FFCP PHASE1:Mm9::chr9:46050688..46050713,+: Difference between revisions
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|id=chr9:46050688..46050713,+
|short_description=p@chr9:46050688..46050713,+
|description=CAGE_peak_at_chr9:46050688..46050713,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=191 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:46050688..46050713,+ | |||
|description=CAGE_peak_at_chr9:46050688..46050713,+ | |||
|id=chr9:46050688..46050713,+ | |||
|ontology_enrichment_celltype=CL:0000239!6.71e-10!6;CL:0000677!6.71e-10!6;CL:0000212!6.71e-10!6;CL:0000584!6.71e-10!6;CL:0000075!2.51e-08!7;CL:0000066!7.62e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.44e-16,6;CL:0000677,4.44e-16,6;CL:0000584,4.44e-16,6;CL:0000075,1.09e-13,7;CL:0002563,1.70e-10,9;CL:0002251,1.70e-10,9;CL:0000066,2.57e-09,25;CL:0000682,2.87e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.77e-17!43;UBERON:0005409!6.74e-15!59;UBERON:0000344!1.57e-13!15;UBERON:0001242!1.33e-10!13;UBERON:0000060!1.33e-10!13;UBERON:0001262!1.33e-10!13;UBERON:0004786!1.33e-10!13;UBERON:0004923!1.23e-08!24;UBERON:0001007!1.76e-08!128;UBERON:0001555!1.76e-08!128;UBERON:0007026!1.76e-08!128;UBERON:0004119!3.40e-08!130;UBERON:0000925!3.40e-08!130;UBERON:0006595!3.40e-08!130;UBERON:0004921!3.46e-07!126;UBERON:0004185!3.46e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.60e-41,31;UBERON:0005409,1.60e-25,47;UBERON:0000344,3.61e-20,15;UBERON:0001242,3.15e-15,13;UBERON:0001262,3.15e-15,13;UBERON:0004786,3.15e-15,13;UBERON:0004923,5.20e-14,24;UBERON:0001007,1.18e-12,116;UBERON:0001555,1.18e-12,116;UBERON:0007026,1.18e-12,116;UBERON:0004119,2.43e-12,118;UBERON:0000925,2.43e-12,118;UBERON:0006595,2.43e-12,118;UBERON:0003350,1.70e-10,9;UBERON:0004808,1.70e-10,9;UBERON:0001277,1.70e-10,9;UBERON:0004921,1.85e-10,114;UBERON:0000485,1.84e-08,11;UBERON:0001962,3.49e-07,2;UBERON:0001961,3.49e-07,2;UBERON:0001744,3.49e-07,2 | |||
|phase1_expression=0,28.6159834264276,38.219936108721,7.86406949397758,10.0179145989269,2.85394762250213,7.00837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.758211779244,52.3053160833148,25.2662064210609,10.7690499039769,16.8067561494993,1.52018735565099,0.252030129759931,5.54326276638262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9194553404473,0.539703191637817,0,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0,0,0,0,5.43828929015623,0,0,0,0,0,0,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2254949704005,8.72686869989696,0,0,0,1.81515172161008,2.00140239460383,5.32631753115166,14.2358718463353,20.7520682952254,25.8875265064278,16.3144307073744,16.182019230887,15.2799299471218,8.21324589523838,5.97423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648540907100142,1.64736847912849,4.31304619582064,0,0.312037673114561,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87642439752332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.9014286036478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.87345025498471,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0.37456602987953,0.192075457214608,0.17230640686684,0,0.347652977834566,0.192909220463705,0,0.294397840268795,0.342869252385415,0.532427418478012,0,0,0.188218760830661,0.338458431566706,0.182927972872773,0,0.135804113845862,0.561142271657738,0,0,0.409231043169689,0.154936841185966,0.192906610981141,0,0.467863216890817,0.214871054048298,0,0,0 | |phase1_expression=0,28.6159834264276,38.219936108721,7.86406949397758,10.0179145989269,2.85394762250213,7.00837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.758211779244,52.3053160833148,25.2662064210609,10.7690499039769,16.8067561494993,1.52018735565099,0.252030129759931,5.54326276638262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9194553404473,0.539703191637817,0,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0,0,0,0,0,0,5.43828929015623,0,0,0,0,0,0,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2254949704005,8.72686869989696,0,0,0,1.81515172161008,2.00140239460383,5.32631753115166,14.2358718463353,20.7520682952254,25.8875265064278,16.3144307073744,16.182019230887,15.2799299471218,8.21324589523838,5.97423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648540907100142,1.64736847912849,4.31304619582064,0,0.312037673114561,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87642439752332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.9014286036478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.87345025498471,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0.37456602987953,0.192075457214608,0.17230640686684,0,0.347652977834566,0.192909220463705,0,0.294397840268795,0.342869252385415,0.532427418478012,0,0,0.188218760830661,0.338458431566706,0.182927972872773,0,0.135804113845862,0.561142271657738,0,0,0.409231043169689,0.154936841185966,0.192906610981141,0,0.467863216890817,0.214871054048298,0,0,0 | ||
|short_description=p@chr9:46050688..46050713,+ | |||
}} | }} |
Latest revision as of 05:39, 5 August 2015
Short description: | p@chr9:46050688..46050713, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:46050688..46050713, + |
Coexpression cluster: | MCL_coexpression_mm9:191 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.44e-16 | 6 |
gut absorptive cell | 4.44e-16 | 6 |
enterocyte | 4.44e-16 | 6 |
columnar/cuboidal epithelial cell | 1.09e-13 | 7 |
intestinal epithelial cell | 1.70e-10 | 9 |
epithelial cell of alimentary canal | 1.70e-10 | 9 |
epithelial cell | 2.57e-09 | 25 |
M cell of gut | 2.87e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.60e-41 | 31 |
gastrointestinal system | 1.60e-25 | 47 |
mucosa | 3.61e-20 | 15 |
intestinal mucosa | 3.15e-15 | 13 |
wall of intestine | 3.15e-15 | 13 |
gastrointestinal system mucosa | 3.15e-15 | 13 |
organ component layer | 5.20e-14 | 24 |
digestive system | 1.18e-12 | 116 |
digestive tract | 1.18e-12 | 116 |
primitive gut | 1.18e-12 | 116 |
endoderm-derived structure | 2.43e-12 | 118 |
endoderm | 2.43e-12 | 118 |
presumptive endoderm | 2.43e-12 | 118 |
epithelium of mucosa | 1.70e-10 | 9 |
gastrointestinal system epithelium | 1.70e-10 | 9 |
intestinal epithelium | 1.70e-10 | 9 |
subdivision of digestive tract | 1.85e-10 | 114 |
simple columnar epithelium | 1.84e-08 | 11 |
gut-associated lymphoid tissue | 3.49e-07 | 2 |
mucosa-associated lymphoid tissue | 3.49e-07 | 2 |
lymphoid tissue | 3.49e-07 | 2 |