-08!44;CL:0000540!2.01e-08!33;CL:0000047!2.01e-08!33;CL:0000031!2.01e-08!33;CL:0000404!2.01e-08!33;CL:0002319!7.44e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000217,1.05e-14,2;CL:0000328,1.05e-14,2;CL:0002573,1.05e-14,2;CL:0002376,1.05e-14,2;CL:0000218,1.05e-14,2;CL:0000692,1.05e-14,2;CL:0002377,1.05e-14,2;CL:0002375,1.05e-14,2;CL:0000107,1.25e-12,9;CL:0000221,8.98e-12,44;CL:0000133,8.98e-12,44;CL:0000215,4.07e-10,3;CL:0002319,1.69e-09,43;CL:0000710,2.98e-08,1;CL:0002077,2.98e-08,1;CL:0005014,2.98e-08,1;CL:0002315,2.98e-08,1;CL:0002490,2.98e-08,1;CL:0000540,3.55e-07,33;CL:0000047,3.55e-07,33;CL:0000031,3.55e-07,33;CL:0000404,3.55e-07,33;CL:0002321,4.67e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.25e-15!102;UBERON:0000924!3.25e-15!102;UBERON:0006601!3.25e-15!102;UBERON:0000010!9.82e-13!11;UBERON:0002410!2.06e-10!9;UBERON:0000073!1.55e-09!75;UBERON:0001016!1.55e-09!75;UBERON:0001017!3.21e-08!73;UBERON:0005743!3.21e-08!73;UBERON:0002240!4.03e-07!6;UBERON:0005174!4.03e-07!6;UBERON:0001137!4.03e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,2.36e-22,11;UBERON:0000011,1.78e-21,3;UBERON:0001896,3.13e-14,2;UBERON:0002298,3.13e-14,2;UBERON:0005290,3.13e-14,2;UBERON:0010096,3.13e-14,2;UBERON:0003076,5.12e-14,12;UBERON:0003057,5.12e-14,12;UBERON:0002410,1.25e-12,9;UBERON:0002240,8.77e-11,6;UBERON:0005174,8.77e-11,6;UBERON:0001137,8.77e-11,6;UBERON:0001016,6.10e-10,75;UBERON:0004121,3.22e-09,95;UBERON:0000924,3.22e-09,95;UBERON:0006601,3.22e-09,95 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,1.98781686856452,0,0,0,0,0.638436690425939,0.614426133024974,0,0,0,0.279182999001381,0,0.30559649555362,1.17851434189467,0.711858403995515,0.186399445825301,1.4387976733305,10.1265890543093,0,0,0,0,0,0,0,0,0,0,2.53518155598025,0,0,0,0,0,0,0,0,0,0,0,0.461230994512117,0.150722640552623,0.23517741427141,0,0,0,0,0.323533699894818,0.220841518460394,0,0,0,0,0,0,0,0,0.149790639404823,0.457500602818626,0,0.173824320192276,0,0.62336413367868,0.648965052271031,0,0,0,0.841767423545896,0,0,0,0.150704817835715,0.204109497453984,0.12811372028485,0.281105173679186,0.776110112217047,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0.289298117163023,0,0,0,0,1.44495530989013,1.64096361229084,0,0.504941854408746,0.315508219416257,0.390438744296638,0.430846795465598,2.38968797952552,3.11918143715352,2.83076530788832,2.42886421004937,0.584511715822624,0.395287777946524,0.321321316421807,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0.23467170806371,0,0,0.98931751764888,0.484393280087717,0.0603129249281559,0.119372344003136,0.164140899745061,0,3.15223013417866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0.906921534460845,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0.25347929989024,0,0.37456602987953,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0.526139422875686,0,0,0,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0.191288332068843,1.10295709559758,0 | |||
|short_description=p1@LOC100505050 | |||
}} |
Revision as of 01:01, 5 August 2015
Short description: | p1@LOC100505050 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOC100505050_5end |
Coexpression cluster: | MCL_coexpression_mm9:112 |
Association with transcript: | 17bp_to_ENSMUST00000098457_5end |
EntrezGene: | 100505050 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
insulating cell | 1.05e-14 | 2 |
myelin accumulating cell | 1.05e-14 | 2 |
Schwann cell | 1.05e-14 | 2 |
non-myelinating Schwann cell | 1.05e-14 | 2 |
myelinating Schwann cell;;Schwann cell | 1.05e-14 | 2 |
terminal Schwann cell | 1.05e-14 | 2 |
immature Schwann cell | 1.05e-14 | 2 |
Schwann cell precursor | 1.05e-14 | 2 |
autonomic neuron | 1.25e-12 | 9 |
ectodermal cell | 8.98e-12 | 44 |
neurectodermal cell | 8.98e-12 | 44 |
barrier cell | 4.07e-10 | 3 |
neural cell | 1.69e-09 | 43 |
neurecto-epithelial cell | 2.98e-08 | 1 |
ecto-epithelial cell | 2.98e-08 | 1 |
auditory epithelial support cell | 2.98e-08 | 1 |
supporting cell of cochlea | 2.98e-08 | 1 |
organ of Corti supporting cell | 2.98e-08 | 1 |
neuron | 3.55e-07 | 33 |
neuronal stem cell | 3.55e-07 | 33 |
neuroblast | 3.55e-07 | 33 |
electrically signaling cell | 3.55e-07 | 33 |
embryonic cell | 4.67e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 2.36e-22 | 11 |
parasympathetic nervous system | 1.78e-21 | 3 |
medulla oblongata | 3.13e-14 | 2 |
brainstem | 3.13e-14 | 2 |
myelencephalon | 3.13e-14 | 2 |
future myelencephalon | 3.13e-14 | 2 |
posterior neural tube | 5.12e-14 | 12 |
chordal neural plate | 5.12e-14 | 12 |
autonomic nervous system | 1.25e-12 | 9 |
spinal cord | 8.77e-11 | 6 |
dorsal region element | 8.77e-11 | 6 |
dorsum | 8.77e-11 | 6 |
nervous system | 6.10e-10 | 75 |
ectoderm-derived structure | 3.22e-09 | 95 |
ectoderm | 3.22e-09 | 95 |
presumptive ectoderm | 3.22e-09 | 95 |