FFCP PHASE1:Mm9::chr6:125271427..125271438,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=20276|HGNC=|MCL_coexpression_id=11|UniProt=Q3USG4,Q61180|association_with_transcript=69bp_to_ENSMUST00000081440,ENSMUST00000163886,NM_011324,uc009duk.2_5end|description=CAGE_peak_5_at_Scnn1a_5end|id=chr6:125271427..125271438,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001008!1.04e-09!17;UBERON:0002113!2.71e-09!14;UBERON:0003918!2.71e-09!14;UBERON:0005095!2.71e-09!14;UBERON:0007687!2.71e-09!14;UBERON:0006554!6.65e-09!16|ontology_enrichment_uberon_v019_2=UBERON:0000014,1.11e-14,5;UBERON:0001003,1.11e-14,5;UBERON:0002097,1.11e-14,5;UBERON:0002199,1.11e-14,5;UBERON:0007029,1.11e-14,5;UBERON:0007376,1.11e-14,5;UBERON:0002416,1.11e-14,5;UBERON:0007383,1.11e-14,5;UBERON:0002113,2.41e-13,14;UBERON:0003918,2.41e-13,14;UBERON:0011143,2.41e-13,14;UBERON:0005095,2.41e-13,14;UBERON:0007687,2.41e-13,14;UBERON:0001008,8.90e-12,19;UBERON:0003102,9.05e-12,22;UBERON:0006554,4.33e-10,18;UBERON:0000489,1.83e-08,21;UBERON:0000165,2.21e-07,2;UBERON:0000166,2.21e-07,2;UBERON:0000930,2.21e-07,2|phase1_expression=0,0,0,0.30246421130683,0,0.16787927191189,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.59857431606684,0,0,0,0,0,0,0.117588707135705,0,0.741584903203122,0,0,0,0,0,3.72783522436244,0,0,0,0,0,0,0,0,0,0.347648640384553,0,0,0,0.203678727700633,0.248813941220186,1.26361379216837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39300866608867,1.4404749548556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0.329397909448022,0,0.198956472041151,0.38992817423824,0,0.432276099749388,1.39398891278057,0,0.114248512609729,1.1270773567308,0.407302655690628,1.35766741017338,2.87556861550306,4.80597682144355,8.11855813887812,8.32093257559286,5.30607804863742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0.502518772325447,0.238043640886014,1.75620283072019,0.157635144106191,0.44292937929755,1.2756381492599,0.655453258862952,1.20879487306127,0.867894351489069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0.469343416127421,0.21183207086382,0.220528398054962,2.14352128823924,1.13025098687134,1.26657142349127,1.19372344003136,2.46211349617592,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0.836353184057875,1.52853794622324,1.07891477107857,1.90102948168273,1.83229159388821,0.777689839750757,3.72803587852155,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0.228620419965,0,0.0974578807397524,0.0962118416403295,0,1.58711268530648,0,0,0,0,0,0,1.07184189539533,0,0,0,0,0,0,0,0,0.45032120322422,0,0.51776031175182,0,0,0,0,0.209613162627982,0,0.222246727801615,0,0.64183841918363,0.252697211763798,0,0.377252682772152,0.280924522409647,0.256100609619477,0.34461281373368,0,0.115884325944855,0.192909220463705,0,0.441596760403192,0,0.354951612318675,0,0,0.188218760830661,0.0846146078916765,0.365855945745545,0.789209134313529,0.135804113845862,0.561142271657738,0,0.0985044823755635,0.409231043169689,0,0.192906610981141,1.24905288968973,0.233931608445408,0,0.191288332068843,0.220591419119515,0|short_description=p5@Scnn1a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20276 | |||
|HGNC= | |||
|MCL_coexpression_id=11 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3USG4,uniprot:Q61180 | |||
|association_with_transcript=69bp_to_ENSMUST00000081440,ENSMUST00000163886,NM_011324,uc009duk.2_5end | |||
|cluster_id=chr6:125271427..125271438,+ | |||
|description=CAGE_peak_5_at_Scnn1a_5end | |||
|id=chr6:125271427..125271438,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001008!1.04e-09!17;UBERON:0002113!2.71e-09!14;UBERON:0003918!2.71e-09!14;UBERON:0005095!2.71e-09!14;UBERON:0007687!2.71e-09!14;UBERON:0006554!6.65e-09!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,1.11e-14,5;UBERON:0001003,1.11e-14,5;UBERON:0002097,1.11e-14,5;UBERON:0002199,1.11e-14,5;UBERON:0007029,1.11e-14,5;UBERON:0007376,1.11e-14,5;UBERON:0002416,1.11e-14,5;UBERON:0007383,1.11e-14,5;UBERON:0002113,2.41e-13,14;UBERON:0003918,2.41e-13,14;UBERON:0011143,2.41e-13,14;UBERON:0005095,2.41e-13,14;UBERON:0007687,2.41e-13,14;UBERON:0001008,8.90e-12,19;UBERON:0003102,9.05e-12,22;UBERON:0006554,4.33e-10,18;UBERON:0000489,1.83e-08,21;UBERON:0000165,2.21e-07,2;UBERON:0000166,2.21e-07,2;UBERON:0000930,2.21e-07,2 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0.16787927191189,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.59857431606684,0,0,0,0,0,0,0.117588707135705,0,0.741584903203122,0,0,0,0,0,3.72783522436244,0,0,0,0,0,0,0,0,0,0.347648640384553,0,0,0,0.203678727700633,0.248813941220186,1.26361379216837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39300866608867,1.4404749548556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0.329397909448022,0,0.198956472041151,0.38992817423824,0,0.432276099749388,1.39398891278057,0,0.114248512609729,1.1270773567308,0.407302655690628,1.35766741017338,2.87556861550306,4.80597682144355,8.11855813887812,8.32093257559286,5.30607804863742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0.502518772325447,0.238043640886014,1.75620283072019,0.157635144106191,0.44292937929755,1.2756381492599,0.655453258862952,1.20879487306127,0.867894351489069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0.469343416127421,0.21183207086382,0.220528398054962,2.14352128823924,1.13025098687134,1.26657142349127,1.19372344003136,2.46211349617592,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0.836353184057875,1.52853794622324,1.07891477107857,1.90102948168273,1.83229159388821,0.777689839750757,3.72803587852155,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0.228620419965,0,0.0974578807397524,0.0962118416403295,0,1.58711268530648,0,0,0,0,0,0,1.07184189539533,0,0,0,0,0,0,0,0,0.45032120322422,0,0.51776031175182,0,0,0,0,0.209613162627982,0,0.222246727801615,0,0.64183841918363,0.252697211763798,0,0.377252682772152,0.280924522409647,0.256100609619477,0.34461281373368,0,0.115884325944855,0.192909220463705,0,0.441596760403192,0,0.354951612318675,0,0,0.188218760830661,0.0846146078916765,0.365855945745545,0.789209134313529,0.135804113845862,0.561142271657738,0,0.0985044823755635,0.409231043169689,0,0.192906610981141,1.24905288968973,0.233931608445408,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p5@Scnn1a | |||
}} |
Revision as of 04:22, 5 August 2015
Short description: | p5@Scnn1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Scnn1a_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | 69bp_to_ENSMUST00000081440, ENSMUST00000163886, NM_011324, uc009duk.2_5end |
EntrezGene: | 20276 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
zone of skin | 1.11e-14 | 5 |
skin epidermis | 1.11e-14 | 5 |
skin of body | 1.11e-14 | 5 |
integument | 1.11e-14 | 5 |
surface | 1.11e-14 | 5 |
outer epithelium | 1.11e-14 | 5 |
integumental system | 1.11e-14 | 5 |
enveloping layer of ectoderm | 1.11e-14 | 5 |
kidney | 2.41e-13 | 14 |
kidney mesenchyme | 2.41e-13 | 14 |
upper urinary tract | 2.41e-13 | 14 |
kidney rudiment | 2.41e-13 | 14 |
kidney field | 2.41e-13 | 14 |
renal system | 8.90e-12 | 19 |
surface structure | 9.05e-12 | 22 |
urinary system structure | 4.33e-10 | 18 |
cavitated compound organ | 1.83e-08 | 21 |
mouth | 2.21e-07 | 2 |
oral opening | 2.21e-07 | 2 |
stomodeum | 2.21e-07 | 2 |