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FFCP PHASE1:Mm9::chr15:31460593..31460604,-: Difference between revisions

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{{FFCP|EntrezGene=223455|HGNC=|MCL_coexpression_id=1|UniProt=Q6ZQ89|association_with_transcript=187bp_to_ENSMUST00000090227,NM_172606,uc007vkh.1_5end|description=CAGE_peak_4_at_March6_5end|id=chr15:31460593..31460604,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!1.22e-11!50;UBERON:0006238!1.22e-11!50;UBERON:0001049!1.66e-11!52;UBERON:0005068!1.66e-11!52;UBERON:0006241!1.66e-11!52;UBERON:0007135!1.66e-11!52;UBERON:0002346!1.86e-11!71;UBERON:0003075!1.86e-11!71;UBERON:0007284!1.86e-11!71;UBERON:0000033!2.85e-11!63;UBERON:0002616!4.14e-11!49;UBERON:0000025!8.22e-10!114;UBERON:0002020!3.00e-09!34;UBERON:0003080!3.57e-09!40;UBERON:0003056!5.92e-09!49;UBERON:0004111!6.05e-09!122;UBERON:0004121!6.61e-09!102;UBERON:0000924!6.61e-09!102;UBERON:0006601!6.61e-09!102;UBERON:0001017!7.17e-09!73;UBERON:0005743!7.17e-09!73;UBERON:0002780!1.19e-08!39;UBERON:0001890!1.19e-08!39;UBERON:0006240!1.19e-08!39;UBERON:0007811!1.85e-08!86;UBERON:0000073!2.54e-08!75;UBERON:0001016!2.54e-08!75;UBERON:0002791!6.53e-08!29;UBERON:0003528!6.53e-08!29;UBERON:0001893!6.53e-08!29;UBERON:0002021!1.42e-07!10;UBERON:0000411!1.42e-07!10;UBERON:0001950!1.42e-07!10;UBERON:0000153!1.98e-07!94;UBERON:0000477!3.31e-07!154|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.22e-16,54;UBERON:0001049,1.01e-14,52;UBERON:0005068,1.01e-14,52;UBERON:0006241,1.01e-14,52;UBERON:0007135,1.01e-14,52;UBERON:0000955,1.79e-13,47;UBERON:0006238,1.79e-13,47;UBERON:0010314,4.89e-13,92;UBERON:0002616,8.75e-13,46;UBERON:0002346,2.93e-12,64;UBERON:0003075,2.93e-12,64;UBERON:0007284,2.93e-12,64;UBERON:0003080,1.47e-11,40;UBERON:0001017,1.56e-11,73;UBERON:0000025,3.77e-11,114;UBERON:0002780,7.20e-11,39;UBERON:0001890,7.20e-11,39;UBERON:0006240,7.20e-11,39;UBERON:0002020,7.31e-11,34;UBERON:0001016,8.62e-11,75;UBERON:0003056,1.82e-10,49;UBERON:0010371,3.64e-10,73;UBERON:0003528,1.26e-09,29;UBERON:0002791,1.26e-09,29;UBERON:0001893,1.26e-09,29;UBERON:0004111,1.36e-09,122;UBERON:0002021,1.39e-09,10;UBERON:0000411,1.39e-09,10;UBERON:0001950,1.39e-09,10;UBERON:0004121,1.73e-09,95;UBERON:0000924,1.73e-09,95;UBERON:0006601,1.73e-09,95|phase1_expression=0.960893082628764,0,0,0.30246421130683,0,0,0.467225281191051,0.516493293766305,1.54867594366833,1.17032263160997,0.68487187290202,0.0797721589953364,0.513602189793617,0.174840804837995,0.666219523631325,0.607425802169478,0,0.630924330716475,0.685572168028694,0,1.9559956734746,0.992909512008853,0.522399578277871,0.159992422793407,0.68822784320151,0,0,0.215471232685889,0.570070258369122,0.504060259519861,0.886922042621219,0.635030673459631,0,0,0,0.831173226792462,0.204169356262369,0.418531630736908,0,1.57057123192139,0.588231488031014,0.683045484958446,0.485510353031154,0.503587271902309,0.405507724878058,0.550640256485045,0,0.436050312760893,0.219686182734472,0.388859798148567,0.699932108126813,0,1.17447824240415,2.17608642603403,0,0.257259436035947,0,0,2.63011399117477,1.05798195854407,0,0,0,0.449949858640699,0,0.7104801149461,0.898800331555214,1.15265491596466,0.518448061542388,0.810035629990144,0.210324961351382,1.42825492201902,0.883474163806454,0.979926393719632,0.862609239164127,0,5.50579404996943,2.68143409978894,1.84327839907492,1.71452174049252,2.19570344645783,3.12548022334056,1.11673199600552,4.50210088025344,3.0559649555362,1.17851434189467,3.13217697758026,2.79599168737951,0.681535739998656,0.226714680320357,1.73918693221007,1.72084775396277,2.03991400112325,0.539703191637817,0,1.79210754838934,0.561777680527007,0.340860645156116,0,0,0.704217098883403,0,0,0,0.216491041011214,0.760079596425296,0.505524445014783,0.91347103775248,1.29468941823586,0.890652834388949,0.693941307064543,1.82679286987285,0.922461989024234,0.904335843315735,2.82212897125692,1.25666591329675,1.23597483867187,1.3013942122792,0.884610551949874,0.647067399789637,0.441683036920787,0.969750506270444,0,1.75668478206928,5.65506108396329,0.510914110417183,0.479260498023681,0,1.01656181658452,3.2953940669061,4.57500602818627,2.26177833803156,5.38855392596057,4.60287823194595,1.66230435647648,3.89379031362618,0.407357455401265,0.995255764880744,1.0108910337347,0.631325567659422,2.08192708740326,0.689706313300419,0.720248519221397,1.20563854268572,1.29269348387523,0.384341160854549,0.749613796477831,1.55222022443409,1.5089759505299,1.32374256117473,0.175951124163949,0,0.834141747676794,0,0.205782136407943,0.796137067273973,0,0.772043721344145,1.13665399758237,0.828503090142008,0.938104239924385,1.2604344302271,1.65721314909647,0.196764231747404,2.1597395804233,1.39520366850245,1.3413670069981,1.75148013550754,0.493679549740441,0.985004784474571,2.51313309592153,3.07019973593198,2.85415149878366,2.28150911892632,4.41608891984667,2.6755199218614,0,1.05780226665418,1.06644125267617,1.16118335930219,0.38660238396628,0.201683524623343,0.667134131534611,0.570676878337677,1.42358718463353,0.494096864172033,2.01068167040216,0.795825888164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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:223455
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=uniprot:Q6ZQ89
|association_with_transcript=187bp_to_ENSMUST00000090227,NM_172606,uc007vkh.1_5end
|cluster_id=chr15:31460593..31460604,-
|description=CAGE_peak_4_at_March6_5end
|id=chr15:31460593..31460604,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!1.22e-11!50;UBERON:0006238!1.22e-11!50;UBERON:0001049!1.66e-11!52;UBERON:0005068!1.66e-11!52;UBERON:0006241!1.66e-11!52;UBERON:0007135!1.66e-11!52;UBERON:0002346!1.86e-11!71;UBERON:0003075!1.86e-11!71;UBERON:0007284!1.86e-11!71;UBERON:0000033!2.85e-11!63;UBERON:0002616!4.14e-11!49;UBERON:0000025!8.22e-10!114;UBERON:0002020!3.00e-09!34;UBERON:0003080!3.57e-09!40;UBERON:0003056!5.92e-09!49;UBERON:0004111!6.05e-09!122;UBERON:0004121!6.61e-09!102;UBERON:0000924!6.61e-09!102;UBERON:0006601!6.61e-09!102;UBERON:0001017!7.17e-09!73;UBERON:0005743!7.17e-09!73;UBERON:0002780!1.19e-08!39;UBERON:0001890!1.19e-08!39;UBERON:0006240!1.19e-08!39;UBERON:0007811!1.85e-08!86;UBERON:0000073!2.54e-08!75;UBERON:0001016!2.54e-08!75;UBERON:0002791!6.53e-08!29;UBERON:0003528!6.53e-08!29;UBERON:0001893!6.53e-08!29;UBERON:0002021!1.42e-07!10;UBERON:0000411!1.42e-07!10;UBERON:0001950!1.42e-07!10;UBERON:0000153!1.98e-07!94;UBERON:0000477!3.31e-07!154
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.22e-16,54;UBERON:0001049,1.01e-14,52;UBERON:0005068,1.01e-14,52;UBERON:0006241,1.01e-14,52;UBERON:0007135,1.01e-14,52;UBERON:0000955,1.79e-13,47;UBERON:0006238,1.79e-13,47;UBERON:0010314,4.89e-13,92;UBERON:0002616,8.75e-13,46;UBERON:0002346,2.93e-12,64;UBERON:0003075,2.93e-12,64;UBERON:0007284,2.93e-12,64;UBERON:0003080,1.47e-11,40;UBERON:0001017,1.56e-11,73;UBERON:0000025,3.77e-11,114;UBERON:0002780,7.20e-11,39;UBERON:0001890,7.20e-11,39;UBERON:0006240,7.20e-11,39;UBERON:0002020,7.31e-11,34;UBERON:0001016,8.62e-11,75;UBERON:0003056,1.82e-10,49;UBERON:0010371,3.64e-10,73;UBERON:0003528,1.26e-09,29;UBERON:0002791,1.26e-09,29;UBERON:0001893,1.26e-09,29;UBERON:0004111,1.36e-09,122;UBERON:0002021,1.39e-09,10;UBERON:0000411,1.39e-09,10;UBERON:0001950,1.39e-09,10;UBERON:0004121,1.73e-09,95;UBERON:0000924,1.73e-09,95;UBERON:0006601,1.73e-09,95
|phase1_expression=0.960893082628764,0,0,0.30246421130683,0,0,0.467225281191051,0.516493293766305,1.54867594366833,1.17032263160997,0.68487187290202,0.0797721589953364,0.513602189793617,0.174840804837995,0.666219523631325,0.607425802169478,0,0.630924330716475,0.685572168028694,0,1.9559956734746,0.992909512008853,0.522399578277871,0.159992422793407,0.68822784320151,0,0,0.215471232685889,0.570070258369122,0.504060259519861,0.886922042621219,0.635030673459631,0,0,0,0.831173226792462,0.204169356262369,0.418531630736908,0,1.57057123192139,0.588231488031014,0.683045484958446,0.485510353031154,0.503587271902309,0.405507724878058,0.550640256485045,0,0.436050312760893,0.219686182734472,0.388859798148567,0.699932108126813,0,1.17447824240415,2.17608642603403,0,0.257259436035947,0,0,2.63011399117477,1.05798195854407,0,0,0,0.449949858640699,0,0.7104801149461,0.898800331555214,1.15265491596466,0.518448061542388,0.810035629990144,0.210324961351382,1.42825492201902,0.883474163806454,0.979926393719632,0.862609239164127,0,5.50579404996943,2.68143409978894,1.84327839907492,1.71452174049252,2.19570344645783,3.12548022334056,1.11673199600552,4.50210088025344,3.0559649555362,1.17851434189467,3.13217697758026,2.79599168737951,0.681535739998656,0.226714680320357,1.73918693221007,1.72084775396277,2.03991400112325,0.539703191637817,0,1.79210754838934,0.561777680527007,0.340860645156116,0,0,0.704217098883403,0,0,0,0.216491041011214,0.760079596425296,0.505524445014783,0.91347103775248,1.29468941823586,0.890652834388949,0.693941307064543,1.82679286987285,0.922461989024234,0.904335843315735,2.82212897125692,1.25666591329675,1.23597483867187,1.3013942122792,0.884610551949874,0.647067399789637,0.441683036920787,0.969750506270444,0,1.75668478206928,5.65506108396329,0.510914110417183,0.479260498023681,0,1.01656181658452,3.2953940669061,4.57500602818627,2.26177833803156,5.38855392596057,4.60287823194595,1.66230435647648,3.89379031362618,0.407357455401265,0.995255764880744,1.0108910337347,0.631325567659422,2.08192708740326,0.689706313300419,0.720248519221397,1.20563854268572,1.29269348387523,0.384341160854549,0.749613796477831,1.55222022443409,1.5089759505299,1.32374256117473,0.175951124163949,0,0.834141747676794,0,0.205782136407943,0.796137067273973,0,0.772043721344145,1.13665399758237,0.828503090142008,0.938104239924385,1.2604344302271,1.65721314909647,0.196764231747404,2.1597395804233,1.39520366850245,1.3413670069981,1.75148013550754,0.493679549740441,0.985004784474571,2.51313309592153,3.07019973593198,2.85415149878366,2.28150911892632,4.41608891984667,2.6755199218614,0,1.05780226665418,1.06644125267617,1.16118335930219,0.38660238396628,0.201683524623343,0.667134131534611,0.570676878337677,1.42358718463353,0.494096864172033,2.01068167040216,0.795825888164603,0.19496408711912,0.898819408654221,0.432276099749388,1.1948476395262,1.51734320762465,0.228497025219458,1.1270773567308,0.814605311381257,1.35766741017338,1.68325967736765,1.51767689098217,1.62371162777562,0.784993639206874,0.863780147452604,0.889357881261447,0.166845105716094,0.786235980452812,0.224862112384854,0.608580364165509,0.241177159752417,0,1.15078454980324,3.24270453550071,0.274561413188081,1.43768206527355,1.11642284300551,0.624075346229121,0.252578877947112,0.538192240565737,2.8946611281802,1.47802552133284,0.757965647081939,0.651859905768103,0.678980343100753,0.704070744865506,0.837531287209079,0.238043640886014,0.585400943573396,1.26108115284953,1.10732344824387,0.797273843287435,1.47476983244164,0.690739927463582,1.44649058581512,0,0,0,0.827810238914197,2.24770825982909,1.99259867206745,0.491804836130026,3.28212205365685,0,0.780877488593277,0.861693590931196,0,0.668396022247182,0,0.404810701674894,0.292255857911312,0.395287777946524,3.21321316421807,1.13552068166615,0.890328018336276,1.46598263418218,0.659880491890142,0,0,0.302323556964751,1.13163047853539,0.885905678642318,1.22974059177571,0.516856586336442,0.727067458955011,0.356497378384721,0,0,0,0.680879211507576,0.36012218806262,1.16422815404479,2.35770738534752,0.177340233642274,1.24858172321449,2.30368628842969,1.2178597964584,0.23467170806371,1.0591603543191,0.661585194164886,0.16488625294148,1.29171541356724,0.241251699712623,1.43246812803764,0.820704498725306,1.1659233465194,2.22510362412612,1.02522528478712,0.412773735926445,0.555583582109135,0.753473828018764,0.27338845544205,1.14389086603261,1.86976272993241,2.93898049879682,1.52019971184866,0,0.632671987162271,0.406638934253697,1.08005340821801,0,0.436725127492355,1.07891477107857,0.495920734352016,0.26175594198403,0.518459893167171,0.621339313086926,0.56369293868419,1.64468200648377,1.15820943319968,0.972255941720238,0.645799117388655,0.844780627453891,0.58678619322877,0.651021924219751,0.838874755405687,1.20792060413003,1.15212002503146,0.632022241256357,0.608175645870493,0.513554785824136,0.649604114888975,1.43221356533985,1.19208812868759,0.841368146639782,1.03382669022204,0.807731599585181,1.21930890648,0.806609481094724,0.877120926657772,0.865906574762965,1.40252282617883,1.36038230169127,0,0.269141569828427,0.167884616364078,0.772758376128762,0.187682475451182,0.183151624267265,0.214368379079066,0,9.60078132449013,4.60325236507177,6.30185064783336,3.26521046453006,2.05524755931193,3.0215755895588,2.70009000092722,5.40385443869065,4.53142408984205,5.1776031175182,0.415149390336707,1.19707462020309,0.512200817262403,1.21553358534147,0.838452650511929,0.367687016900028,0.888986911206461,0.412070114477788,0.962757628775446,0.758091635291392,1.52087579934144,0.754505365544305,0.468207537349412,1.02440243847791,0.804096565378586,0.952587382566147,0.347652977834566,0.38581844092741,0,0.883193520806384,1.71434626192708,1.4198064492747,1.1921809497366,0.726732083161643,0.470546902076653,1.01537529470012,0.548783918618318,1.05227884575137,1.08643291076689,0,0.474540072496697,0.394017929502254,0.818462086339379,0.619747364743864,0.578719832943424,1.74867404556562,1.16965804222704,1.93383948643468,0.956441660344217,0.661774257358546,0
|short_description=p4@March6
}}

Revision as of 04:12, 5 August 2015

Short description:p4@March6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_March6_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 187bp_to_ENSMUST00000090227, NM_172606, uc007vkh.1_5end
EntrezGene:223455
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@March6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.68
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C12.82
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I25.66
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A43.30
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F12.26
cortex, adult.CNhs10473.12-14D55.39
cortex, neonate N30.CNhs11107.1392-42F24.60
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B23.89
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C62.08
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.29
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C62.16
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E31.75
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G12.51
heart, neonate N20.CNhs11127.821-26I63.07
heart, neonate N25.CNhs11196.1351-25D32.85
heart, neonate N30.CNhs11202.1390-42D22.28
hippocampus, adult.CNhs10478.13-16E84.42
hippocampus, neonate N00.CNhs11228.627-43G12.68
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G71.68
kidney, neonate N10.CNhs11206.758-6D51.52
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F43.24
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A31.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I51.43
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.52
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D31.22
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G21.40
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.22e-1654
neural tube1.01e-1452
neural rod1.01e-1452
future spinal cord1.01e-1452
neural keel1.01e-1452
brain1.79e-1347
future brain1.79e-1347
structure with developmental contribution from neural crest4.89e-1392
regional part of brain8.75e-1346
neurectoderm2.93e-1264
neural plate2.93e-1264
presumptive neural plate2.93e-1264
anterior neural tube1.47e-1140
central nervous system1.56e-1173
tube3.77e-11114
regional part of forebrain7.20e-1139
forebrain7.20e-1139
future forebrain7.20e-1139
gray matter7.31e-1134
nervous system8.62e-1175
pre-chordal neural plate1.82e-1049
ecto-epithelium3.64e-1073
brain grey matter1.26e-0929
regional part of telencephalon1.26e-0929
telencephalon1.26e-0929
anatomical conduit1.36e-09122
occipital lobe1.39e-0910
visual cortex1.39e-0910
neocortex1.39e-0910
ectoderm-derived structure1.73e-0995
ectoderm1.73e-0995
presumptive ectoderm1.73e-0995
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