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FFCP PHASE1:Mm9::chr9:50411897..50411929,-: Difference between revisions

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{{FFCP|EntrezGene=66925|HGNC=|MCL_coexpression_id=79|UniProt=Q9CXV1|association_with_transcript=24bp_to_ENSMUST00000000175,NM_025848,uc009pjv.2_5end|description=CAGE_peak_1_at_Sdhd_5end|id=chr9:50411897..50411929,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!3.68e-11!47;UBERON:0000160!8.60e-09!43;UBERON:0005409!3.36e-08!59;UBERON:0000344!1.13e-07!15;UBERON:0009854!2.44e-07!23;UBERON:0009856!2.44e-07!23;UBERON:0002107!4.63e-07!22;UBERON:0007499!4.63e-07!22;UBERON:0006925!4.63e-07!22;UBERON:0009497!4.63e-07!22;UBERON:0000015!4.63e-07!22;UBERON:0002423!4.63e-07!22;UBERON:0006235!4.63e-07!22;UBERON:0008835!4.63e-07!22;UBERON:0003894!4.63e-07!22;UBERON:0004161!4.63e-07!22;UBERON:0008836!4.63e-07!22;UBERON:0007100!6.37e-07!18;UBERON:0000948!6.37e-07!18;UBERON:0005498!6.37e-07!18;UBERON:0004140!6.37e-07!18;UBERON:0009881!6.37e-07!18;UBERON:0004141!6.37e-07!18;UBERON:0003084!6.37e-07!18;UBERON:0007005!6.37e-07!18;UBERON:0004139!6.37e-07!18;UBERON:0004291!6.37e-07!18;UBERON:0001242!8.30e-07!13;UBERON:0000060!8.30e-07!13;UBERON:0001262!8.30e-07!13;UBERON:0004786!8.30e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.61e-12,31;UBERON:0003914,3.68e-11,47;UBERON:0005409,2.05e-10,47;UBERON:0000344,1.13e-07,15;UBERON:0009854,2.44e-07,23;UBERON:0009856,2.44e-07,23;UBERON:0002107,4.63e-07,22;UBERON:0007499,4.63e-07,22;UBERON:0006925,4.63e-07,22;UBERON:0009497,4.63e-07,22;UBERON:0000015,4.63e-07,22;UBERON:0002423,4.63e-07,22;UBERON:0006235,4.63e-07,22;UBERON:0008835,4.63e-07,22;UBERON:0003894,4.63e-07,22;UBERON:0004161,4.63e-07,22;UBERON:0008836,4.63e-07,22;UBERON:0007100,6.37e-07,18;UBERON:0000948,6.37e-07,18;UBERON:0005498,6.37e-07,18;UBERON:0004140,6.37e-07,18;UBERON:0009881,6.37e-07,18;UBERON:0004141,6.37e-07,18;UBERON:0003084,6.37e-07,18;UBERON:0007005,6.37e-07,18;UBERON:0004139,6.37e-07,18;UBERON:0004291,6.37e-07,18;UBERON:0001242,8.30e-07,13;UBERON:0001262,8.30e-07,13;UBERON:0004786,8.30e-07,13|phase1_expression=121.713123799643,370.960858320641,335.789438669478,206.280592111258,257.961300922369,168.718668271449,177.5456068526,61.0753319878656,35.7603354265234,29.4921303165712,54.6185318639361,71.1567658238401,54.099430658261,52.1025598417225,80.6125623593904,95.9732767427775,85.3465491316339,62.4615087409311,63.8953260602743,88.6974372257883,112.002013128959,174.553492211156,202.691036371814,322.864709197095,317.273035715896,565.04425268918,493.222485602141,386.339920205799,415.961265190002,417.361894882445,376.498407092707,69.2183434070998,73.1927097225638,47.5445043046316,309.648936373366,399.12938350574,317.483348987984,198.383992969294,238.307280079759,204.697783893755,171.763594505056,178.274871574154,160.218416500281,85.3580425874414,89.5158302668314,71.2161398387324,92.3221786330686,94.1868675563529,93.1469414794161,87.4934545834275,91.131160478111,84.8140129753332,51.0059122415519,39.1695556686126,35.9620365082436,74.3479770143887,69.0545590252404,104.165762640043,56.6486090406874,66.1238724090041,47.5373552629634,87.083044741767,88.0401848150028,76.4914759689189,97.8977698941305,93.7833751728852,65.912024314049,62.6275837674134,46.6603255388149,54.542399086003,53.6328651446024,114.831695730329,123.686382932904,55.1208596467293,52.1399362339206,44.122501757281,96.9019752794621,85.1674545028202,86.3268716900088,61.0633512190797,62.4860605804458,56.7795573906868,112.231565598555,121.556723766843,90.6093609316484,85.14766120189,95.5313978161981,82.9477533922588,86.1006818198303,85.0180051201337,42.0303508617433,413.863884828047,223.030597456142,351.886480947857,329.436643645968,279.12075066164,265.580398469143,84.1925793535605,91.7044596248127,95.4016851177919,119.294376550848,41.0644727725817,22.9324715735981,7.11066703153331,95.6890401269566,95.5166692841122,72.289995637114,251.889638660246,46.6088190564909,82.6822714591074,111.030609130327,117.523674628487,124.301753021016,150.722640552623,99.0096914082634,179.703225601436,118.406389544765,381.308504197807,81.3841707793884,157.075611298934,156.576636588419,123.643189549482,214.35052540084,78.1724728020831,101.581652804526,328.517772998249,140.303510796433,221.364107736567,182.472846076921,98.5622407283733,75.4875994650734,61.3193238310778,81.0021332096008,91.290418266928,86.439826536777,90.6928660548765,86.4616199089185,105.870331989189,98.3091530306995,67.7622775954446,100.713222853133,108.973597501466,72.5650383115557,89.6693666122505,67.4241706589659,84.9393965488554,73.1810468811482,75.2826808850536,97.8678687915104,62.2159003752125,66.5095249339727,80.6640295333475,70.6240013033019,63.3818943070343,67.4965407418054,81.6040493955822,216.98387487979,187.606624286627,219.374221533398,170.257385024183,229.366486661512,275.494954035353,205.967919959133,340.205356691261,373.63494741323,444.60490236278,421.994060401601,413.34931197978,460.767579757745,591.987875469217,540.728959670858,644.157144596014,599.591364859859,549.306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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:66925
|HGNC=
|MCL_coexpression_id=79
|TSSclassifier=NA
|UniProt=uniprot:Q9CXV1
|association_with_transcript=24bp_to_ENSMUST00000000175,NM_025848,uc009pjv.2_5end
|cluster_id=chr9:50411897..50411929,-
|description=CAGE_peak_1_at_Sdhd_5end
|id=chr9:50411897..50411929,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003914!3.68e-11!47;UBERON:0000160!8.60e-09!43;UBERON:0005409!3.36e-08!59;UBERON:0000344!1.13e-07!15;UBERON:0009854!2.44e-07!23;UBERON:0009856!2.44e-07!23;UBERON:0002107!4.63e-07!22;UBERON:0007499!4.63e-07!22;UBERON:0006925!4.63e-07!22;UBERON:0009497!4.63e-07!22;UBERON:0000015!4.63e-07!22;UBERON:0002423!4.63e-07!22;UBERON:0006235!4.63e-07!22;UBERON:0008835!4.63e-07!22;UBERON:0003894!4.63e-07!22;UBERON:0004161!4.63e-07!22;UBERON:0008836!4.63e-07!22;UBERON:0007100!6.37e-07!18;UBERON:0000948!6.37e-07!18;UBERON:0005498!6.37e-07!18;UBERON:0004140!6.37e-07!18;UBERON:0009881!6.37e-07!18;UBERON:0004141!6.37e-07!18;UBERON:0003084!6.37e-07!18;UBERON:0007005!6.37e-07!18;UBERON:0004139!6.37e-07!18;UBERON:0004291!6.37e-07!18;UBERON:0001242!8.30e-07!13;UBERON:0000060!8.30e-07!13;UBERON:0001262!8.30e-07!13;UBERON:0004786!8.30e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.61e-12,31;UBERON:0003914,3.68e-11,47;UBERON:0005409,2.05e-10,47;UBERON:0000344,1.13e-07,15;UBERON:0009854,2.44e-07,23;UBERON:0009856,2.44e-07,23;UBERON:0002107,4.63e-07,22;UBERON:0007499,4.63e-07,22;UBERON:0006925,4.63e-07,22;UBERON:0009497,4.63e-07,22;UBERON:0000015,4.63e-07,22;UBERON:0002423,4.63e-07,22;UBERON:0006235,4.63e-07,22;UBERON:0008835,4.63e-07,22;UBERON:0003894,4.63e-07,22;UBERON:0004161,4.63e-07,22;UBERON:0008836,4.63e-07,22;UBERON:0007100,6.37e-07,18;UBERON:0000948,6.37e-07,18;UBERON:0005498,6.37e-07,18;UBERON:0004140,6.37e-07,18;UBERON:0009881,6.37e-07,18;UBERON:0004141,6.37e-07,18;UBERON:0003084,6.37e-07,18;UBERON:0007005,6.37e-07,18;UBERON:0004139,6.37e-07,18;UBERON:0004291,6.37e-07,18;UBERON:0001242,8.30e-07,13;UBERON:0001262,8.30e-07,13;UBERON:0004786,8.30e-07,13
|phase1_expression=121.713123799643,370.960858320641,335.789438669478,206.280592111258,257.961300922369,168.718668271449,177.5456068526,61.0753319878656,35.7603354265234,29.4921303165712,54.6185318639361,71.1567658238401,54.099430658261,52.1025598417225,80.6125623593904,95.9732767427775,85.3465491316339,62.4615087409311,63.8953260602743,88.6974372257883,112.002013128959,174.553492211156,202.691036371814,322.864709197095,317.273035715896,565.04425268918,493.222485602141,386.339920205799,415.961265190002,417.361894882445,376.498407092707,69.2183434070998,73.1927097225638,47.5445043046316,309.648936373366,399.12938350574,317.483348987984,198.383992969294,238.307280079759,204.697783893755,171.763594505056,178.274871574154,160.218416500281,85.3580425874414,89.5158302668314,71.2161398387324,92.3221786330686,94.1868675563529,93.1469414794161,87.4934545834275,91.131160478111,84.8140129753332,51.0059122415519,39.1695556686126,35.9620365082436,74.3479770143887,69.0545590252404,104.165762640043,56.6486090406874,66.1238724090041,47.5373552629634,87.083044741767,88.0401848150028,76.4914759689189,97.8977698941305,93.7833751728852,65.912024314049,62.6275837674134,46.6603255388149,54.542399086003,53.6328651446024,114.831695730329,123.686382932904,55.1208596467293,52.1399362339206,44.122501757281,96.9019752794621,85.1674545028202,86.3268716900088,61.0633512190797,62.4860605804458,56.7795573906868,112.231565598555,121.556723766843,90.6093609316484,85.14766120189,95.5313978161981,82.9477533922588,86.1006818198303,85.0180051201337,42.0303508617433,413.863884828047,223.030597456142,351.886480947857,329.436643645968,279.12075066164,265.580398469143,84.1925793535605,91.7044596248127,95.4016851177919,119.294376550848,41.0644727725817,22.9324715735981,7.11066703153331,95.6890401269566,95.5166692841122,72.289995637114,251.889638660246,46.6088190564909,82.6822714591074,111.030609130327,117.523674628487,124.301753021016,150.722640552623,99.0096914082634,179.703225601436,118.406389544765,381.308504197807,81.3841707793884,157.075611298934,156.576636588419,123.643189549482,214.35052540084,78.1724728020831,101.581652804526,328.517772998249,140.303510796433,221.364107736567,182.472846076921,98.5622407283733,75.4875994650734,61.3193238310778,81.0021332096008,91.290418266928,86.439826536777,90.6928660548765,86.4616199089185,105.870331989189,98.3091530306995,67.7622775954446,100.713222853133,108.973597501466,72.5650383115557,89.6693666122505,67.4241706589659,84.9393965488554,73.1810468811482,75.2826808850536,97.8678687915104,62.2159003752125,66.5095249339727,80.6640295333475,70.6240013033019,63.3818943070343,67.4965407418054,81.6040493955822,216.98387487979,187.606624286627,219.374221533398,170.257385024183,229.366486661512,275.494954035353,205.967919959133,340.205356691261,373.63494741323,444.60490236278,421.994060401601,413.34931197978,460.767579757745,591.987875469217,540.728959670858,644.157144596014,599.591364859859,549.306871986202,81.5925000428814,67.0938072712934,403.110915240234,357.008264995785,108.563719522434,90.3400653537106,112.63016119551,177.078134619295,250.397677369324,319.008374990762,379.148720174065,396.595082975418,327.992447484352,308.780444607866,277.433895970508,298.408043673202,369.163789185978,371.995898439158,108.30037144421,101.681176222659,112.70773567308,149.683725966306,142.749030555373,161.242249927842,207.226132156191,322.380563187451,384.80388193921,407.08724377802,380.645173179899,120.46216632702,132.480762706299,161.22613457994,134.0905402378,175.335795140007,242.403810895912,215.484406950657,272.549316208834,289.387729500238,208.463899464664,295.85205339646,326.703443750945,362.198110976158,395.212501988773,485.820626012911,65.5873825091447,120.137555062487,74.9638891633319,89.4556602035241,72.0499062245702,79.3979660274207,89.0283216913691,73.9556525381058,71.8816257124231,83.9351173768857,66.1737289928571,78.3266644341228,88.4147107153385,82.3053143328801,85.9510318453852,114.764099285748,79.1740479560648,90.2313160416475,107.889996471796,109.475715277118,68.5248071674503,366.082844446341,65.9412178579976,64.4223928089453,54.7175430241309,55.6797299229446,49.4613056462915,40.1968673720142,63.5552801629584,59.9124508718189,63.2460444714438,61.0510501201433,71.3958628597591,102.031590901337,86.6558623761025,60.2140948849754,61.0627636363829,117.748608535166,137.859541975926,101.658137988429,98.0402284364166,86.0818414242997,142.135561242522,92.3375672872864,98.3932764341831,82.1695570633122,98.0393059747489,76.3203020036583,61.6195686414356,90.2106081096864,95.5960673154556,84.2344547674158,71.290773924194,90.6113593418519,92.6410985989941,92.5573445308382,86.1245168593817,73.9293927314732,91.0782283966993,33.9665681059449,77.8258536674265,81.4224486530104,66.7291402977533,48.093283625303,293.81268332289,88.0770184549921,74.3288331470659,95.557119866972,96.6715432869895,105.674704379632,77.2322386623792,90.8249347629895,128.673671505348,120.358248998346,124.379976423981,245.350348829884,76.2369744530536,82.3443841863737,139.758911023411,138.834628553607,174.25332586945,169.794212098489,167.455901299531,265.944037055774,333.110481359908,111.21973704256,97.5188783923649,76.1039219363852,110.526271625341,69.6135254271691,98.4197854900311,86.84344850226,76.3995623583858,70.3103678157331,68.1585738767121,100.257410142793,93.6097520338063,72.0505355032246,130.352313431576,124.6911019981,112.51143269877,81.6361732243715,81.2606741055373,89.9061962409367,85.3645467069056,92.7881675023477,87.1043800066648,79.7535124432409,69.1950953252242,70.1384325558002,65.1004345151339,222.875967093753,64.8198983852269,60.8259947812245,48.3507695128546,82.6851462457775,85.0201613793854,81.8687760474675,56.8076204559525,77.242104021446,74.5472432254528,95.2873239569856,91.6632821503035,78.7087575134089,76.7292422143119,52.877572817279,82.3527450282803,77.4552469545659,69.7839309835675,71.968683333503,87.9078834037976,70.2283777185815,89.6351430209204,93.3529793542249,103.339289175595,150.567833420562,193.799146643008,181.516885427466,170.408100293254,186.490542281683,185.039888919875,186.928704313602,180.072618864584,177.029546399464,182.931968623628,183.373071143983,170.349959138938,192.716311243241,195.740802881571,200.779327063318,199.892774140697,226.814080271633,207.677921444117,211.333689783406,205.158449305421,211.621134337083,216.586719881363,225.713812413669,202.348129630334,189.666087820316,186.138343436829,178.588626546897,202.160135325827,193.671051482457,152.010409453139,89.9318080576605,189.01673962389,157.930224725499,194.540233714014,218.38550492832,318.122670471218
|short_description=p1@Sdhd
}}

Revision as of 06:52, 5 August 2015

Short description:p1@Sdhd
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sdhd_5end
Coexpression cluster:MCL_coexpression_mm9:79
Association with transcript: 24bp_to_ENSMUST00000000175, NM_025848, uc009pjv.2_5end
EntrezGene:66925
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sdhd

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7121.71
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5370.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6335.79
CD326+ enterocyte, pool1.CNhs13542.11848-124I3206.28
CD326+ enterocyte, pool2.CNhs13197.11849-124I4257.96
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7168.72
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8177.55
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E961.08
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E735.76
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F229.49
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E654.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F171.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E454.10
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E852.10
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A180.61
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A395.97
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A585.35
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A262.46
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A463.90
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A688.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3112.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2174.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9202.69
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1322.86
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2317.27
GP2+ M cell, pool1.CNhs13228.11845-124H9565.04
GP2+ M cell, pool2.CNhs13231.11846-124I1493.22
GP2+ M cell, pool3.CNhs13240.11847-124I2386.34
Ileum epithelium, pool1.CNhs13199.10252-104B9415.96
Ileum epithelium, pool2.CNhs13232.10253-104C1417.36
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8376.50
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I369.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G673.19
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5309.65
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6399.13
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7317.48
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8198.38
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1238.31
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3204.70
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9171.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2178.27
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4160.22
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D885.36
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D989.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B371.22
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B792.32
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C294.19
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B893.15
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C387.49
Mouse Astrocytes, donor2.CNhs12078.11552-120C491.13
Mouse Astrocytes, donor3.CNhs12107.11633-122C484.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A251.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I939.17
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A135.96
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C174.35
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E169.05
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5104.17
Mouse Granule cells, donor1.CNhs12131.11713-123C356.65
Mouse Granule cells, donor2.CNhs12357.11731-123E366.12
Mouse Granule cells, donor3.CNhs12108.11636-122C747.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C687.08
Mouse Meningeal cells, donor3.CNhs12109.11639-122D188.04
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C776.49
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E797.90
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D293.78
Mouse Microglia, donor1.CNhs12629.11718-123C865.91
Mouse Microglia, donor2.CNhs12634.11736-123E862.63
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D546.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F554.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D953.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1114.83
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5123.69
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D255.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F252.14
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D644.12
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D396.90
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F385.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D786.33
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D461.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F462.49
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D856.78
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4112.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5121.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I690.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D685.15
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F695.53
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E182.95
Mouse Schwann, donor1.CNhs12507.11728-123D986.10
Mouse Schwann, donor2.CNhs12573.11746-123F985.02
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G342.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7413.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C4223.03
Mouse hepatocyte, donor3.CNhs12615.11637-122C8351.89
Mouse hepatocyte, donor6.CNhs13090.11822-124F4329.44
Mouse hepatocyte, donor8.CNhs13091.11824-124F6279.12
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7265.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I784.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E391.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I895.40
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6119.29
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H141.06
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I822.93
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G195.69
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G295.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G372.29
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6251.89
accessory axillary lymph node, adult.CNhs10475.1063-29H946.61
adrenal gland, adult.CNhs10508.49-24D782.68
adrenal gland, embryo E14.CNhs11038.406-44C5111.03
adrenal gland, embryo E16.CNhs11004.1254-43D6117.52
adrenal gland, embryo E17.CNhs11043.1263-45I1124.30
adrenal gland, embryo E18.CNhs11026.1262-18F5150.72
adrenal gland, neonate N00.CNhs11191.1311-23C199.01
adrenal gland, neonate N25.CNhs11223.1377-27I3179.70
amnion, adult pregnant day17.5.CNhs10488.583-22A8118.41
aorta, adult.CNhs10498.46-23H1381.31
bone (os femoris), adult.CNhs10483.56-12G281.38
bone (os femoris), neonate N02.CNhs11227.1985-43F5157.08
bone (os femoris), neonate N16.CNhs11225.1525-43A6156.58
bone (os femoris), neonate N20.CNhs11195.1350-25C3123.64
cecum, adult.CNhs10467.37-13H4214.35
cerebellum, adult.CNhs10494.15-8B278.17
cerebellum, neonate N30.CNhs11135.1395-42I2101.58
colon, adult.CNhs10468.36-18H7328.52
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7140.30
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1221.36
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4182.47
corpora quadrigemina, adult.CNhs10501.16-22A498.56
corpus striatum, adult.CNhs10487.19-21D875.49
corpus striatum, neonate N00.CNhs11226.630-43F161.32
cortex, adult.CNhs10473.12-14D581.00
cortex, neonate N30.CNhs11107.1392-42F291.29
diencephalon, adult.CNhs10482.20-12F286.44
diencephalon, neonate N30.CNhs11201.1388-42B290.69
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B186.46
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2105.87
epididymis, adult.CNhs10490.58-23B298.31
eyeball, adult.CNhs10484.31-12G467.76
eyeball, embryo E12.CNhs11016.345-16C6100.71
eyeball, embryo E14.CNhs10521.399-16E2108.97
eyeball, embryo E15.CNhs10593.426-16C972.57
eyeball, embryo E17.CNhs11023.1261-18D489.67
eyeball, neonate N00.CNhs11207.633-15C667.42
eyeball, neonate N01.CNhs11140.1532-43E784.94
eyeball, neonate N02.CNhs11205.1551-44G873.18
eyeball, neonate N16.CNhs11188.777-19A275.28
forelimb, embryo E11.CNhs10596.335-25E297.87
forelimb, embryo E12.CNhs10600.359-14H262.22
forelimb, embryo E13.CNhs10589.384-1E266.51
forelimb, embryo E14.CNhs10577.413-26A880.66
forelimb, embryo E15.CNhs11007.437-20E770.62
forelimb, embryo E17.CNhs10598.1517-43C463.38
forelimb, embryo E18.CNhs11008.1520-43B567.50
gonad, embryo E13.CNhs11044.1564-45I681.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8216.98
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2187.61
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5219.37
heart, embryo E11.CNhs10586.331-24E9170.26
heart, embryo E12.CNhs11015.353-12F5229.37
heart, embryo E13.CNhs11013.376-3I9275.49
heart, embryo E14.CNhs10597.403-26D4205.97
heart, embryo E15.CNhs11017.431-16C8340.21
heart, embryo E16.CNhs11021.457-17C6373.63
heart, embryo E17.CNhs11025.479-18E5444.60
heart, embryo E18.CNhs11030.1283-20G3421.99
heart, neonate N00.CNhs11213.639-21E3413.35
heart, neonate N03.CNhs11221.1349-25I2460.77
heart, neonate N10.CNhs11118.749-24G1591.99
heart, neonate N16.CNhs11209.782-15G1540.73
heart, neonate N20.CNhs11127.821-26I6644.16
heart, neonate N25.CNhs11196.1351-25D3599.59
heart, neonate N30.CNhs11202.1390-42D2549.31
hippocampus, adult.CNhs10478.13-16E881.59
hippocampus, neonate N00.CNhs11228.627-43G167.09
intestinal mucosa, adult.CNhs10506.860-29I3403.11
intestine, adult.CNhs10496.178-9A3357.01
intestine, embryo E12.CNhs11019.1251-16I5108.56
intestine, embryo E13.CNhs11010.381-16D590.34
intestine, embryo E15.CNhs10602.976-16D8112.63
intestine, embryo E16.CNhs10585.463-22H4177.08
intestine, embryo E17.CNhs10582.482-18D3250.40
intestine, embryo E18.CNhs10526.1289-20F7319.01
intestine, neonate N00.CNhs11126.644-26D1379.15
intestine, neonate N01.CNhs11192.1322-23E9396.60
intestine, neonate N06.CNhs11102.688-20B8327.99
intestine, neonate N07.CNhs11095.720-20F2308.78
intestine, neonate N10.CNhs11098.755-23A5277.43
intestine, neonate N20.CNhs11187.827-18D1298.41
intestine, neonate N25.CNhs11121.1352-25E3369.16
intestine, neonate N30.CNhs11131.1384-42G1372.00
kidney, embryo E14.CNhs10606.411-4I9108.30
kidney, embryo E15.CNhs10997.434-16F8101.68
kidney, embryo E16.CNhs10584.464-22A5112.71
kidney, embryo E17.CNhs11028.483-18I2149.68
kidney, embryo E18.CNhs11001.1288-20C7142.75
kidney, neonate N00.CNhs11214.646-21G7161.24
kidney, neonate N10.CNhs11206.758-6D5207.23
kidney, neonate N20.CNhs11113.832-19I1322.38
kidney, neonate N25.CNhs11122.1353-25F3384.80
kidney, neonate N30.CNhs11203.1385-42H1407.09
liver, adult pregnant day01.CNhs10466.508-5B2380.65
liver, embryo E12.CNhs10601.355-15F8120.46
liver, embryo E13.CNhs10524.378-3H6132.48
liver, embryo E14.CNhs10594.409-16E1161.23
liver, embryo E15.CNhs10520.433-16D7134.09
liver, embryo E16.CNhs10523.462-17F5175.34
liver, embryo E17.CNhs10510.481-18A3242.40
liver, embryo E18.CNhs10579.499-43G4215.48
liver, neonate N00.CNhs11117.641-24F4272.55
liver, neonate N03.CNhs11123.1345-25G2289.39
liver, neonate N06.CNhs11101.684-20A8208.46
liver, neonate N07.CNhs11103.716-20H2295.85
liver, neonate N10.CNhs11115.751-24B9326.70
liver, neonate N20.CNhs11220.823-25A3362.20
liver, neonate N25.CNhs11198.1368-26H1395.21
liver, neonate N30.CNhs11106.1382-42D1485.82
lung, adult.CNhs10474.28-22B165.59
lung, embryo E12.CNhs10522.354-16G2120.14
lung, embryo E14.CNhs10604.404-26F874.96
lung, embryo E15.CNhs11020.432-17C589.46
lung, embryo E16.CNhs10998.458-17B672.05
lung, embryo E17.CNhs10605.480-44A679.40
lung, embryo E18.CNhs10583.1287-20I689.03
lung, neonate N00.CNhs11224.640-42C673.96
lung, neonate N06.CNhs11212.683-20E571.88
lung, neonate N07.CNhs11111.715-19A383.94
lung, neonate N10.CNhs11219.750-23E666.17
lung, neonate N20.CNhs11109.822-18A478.33
lung, neonate N25.CNhs11119.1359-25C788.41
lung, neonate N30.CNhs11133.1394-42H282.31
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A185.95
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1114.76
mammary gland, adult lactating day02.CNhs10480.595-22B679.17
mammary gland, adult pregnant day19.CNhs10476.588-5H290.23
medulla oblongata, adult.CNhs10477.17-12C2107.89
medulla oblongata, neonate N30.CNhs11200.1396-42A3109.48
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C768.52
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2366.08
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E165.94
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E264.42
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E354.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D755.68
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D849.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D940.20
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D463.56
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D559.91
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D663.25
olfactory brain, adult.CNhs10489.18-22I961.05
ovary, adult.CNhs10507.91-2I771.40
ovary, embryo E18.CNhs11040.505-44H7102.03
ovary, neonate N00.CNhs11217.1299-22I486.66
oviduct, adult pregnant day01.CNhs10500.988-6G660.21
pancreas, adult.CNhs10486.34-16E461.06
pancreas, embryo E14.CNhs11012.405-44F4117.75
pancreas, embryo E15.CNhs11042.1556-45F2137.86
pancreas, embryo E16.CNhs11003.460-26E5101.66
pancreas, embryo E17.CNhs10599.1558-45G398.04
pancreas, embryo E18.CNhs10580.1535-43I786.08
pancreas, neonate N00.CNhs11105.645-26G9142.14
pancreas, neonate N01.CNhs11138.1531-43D792.34
pancreas, neonate N02.CNhs11139.1539-43D898.39
pancreas, neonate N16.CNhs11136.787-43B682.17
pancreas, neonate N25.CNhs11094.1555-45E298.04
pancreas, neonate N30.CNhs11182.1548-44H576.32
pituitary gland, adult.CNhs10493.21-1G861.62
pituitary gland, embryo E12.CNhs11018.346-16E690.21
pituitary gland, embryo E13.CNhs11009.370-44C795.60
pituitary gland, embryo E14.CNhs11037.398-44A584.23
pituitary gland, embryo E15.CNhs10592.427-16B971.29
pituitary gland, embryo E16.CNhs11036.449-43F690.61
pituitary gland, embryo E17.CNhs11039.1265-44F592.64
pituitary gland, neonate N00.CNhs11190.1308-22E992.56
placenta, adult pregnant day10.CNhs10472.539-13I786.12
placenta, adult pregnant day17.CNhs10464.577-18G373.93
prostate, adult.CNhs10470.859-1F891.08
skin, adult.CNhs10492.30-1C333.97
skin, neonate N00.CNhs11124.650-25G477.83
skin, neonate N03.CNhs11215.662-22H381.42
skin, neonate N06.CNhs11097.693-20I566.73
skin, neonate N10.CNhs11108.762-6C448.09
small intestine, neonate N16.CNhs11114.790-21I1293.81
spinal cord, adult.CNhs10505.24-13C988.08
spleen, adult.CNhs10465.25-2G274.33
spleen, embryo E16.CNhs11035.461-43C195.56
spleen, embryo E18.CNhs11011.1271-21F296.67
spleen, neonate N10.CNhs11116.752-24D1105.67
spleen, neonate N20.CNhs11112.824-19H177.23
spleen, neonate N25.CNhs11099.1354-25G390.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6128.67
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9120.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3124.38
stomach, adult.CNhs10503.33-1H6245.35
stomach, embryo E12.CNhs10588.356-43E376.24
stomach, embryo E15.CNhs10603.1252-16G882.34
stomach, embryo E16.CNhs11022.459-17D4139.76
stomach, embryo E17.CNhs11006.1035-18D5138.83
stomach, embryo E18.CNhs10999.1286-20C6174.25
stomach, neonate N03.CNhs11193.1340-24B8169.79
stomach, neonate N07.CNhs11210.718-18A9167.46
stomach, neonate N25.CNhs11104.1355-25E4265.94
stomach, neonate N30.CNhs11134.1386-42I1333.11
submandibular gland, adult.CNhs10469.59-29C1111.22
testis, adult.CNhs10504.57-7G597.52
testis, embryo E13.CNhs11031.389-23F576.10
testis, embryo E15.CNhs11034.443-27C5110.53
testis, embryo E16.CNhs11033.470-26G569.61
testis, embryo E17.CNhs11029.486-18I598.42
testis, embryo E18.CNhs11027.503-18G586.84
testis, neonate N00.CNhs11189.1300-22B776.40
testis, neonate N07.CNhs11222.726-26I470.31
testis, neonate N10.CNhs11204.763-44D968.16
testis, neonate N20.CNhs11110.839-18H3100.26
testis, neonate N30.CNhs11130.1391-42E293.61
thymus, adult.CNhs10471.38-12B572.05
thymus, embryo E14.CNhs11041.402-44I4130.35
thymus, embryo E15.CNhs11005.430-45I2124.69
thymus, embryo E16.CNhs11002.456-26C5112.51
thymus, embryo E17.CNhs10581.478-18C181.64
thymus, embryo E18.CNhs10595.1273-19G481.26
thymus, neonate N02.CNhs11181.1541-43F889.91
thymus, neonate N03.CNhs11137.2104-43C785.36
thymus, neonate N06.CNhs11197.681-26C492.79
thymus, neonate N07.CNhs11211.713-19D387.10
thymus, neonate N10.CNhs11194.748-24E479.75
thymus, neonate N20.CNhs11186.820-7A269.20
thymus, neonate N25.CNhs11125.1362-25G770.14
thymus, neonate N30.CNhs11132.1393-42G265.10
tongue, adult.CNhs10499.32-1B4222.88
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H364.82
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F760.83
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G548.35
urinary bladder, adult.CNhs10481.879-12E482.69
uterus, adult pregnant day19.CNhs10497.590-15F585.02
uterus, adult.CNhs10509.92-27E581.87
vagina, adult.CNhs10502.89-27D556.81
vesicular gland, adult.CNhs10491.51-27F877.24
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A174.55
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A295.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A391.66
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D778.71
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A476.73
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A552.88
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A682.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A777.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A869.78
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A971.97
whole body, embryo E11.CNhs11014.324-5I887.91
whole body, embryo E12.CNhs10587.857-27C970.23
whole body, embryo E13.CNhs10512.372-23H289.64
whole body, embryo E14.5.CNhs10578.420-27D293.35
whole body, embryo E14.CNhs10519.395-14B1103.34
whole body, embryo E16.CNhs10514.453-14F2150.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5193.80
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5181.52
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5170.41
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5186.49
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5185.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5186.93
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5180.07
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5177.03
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5182.93
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5183.37
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5170.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5192.72
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5195.74
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5200.78
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5199.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5226.81
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5207.68
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5211.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5205.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5211.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5216.59
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5225.71
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5202.35
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5189.67
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5186.14
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5178.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5202.16
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5193.67
whole body, embryo E17.5.CNhs10513.490-9F9152.01
whole body, embryo E17.CNhs10517.475-3I589.93
whole body, embryo E18.CNhs10516.493-3B3189.02
whole body, neonate N00.CNhs10525.657-19C2157.93
whole body, neonate N01.CNhs10576.659-23C6194.54
whole body, neonate N06.CNhs10515.692-21D1218.39
whole body, neonate N10.CNhs10518.761-6B4318.12





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
intestine2.61e-1231
epithelial tube3.68e-1147
gastrointestinal system2.05e-1047
mucosa1.13e-0715
digestive tract diverticulum2.44e-0723
sac2.44e-0723
liver4.63e-0722
epithelial sac4.63e-0722
digestive gland4.63e-0722
epithelium of foregut-midgut junction4.63e-0722
anatomical boundary4.63e-0722
hepatobiliary system4.63e-0722
foregut-midgut junction4.63e-0722
hepatic diverticulum4.63e-0722
liver primordium4.63e-0722
septum transversum4.63e-0722
liver bud4.63e-0722
primary circulatory organ6.37e-0718
heart6.37e-0718
primitive heart tube6.37e-0718
primary heart field6.37e-0718
anterior lateral plate mesoderm6.37e-0718
heart tube6.37e-0718
heart primordium6.37e-0718
cardiac mesoderm6.37e-0718
cardiogenic plate6.37e-0718
heart rudiment6.37e-0718
intestinal mucosa8.30e-0713
wall of intestine8.30e-0713
gastrointestinal system mucosa8.30e-0713
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