FFCP PHASE1:Mm9::chr9:46050406..46050418,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=191|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:46050406..46050418,-|id=chr9:46050406..46050418,-|ontology_enrichment_celltype=CL:0000239!3.24e-13!6;CL:0000677!3.24e-13!6;CL:0000212!3.24e-13!6;CL:0000584!3.24e-13!6;CL:0000075!3.30e-11!7;CL:0002563!1.57e-08!9;CL:0002251!1.57e-08!9;CL:0000473!5.76e-08!3;CL:0000627!5.76e-08!3;CL:0000682!5.76e-08!3;CL:0000066!2.81e-07!25|ontology_enrichment_celltype_v019_2=CL:0000239,1.43e-19,6;CL:0000677,1.43e-19,6;CL:0000584,1.43e-19,6;CL:0000075,1.06e-16,7;CL:0002563,7.19e-13,9;CL:0002251,7.19e-13,9;CL:0000066,6.09e-12,25;CL:0000682,1.84e-11,3;CL:0002076,1.72e-07,15;CL:0000223,2.47e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!9.55e-20!43;UBERON:0000344!4.10e-16!15;UBERON:0005409!3.10e-14!59;UBERON:0001242!2.67e-12!13;UBERON:0000060!2.67e-12!13;UBERON:0001262!2.67e-12!13;UBERON:0004786!2.67e-12!13;UBERON:0004923!6.12e-11!24;UBERON:0003350!1.57e-08!9;UBERON:0004808!1.57e-08!9;UBERON:0001277!1.57e-08!9;UBERON:0001007!7.26e-07!128;UBERON:0001555!7.26e-07!128;UBERON:0007026!7.26e-07!128;UBERON:0000485!7.90e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.83e-31,31;UBERON:0000344,6.21e-21,15;UBERON:0005409,1.50e-19,47;UBERON:0001242,2.67e-15,13;UBERON:0001262,2.67e-15,13;UBERON:0004786,2.67e-15,13;UBERON:0004923,5.23e-15,24;UBERON:0003350,7.19e-13,9;UBERON:0004808,7.19e-13,9;UBERON:0001277,7.19e-13,9;UBERON:0000485,1.99e-10,11;UBERON:0001007,7.01e-10,116;UBERON:0001555,7.01e-10,116;UBERON:0007026,7.01e-10,116;UBERON:0004119,1.22e-09,118;UBERON:0000925,1.22e-09,118;UBERON:0006595,1.22e-09,118;UBERON:0001962,3.04e-08,2;UBERON:0001961,3.04e-08,2;UBERON:0001744,3.04e-08,2;UBERON:0004921,8.31e-08,114|phase1_expression=0,15.3549179361319,16.3799726180233,2.11724947914781,2.50447864973174,1.84667199103079,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.07971206614945,15.8292403936347,16.0784949952206,7.75371593086335,5.17130958446134,0.190023419456374,0,2.66076612786366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0798280022465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,2.22475470960936,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95628174475697,2.90895623329899,0,0,0,0,0.667134131534611,2.85338439168839,5.21981967698963,11.6936257854048,11.3100843960121,4.97391180102877,4.09424582950152,0,1.08069024937347,1.39398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09824565275233,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.66369338607761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.50695859978048,0,0.0936415074698824,0,0.114870937911227,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0.169229215783353,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0|short_description=p@chr9:46050406..46050418,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=191 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:46050406..46050418,- | |||
|description=CAGE_peak_at_chr9:46050406..46050418,- | |||
|id=chr9:46050406..46050418,- | |||
|ontology_enrichment_celltype=CL:0000239!3.24e-13!6;CL:0000677!3.24e-13!6;CL:0000212!3.24e-13!6;CL:0000584!3.24e-13!6;CL:0000075!3.30e-11!7;CL:0002563!1.57e-08!9;CL:0002251!1.57e-08!9;CL:0000473!5.76e-08!3;CL:0000627!5.76e-08!3;CL:0000682!5.76e-08!3;CL:0000066!2.81e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.43e-19,6;CL:0000677,1.43e-19,6;CL:0000584,1.43e-19,6;CL:0000075,1.06e-16,7;CL:0002563,7.19e-13,9;CL:0002251,7.19e-13,9;CL:0000066,6.09e-12,25;CL:0000682,1.84e-11,3;CL:0002076,1.72e-07,15;CL:0000223,2.47e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!9.55e-20!43;UBERON:0000344!4.10e-16!15;UBERON:0005409!3.10e-14!59;UBERON:0001242!2.67e-12!13;UBERON:0000060!2.67e-12!13;UBERON:0001262!2.67e-12!13;UBERON:0004786!2.67e-12!13;UBERON:0004923!6.12e-11!24;UBERON:0003350!1.57e-08!9;UBERON:0004808!1.57e-08!9;UBERON:0001277!1.57e-08!9;UBERON:0001007!7.26e-07!128;UBERON:0001555!7.26e-07!128;UBERON:0007026!7.26e-07!128;UBERON:0000485!7.90e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.83e-31,31;UBERON:0000344,6.21e-21,15;UBERON:0005409,1.50e-19,47;UBERON:0001242,2.67e-15,13;UBERON:0001262,2.67e-15,13;UBERON:0004786,2.67e-15,13;UBERON:0004923,5.23e-15,24;UBERON:0003350,7.19e-13,9;UBERON:0004808,7.19e-13,9;UBERON:0001277,7.19e-13,9;UBERON:0000485,1.99e-10,11;UBERON:0001007,7.01e-10,116;UBERON:0001555,7.01e-10,116;UBERON:0007026,7.01e-10,116;UBERON:0004119,1.22e-09,118;UBERON:0000925,1.22e-09,118;UBERON:0006595,1.22e-09,118;UBERON:0001962,3.04e-08,2;UBERON:0001961,3.04e-08,2;UBERON:0001744,3.04e-08,2;UBERON:0004921,8.31e-08,114 | |||
|phase1_expression=0,15.3549179361319,16.3799726180233,2.11724947914781,2.50447864973174,1.84667199103079,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.07971206614945,15.8292403936347,16.0784949952206,7.75371593086335,5.17130958446134,0.190023419456374,0,2.66076612786366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0798280022465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,2.22475470960936,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95628174475697,2.90895623329899,0,0,0,0,0.667134131534611,2.85338439168839,5.21981967698963,11.6936257854048,11.3100843960121,4.97391180102877,4.09424582950152,0,1.08069024937347,1.39398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09824565275233,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55056975900933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.66369338607761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.50695859978048,0,0.0936415074698824,0,0.114870937911227,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0.169229215783353,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr9:46050406..46050418,- | |||
}} |
Latest revision as of 05:35, 5 August 2015
Short description: | p@chr9:46050406..46050418, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:46050406..46050418, - |
Coexpression cluster: | MCL_coexpression_mm9:191 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.43e-19 | 6 |
gut absorptive cell | 1.43e-19 | 6 |
enterocyte | 1.43e-19 | 6 |
columnar/cuboidal epithelial cell | 1.06e-16 | 7 |
intestinal epithelial cell | 7.19e-13 | 9 |
epithelial cell of alimentary canal | 7.19e-13 | 9 |
epithelial cell | 6.09e-12 | 25 |
M cell of gut | 1.84e-11 | 3 |
endo-epithelial cell | 1.72e-07 | 15 |
endodermal cell | 2.47e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.83e-31 | 31 |
mucosa | 6.21e-21 | 15 |
gastrointestinal system | 1.50e-19 | 47 |
intestinal mucosa | 2.67e-15 | 13 |
wall of intestine | 2.67e-15 | 13 |
gastrointestinal system mucosa | 2.67e-15 | 13 |
organ component layer | 5.23e-15 | 24 |
epithelium of mucosa | 7.19e-13 | 9 |
gastrointestinal system epithelium | 7.19e-13 | 9 |
intestinal epithelium | 7.19e-13 | 9 |
simple columnar epithelium | 1.99e-10 | 11 |
digestive system | 7.01e-10 | 116 |
digestive tract | 7.01e-10 | 116 |
primitive gut | 7.01e-10 | 116 |
endoderm-derived structure | 1.22e-09 | 118 |
endoderm | 1.22e-09 | 118 |
presumptive endoderm | 1.22e-09 | 118 |
gut-associated lymphoid tissue | 3.04e-08 | 2 |
mucosa-associated lymphoid tissue | 3.04e-08 | 2 |
lymphoid tissue | 3.04e-08 | 2 |
subdivision of digestive tract | 8.31e-08 | 114 |