FFCP PHASE1:Mm9::chr9:46050877..46050884,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=191 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:46050877..46050884,+ | |||
|description=CAGE_peak_at_chr9:46050877..46050884,+ | |description=CAGE_peak_at_chr9:46050877..46050884,+ | ||
|id=chr9:46050877..46050884,+ | |id=chr9:46050877..46050884,+ | ||
|ontology_enrichment_celltype=CL:0000239!3.94e-13!6;CL:0000677!3.94e-13!6;CL:0000212!3.94e-13!6;CL:0000584!3.94e-13!6;CL:0000075!3.89e-11!7;CL:0002563!4.04e-11!9;CL:0002251!4.04e-11!9;CL:0000066!2.08e-10!25;CL:0000473!5.47e-08!3;CL:0000627!5.47e-08!3;CL:0000682!5.47e-08!3;CL:0000223!2.93e-07!20 | |ontology_enrichment_celltype=CL:0000239!3.94e-13!6;CL:0000677!3.94e-13!6;CL:0000212!3.94e-13!6;CL:0000584!3.94e-13!6;CL:0000075!3.89e-11!7;CL:0002563!4.04e-11!9;CL:0002251!4.04e-11!9;CL:0000066!2.08e-10!25;CL:0000473!5.47e-08!3;CL:0000627!5.47e-08!3;CL:0000682!5.47e-08!3;CL:0000223!2.93e-07!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.17e-14,3;CL:0000239,3.92e-12,6;CL:0000677,3.92e-12,6;CL:0000584,3.92e-12,6;CL:0000066,1.34e-10,25;CL:0000075,2.00e-10,7;CL:0002563,3.87e-08,9;CL:0002251,3.87e-08,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!9.26e-24!43;UBERON:0000344!6.54e-19!15;UBERON:0005409!1.23e-18!59;UBERON:0001242!7.89e-15!13;UBERON:0000060!7.89e-15!13;UBERON:0001262!7.89e-15!13;UBERON:0004786!7.89e-15!13;UBERON:0004923!1.32e-12!24;UBERON:0003350!4.04e-11!9;UBERON:0004808!4.04e-11!9;UBERON:0001277!4.04e-11!9;UBERON:0000485!6.87e-09!11;UBERON:0001007!2.43e-08!128;UBERON:0001555!2.43e-08!128;UBERON:0007026!2.43e-08!128;UBERON:0004119!4.19e-08!130;UBERON:0000925!4.19e-08!130;UBERON:0006595!4.19e-08!130;UBERON:0004921!7.71e-07!126;UBERON:0004185!7.71e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.47e-25,31;UBERON:0005409,4.15e-16,47;UBERON:0000344,4.03e-14,15;UBERON:0001962,1.32e-10,2;UBERON:0001961,1.32e-10,2;UBERON:0001744,1.32e-10,2;UBERON:0004923,1.54e-08,24;UBERON:0001007,1.98e-08,116;UBERON:0001555,1.98e-08,116;UBERON:0007026,1.98e-08,116;UBERON:0001242,2.08e-08,13;UBERON:0001262,2.08e-08,13;UBERON:0004786,2.08e-08,13;UBERON:0004119,3.07e-08,118;UBERON:0000925,3.07e-08,118;UBERON:0006595,3.07e-08,118;UBERON:0003350,3.87e-08,9;UBERON:0004808,3.87e-08,9;UBERON:0001277,3.87e-08,9;UBERON:0002465,2.44e-07,3 | |||
|phase1_expression=0,7.67745896806594,9.55498402718026,0.90739263392049,1.50268718983904,1.34303417529512,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.67963629408352,12.8469197397615,14.9300310669905,3.01533397311352,4.74036711908956,0,0.252030129759931,0.886922042621219,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03991400112325,0.539703191637817,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,1.58670339998127,0,0,0,0.403367049246685,0.889512175379481,1.14135375667535,3.79623249235609,5.10566759644434,3.51869292320377,2.58643413653496,2.53453313254856,0,1.51296634912286,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0.354951612318675,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0.429742108096597,0,0,0 | |phase1_expression=0,7.67745896806594,9.55498402718026,0.90739263392049,1.50268718983904,1.34303417529512,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.67963629408352,12.8469197397615,14.9300310669905,3.01533397311352,4.74036711908956,0,0.252030129759931,0.886922042621219,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03991400112325,0.539703191637817,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,1.58670339998127,0,0,0,0.403367049246685,0.889512175379481,1.14135375667535,3.79623249235609,5.10566759644434,3.51869292320377,2.58643413653496,2.53453313254856,0,1.51296634912286,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0.354951612318675,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0.429742108096597,0,0,0 | ||
|short_description=p@chr9:46050877..46050884,+ | |short_description=p@chr9:46050877..46050884,+ | ||
}} | }} |
Latest revision as of 05:40, 5 August 2015
Short description: | p@chr9:46050877..46050884, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:46050877..46050884, + |
Coexpression cluster: | MCL_coexpression_mm9:191 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.17e-14 | 3 |
brush border epithelial cell | 3.92e-12 | 6 |
gut absorptive cell | 3.92e-12 | 6 |
enterocyte | 3.92e-12 | 6 |
epithelial cell | 1.34e-10 | 25 |
columnar/cuboidal epithelial cell | 2.00e-10 | 7 |
intestinal epithelial cell | 3.87e-08 | 9 |
epithelial cell of alimentary canal | 3.87e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.47e-25 | 31 |
gastrointestinal system | 4.15e-16 | 47 |
mucosa | 4.03e-14 | 15 |
gut-associated lymphoid tissue | 1.32e-10 | 2 |
mucosa-associated lymphoid tissue | 1.32e-10 | 2 |
lymphoid tissue | 1.32e-10 | 2 |
organ component layer | 1.54e-08 | 24 |
digestive system | 1.98e-08 | 116 |
digestive tract | 1.98e-08 | 116 |
primitive gut | 1.98e-08 | 116 |
intestinal mucosa | 2.08e-08 | 13 |
wall of intestine | 2.08e-08 | 13 |
gastrointestinal system mucosa | 2.08e-08 | 13 |
endoderm-derived structure | 3.07e-08 | 118 |
endoderm | 3.07e-08 | 118 |
presumptive endoderm | 3.07e-08 | 118 |
epithelium of mucosa | 3.87e-08 | 9 |
gastrointestinal system epithelium | 3.87e-08 | 9 |
intestinal epithelium | 3.87e-08 | 9 |
lymphoid system | 2.44e-07 | 3 |