FFCP PHASE1:Mm9::chr12:60232460..60232482,+: Difference between revisions
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{{FFCP|EntrezGene=217615|HGNC=|MCL_coexpression_id=36|UniProt=E9PY90|association_with_transcript=20bp_to_ENSMUST00000170992,NM_001165253,uc007nqh.1,uc007nqi.2_5end|description=CAGE_peak_1_at_Ctage5_5end|id=chr12:60232460..60232482,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!3.15e-18!130;UBERON:0000925!3.15e-18!130;UBERON:0006595!3.15e-18!130;UBERON:0002405!7.48e-18!70;UBERON:0001007!7.74e-18!128;UBERON:0001555!7.74e-18!128;UBERON:0007026!7.74e-18!128;UBERON:0004921!3.12e-17!126;UBERON:0004185!3.12e-17!126;UBERON:0000077!1.07e-16!97;UBERON:0001041!5.98e-16!92;UBERON:0005057!9.95e-16!51;UBERON:0003104!2.35e-14!131;UBERON:0009142!2.35e-14!131;UBERON:0000926!3.13e-12!193;UBERON:0004120!3.13e-12!193;UBERON:0006603!3.13e-12!193;UBERON:0005911!3.14e-12!69;UBERON:0003929!4.32e-12!55;UBERON:0002193!1.20e-11!48;UBERON:0002390!1.31e-10!45;UBERON:0003061!1.31e-10!45;UBERON:0000490!2.89e-10!66;UBERON:0004177!5.40e-10!29;UBERON:0002530!1.17e-09!65;UBERON:0000466!1.18e-08!79;UBERON:0000949!2.40e-08!72;UBERON:0002368!3.42e-08!60;UBERON:0002370!5.77e-08!23;UBERON:0000974!5.77e-08!23;UBERON:0004807!5.77e-08!23;UBERON:0005058!5.77e-08!23;UBERON:0003351!5.77e-08!23;UBERON:0009113!5.77e-08!23;UBERON:0003295!5.77e-08!23;UBERON:0009722!5.77e-08!23;UBERON:0005562!5.77e-08!23;UBERON:0007690!5.77e-08!23;UBERON:0003408!6.64e-08!24;UBERON:0000072!1.70e-07!27;UBERON:0001004!2.42e-07!42;UBERON:0000065!2.52e-07!41;UBERON:0006562!3.42e-07!24;UBERON:0001557!3.42e-07!24;UBERON:0001042!3.42e-07!24;UBERON:0008814!3.42e-07!24;UBERON:0009145!3.42e-07!24;UBERON:0002365!3.69e-07!25;UBERON:0002330!3.69e-07!25;UBERON:0001048!4.62e-07!147;UBERON:0009854!6.01e-07!23;UBERON:0009856!6.01e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.13e-17,118;UBERON:0000925,1.13e-17,118;UBERON:0006595,1.13e-17,118;UBERON:0001007,2.65e-17,116;UBERON:0001555,2.65e-17,116;UBERON:0007026,2.65e-17,116;UBERON:0004921,1.02e-16,114;UBERON:0001041,6.63e-16,80;UBERON:0005911,3.14e-12,69;UBERON:0003929,4.32e-12,55;UBERON:0002193,1.20e-11,48;UBERON:0002405,1.20e-11,48;UBERON:0002390,1.31e-10,45;UBERON:0003061,1.31e-10,45;UBERON:0000490,2.89e-10,66;UBERON:0000077,3.80e-10,35;UBERON:0004177,5.40e-10,29;UBERON:0005057,5.40e-10,29;UBERON:0002530,1.17e-09,65;UBERON:0000949,2.40e-08,72;UBERON:0002368,3.42e-08,60;UBERON:0002370,5.77e-08,23;UBERON:0000974,5.77e-08,23;UBERON:0004807,5.77e-08,23;UBERON:0005058,5.77e-08,23;UBERON:0003351,5.77e-08,23;UBERON:0009113,5.77e-08,23;UBERON:0003295,5.77e-08,23;UBERON:0009722,5.77e-08,23;UBERON:0005562,5.77e-08,23;UBERON:0007690,5.77e-08,23;UBERON:0003408,6.64e-08,24;UBERON:0000072,1.70e-07,27;UBERON:0001004,2.42e-07,42;UBERON:0000065,2.52e-07,41;UBERON:0006562,3.42e-07,24;UBERON:0001557,3.42e-07,24;UBERON:0001042,3.42e-07,24;UBERON:0008814,3.42e-07,24;UBERON:0009145,3.42e-07,24;UBERON:0002365,3.69e-07,25;UBERON:0002330,3.69e-07,25;UBERON:0009854,6.01e-07,23;UBERON:0009856,6.01e-07,23;UBERON:0002100,7.30e-07,90|phase1_expression=13.7728008510123,27.9180326111489,30.4849490390989,14.215817931421,18.0322462780685,20.4812711732506,23.127651418957,28.019761186822,69.8312061872267,44.0041309485348,57.8716732602207,29.6752431462651,37.8353613147965,27.2751655547272,54.296891175953,46.1643609648803,44.7719602002014,33.2812584452941,33.8672651006175,42.438965179803,14.9676190665883,21.2482635569895,17.2391860831697,34.3983709005824,26.1526580416574,21.2465826722557,24.1226717849082,20.4697671051595,16.3420140732482,12.3494763582366,10.4213340007993,13.9706748161119,17.8368788399525,0,18.4865036640816,23.6053196409059,16.5377178572519,91.6584271313828,81.2588758304752,89.5225602195195,131.763853318947,115.434686957977,108.754319078978,6.92432498865675,6.58950052926845,5.68994931701213,2.34717403304412,3.92445281484804,8.5677611266444,7.38833616482277,5.03951117851305,4.31257693094915,43.1201297568382,67.458679207055,48.3975070765148,20.5807548828758,24.0688089548556,22.17389996793,6.27181028664753,6.87688273053643,6.97214543856797,4.74382344896785,4.4464739805557,16.6481447697059,7.9109309005358,20.6039233334369,5.39280198933128,5.76327457982332,8.19147937236973,6.34527910158946,10.9368979902719,6.28432165688368,4.8591079009355,5.26710436624302,5.65488279007595,4.5960939330501,12.1127469099328,16.8547286272448,19.6616362567992,9.49581271657396,7.22752384459036,5.2091337055676,12.2840519560608,9.56696437053856,16.9606055032259,10.3120004915784,10.1083893367363,9.50637173709033,18.931548333296,16.1723138628521,21.7398366526258,22.371020801516,33.9985666853875,30.7630819233556,42.8852435515462,40.7704467258575,18.117330196996,11.0779709675738,6.75443611967459,15.546941278455,16.3378366940949,12.8326477414318,15.2883143823987,35.5533351576666,22.9480503471887,28.8830246641612,29.3204178108574,25.2346374179123,66.0291603300288,21.6725523034644,16.3076207160168,14.6143429589828,20.9860102503013,22.1562281612355,24.69362849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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:217615 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9PY90 | |||
|association_with_transcript=20bp_to_ENSMUST00000170992,NM_001165253,uc007nqh.1,uc007nqi.2_5end | |||
|cluster_id=chr12:60232460..60232482,+ | |||
|description=CAGE_peak_1_at_Ctage5_5end | |||
|id=chr12:60232460..60232482,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.15e-18!130;UBERON:0000925!3.15e-18!130;UBERON:0006595!3.15e-18!130;UBERON:0002405!7.48e-18!70;UBERON:0001007!7.74e-18!128;UBERON:0001555!7.74e-18!128;UBERON:0007026!7.74e-18!128;UBERON:0004921!3.12e-17!126;UBERON:0004185!3.12e-17!126;UBERON:0000077!1.07e-16!97;UBERON:0001041!5.98e-16!92;UBERON:0005057!9.95e-16!51;UBERON:0003104!2.35e-14!131;UBERON:0009142!2.35e-14!131;UBERON:0000926!3.13e-12!193;UBERON:0004120!3.13e-12!193;UBERON:0006603!3.13e-12!193;UBERON:0005911!3.14e-12!69;UBERON:0003929!4.32e-12!55;UBERON:0002193!1.20e-11!48;UBERON:0002390!1.31e-10!45;UBERON:0003061!1.31e-10!45;UBERON:0000490!2.89e-10!66;UBERON:0004177!5.40e-10!29;UBERON:0002530!1.17e-09!65;UBERON:0000466!1.18e-08!79;UBERON:0000949!2.40e-08!72;UBERON:0002368!3.42e-08!60;UBERON:0002370!5.77e-08!23;UBERON:0000974!5.77e-08!23;UBERON:0004807!5.77e-08!23;UBERON:0005058!5.77e-08!23;UBERON:0003351!5.77e-08!23;UBERON:0009113!5.77e-08!23;UBERON:0003295!5.77e-08!23;UBERON:0009722!5.77e-08!23;UBERON:0005562!5.77e-08!23;UBERON:0007690!5.77e-08!23;UBERON:0003408!6.64e-08!24;UBERON:0000072!1.70e-07!27;UBERON:0001004!2.42e-07!42;UBERON:0000065!2.52e-07!41;UBERON:0006562!3.42e-07!24;UBERON:0001557!3.42e-07!24;UBERON:0001042!3.42e-07!24;UBERON:0008814!3.42e-07!24;UBERON:0009145!3.42e-07!24;UBERON:0002365!3.69e-07!25;UBERON:0002330!3.69e-07!25;UBERON:0001048!4.62e-07!147;UBERON:0009854!6.01e-07!23;UBERON:0009856!6.01e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.13e-17,118;UBERON:0000925,1.13e-17,118;UBERON:0006595,1.13e-17,118;UBERON:0001007,2.65e-17,116;UBERON:0001555,2.65e-17,116;UBERON:0007026,2.65e-17,116;UBERON:0004921,1.02e-16,114;UBERON:0001041,6.63e-16,80;UBERON:0005911,3.14e-12,69;UBERON:0003929,4.32e-12,55;UBERON:0002193,1.20e-11,48;UBERON:0002405,1.20e-11,48;UBERON:0002390,1.31e-10,45;UBERON:0003061,1.31e-10,45;UBERON:0000490,2.89e-10,66;UBERON:0000077,3.80e-10,35;UBERON:0004177,5.40e-10,29;UBERON:0005057,5.40e-10,29;UBERON:0002530,1.17e-09,65;UBERON:0000949,2.40e-08,72;UBERON:0002368,3.42e-08,60;UBERON:0002370,5.77e-08,23;UBERON:0000974,5.77e-08,23;UBERON:0004807,5.77e-08,23;UBERON:0005058,5.77e-08,23;UBERON:0003351,5.77e-08,23;UBERON:0009113,5.77e-08,23;UBERON:0003295,5.77e-08,23;UBERON:0009722,5.77e-08,23;UBERON:0005562,5.77e-08,23;UBERON:0007690,5.77e-08,23;UBERON:0003408,6.64e-08,24;UBERON:0000072,1.70e-07,27;UBERON:0001004,2.42e-07,42;UBERON:0000065,2.52e-07,41;UBERON:0006562,3.42e-07,24;UBERON:0001557,3.42e-07,24;UBERON:0001042,3.42e-07,24;UBERON:0008814,3.42e-07,24;UBERON:0009145,3.42e-07,24;UBERON:0002365,3.69e-07,25;UBERON:0002330,3.69e-07,25;UBERON:0009854,6.01e-07,23;UBERON:0009856,6.01e-07,23;UBERON:0002100,7.30e-07,90 | |||
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| |||
|short_description=p1@Ctage5 | |||
}} |
Revision as of 03:40, 5 August 2015
Short description: | p1@Ctage5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ctage5_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 20bp_to_ENSMUST00000170992, NM_001165253, uc007nqh.1, uc007nqi.2_5end |
EntrezGene: | 217615 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data