FFCP PHASE1:Mm9::chr9:48719172..48719183,-: Difference between revisions
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{{FFCP|EntrezGene=15561|HGNC=|MCL_coexpression_id=114|UniProt=E9QLC0,Q8K1F4,P23979|association_with_transcript=20bp_to_ENSMUST00000003826,NM_001099644,NM_013561,uc009pio.1,uc009pip.1_5end|description=CAGE_peak_1_at_Htr3a_5end|id=chr9:48719172..48719183,-|ontology_enrichment_celltype=CL:0000107!6.45e-11!9|ontology_enrichment_celltype_v019_2=CL:0000107,2.05e-32,9;CL:0000540,1.01e-07,33;CL:0000047,1.01e-07,33;CL:0000031,1.01e-07,33;CL:0000404,1.01e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!3.44e-15!102;UBERON:0000924!3.44e-15!102;UBERON:0006601!3.44e-15!102;UBERON:0002346!6.82e-14!71;UBERON:0003075!6.82e-14!71;UBERON:0007284!6.82e-14!71;UBERON:0000073!3.22e-13!75;UBERON:0001016!3.22e-13!75;UBERON:0001017!1.16e-12!73;UBERON:0005743!1.16e-12!73;UBERON:0002410!6.45e-11!9;UBERON:0000010!6.71e-11!11;UBERON:0002342!3.28e-09!10;UBERON:0005062!3.28e-09!10;UBERON:0000033!1.44e-07!63;UBERON:0003056!2.82e-07!49;UBERON:0001894!9.44e-07!10;UBERON:0006222!9.44e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.05e-32,9;UBERON:0000010,2.99e-26,11;UBERON:0000013,2.82e-12,3;UBERON:0010313,8.28e-12,3;UBERON:0002342,8.28e-12,3;UBERON:0002005,8.28e-12,3;UBERON:0005428,8.28e-12,3;UBERON:0005062,8.28e-12,3;UBERON:0000011,1.59e-11,3;UBERON:0001017,1.00e-10,73;UBERON:0001016,2.37e-10,75;UBERON:0004121,1.34e-08,95;UBERON:0000924,1.34e-08,95;UBERON:0006601,1.34e-08,95|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0.15279824777681,0,0,0.559198337475902,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,1.7813056687779,0.346970653532272,0.608930956624282,1.15307748628029,0.301445281105245,0.23517741427141,0.502666365318702,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0.149790639404823,0,0.376963056338593,1.04294592115366,1.02286182932132,0.41557608911912,0.162241263067758,0,0,0,0,0,0,0.180062129805349,0.150704817835715,1.63287597963187,0.512454881139399,0.0937017245597288,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.233530684734339,0.16455984991348,0,0,0,0,0,1.47202963994889,1.23485534855141,0,1.05780226665418,0,0,0,0,0.444756087689741,0.951128130562796,0.949058123089023,0.329397909448022,0.251335208800269,0.397912944082302,1.16978452271472,0.898819408654221,1.51296634912286,0.398282546508734,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0.321101179975584,0.586058432961016,0,0,2.83957397474631,3.90438744296638,6.89354872744957,1.67278158566786,2.67358408898873,4.24614796183249,8.90583543684768,9.9366991689846,13.4397844501818,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0.948110273807448,0,0,0.340439605753788,0,0.776152102696527,1.07168517515796,1.24138163549592,1.07021290561242,0.822745103010605,0.608929898229199,0,0,4.85162475720916,0,0,0,0,0,0.291480836629851,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0.404593039154462,0.0826534557253359,0,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.965947970160952,0,0,0.857473516316263,0,0.564751842617067,0.460325236507177,0.572895513439397,0.171853182343688,0,0,0,0.900642406448441,2.26571204492102,1.03552062350364,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0.561142271657738,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0,0,0,0,0,0.231867835620421|short_description=p1@Htr3a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:15561 | |||
|HGNC= | |||
|MCL_coexpression_id=114 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9QLC0,uniprot:Q8K1F4,uniprot:P23979 | |||
|association_with_transcript=20bp_to_ENSMUST00000003826,NM_001099644,NM_013561,uc009pio.1,uc009pip.1_5end | |||
|cluster_id=chr9:48719172..48719183,- | |||
|description=CAGE_peak_1_at_Htr3a_5end | |||
|id=chr9:48719172..48719183,- | |||
|ontology_enrichment_celltype=CL:0000107!6.45e-11!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,2.05e-32,9;CL:0000540,1.01e-07,33;CL:0000047,1.01e-07,33;CL:0000031,1.01e-07,33;CL:0000404,1.01e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.44e-15!102;UBERON:0000924!3.44e-15!102;UBERON:0006601!3.44e-15!102;UBERON:0002346!6.82e-14!71;UBERON:0003075!6.82e-14!71;UBERON:0007284!6.82e-14!71;UBERON:0000073!3.22e-13!75;UBERON:0001016!3.22e-13!75;UBERON:0001017!1.16e-12!73;UBERON:0005743!1.16e-12!73;UBERON:0002410!6.45e-11!9;UBERON:0000010!6.71e-11!11;UBERON:0002342!3.28e-09!10;UBERON:0005062!3.28e-09!10;UBERON:0000033!1.44e-07!63;UBERON:0003056!2.82e-07!49;UBERON:0001894!9.44e-07!10;UBERON:0006222!9.44e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.05e-32,9;UBERON:0000010,2.99e-26,11;UBERON:0000013,2.82e-12,3;UBERON:0010313,8.28e-12,3;UBERON:0002342,8.28e-12,3;UBERON:0002005,8.28e-12,3;UBERON:0005428,8.28e-12,3;UBERON:0005062,8.28e-12,3;UBERON:0000011,1.59e-11,3;UBERON:0001017,1.00e-10,73;UBERON:0001016,2.37e-10,75;UBERON:0004121,1.34e-08,95;UBERON:0000924,1.34e-08,95;UBERON:0006601,1.34e-08,95 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0.15279824777681,0,0,0.559198337475902,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,1.7813056687779,0.346970653532272,0.608930956624282,1.15307748628029,0.301445281105245,0.23517741427141,0.502666365318702,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0.149790639404823,0,0.376963056338593,1.04294592115366,1.02286182932132,0.41557608911912,0.162241263067758,0,0,0,0,0,0,0.180062129805349,0.150704817835715,1.63287597963187,0.512454881139399,0.0937017245597288,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.233530684734339,0.16455984991348,0,0,0,0,0,1.47202963994889,1.23485534855141,0,1.05780226665418,0,0,0,0,0.444756087689741,0.951128130562796,0.949058123089023,0.329397909448022,0.251335208800269,0.397912944082302,1.16978452271472,0.898819408654221,1.51296634912286,0.398282546508734,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0,0.167506257441816,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0.321101179975584,0.586058432961016,0,0,2.83957397474631,3.90438744296638,6.89354872744957,1.67278158566786,2.67358408898873,4.24614796183249,8.90583543684768,9.9366991689846,13.4397844501818,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0.948110273807448,0,0,0.340439605753788,0,0.776152102696527,1.07168517515796,1.24138163549592,1.07021290561242,0.822745103010605,0.608929898229199,0,0,4.85162475720916,0,0,0,0,0,0.291480836629851,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0.404593039154462,0.0826534557253359,0,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.965947970160952,0,0,0.857473516316263,0,0.564751842617067,0.460325236507177,0.572895513439397,0.171853182343688,0,0,0,0.900642406448441,2.26571204492102,1.03552062350364,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0.561142271657738,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p1@Htr3a | |||
}} |
Revision as of 06:24, 5 August 2015
Short description: | p1@Htr3a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Htr3a_5end |
Coexpression cluster: | MCL_coexpression_mm9:114 |
Association with transcript: | 20bp_to_ENSMUST00000003826, NM_001099644, NM_013561, uc009pio.1, uc009pip.1_5end |
EntrezGene: | 15561 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 2.05e-32 | 9 |
neuron | 1.01e-07 | 33 |
neuronal stem cell | 1.01e-07 | 33 |
neuroblast | 1.01e-07 | 33 |
electrically signaling cell | 1.01e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 2.05e-32 | 9 |
peripheral nervous system | 2.99e-26 | 11 |
sympathetic nervous system | 2.82e-12 | 3 |
neural crest-derived structure | 8.28e-12 | 3 |
neural crest | 8.28e-12 | 3 |
enteric nervous system | 8.28e-12 | 3 |
vagal neural crest | 8.28e-12 | 3 |
neural fold | 8.28e-12 | 3 |
parasympathetic nervous system | 1.59e-11 | 3 |
central nervous system | 1.00e-10 | 73 |
nervous system | 2.37e-10 | 75 |
ectoderm-derived structure | 1.34e-08 | 95 |
ectoderm | 1.34e-08 | 95 |
presumptive ectoderm | 1.34e-08 | 95 |