FFCP PHASE1:Mm9::chr9:50564531..50564547,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=310|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:50564531..50564547,+|id=chr9:50564531..50564547,+|ontology_enrichment_celltype=CL:0000055!1.40e-09!50;CL:0000333!8.90e-08!10;CL:0000095!8.90e-08!10;CL:0000243!8.90e-08!10;CL:0000123!8.90e-08!10;CL:0000125!8.90e-08!10;CL:0000030!8.90e-08!10;CL:0000339!8.90e-08!10;CL:0000221!2.83e-07!44;CL:0000133!2.83e-07!44;CL:0002319!6.04e-07!43;CL:0002321!8.61e-07!70;CL:0000220!8.61e-07!70|ontology_enrichment_celltype_v019_2=CL:0000333,8.47e-20,10;CL:0000095,8.47e-20,10;CL:0000243,8.47e-20,10;CL:0000123,8.47e-20,10;CL:0000125,8.47e-20,10;CL:0000030,8.47e-20,10;CL:0000339,8.47e-20,10;CL:0002453,1.00e-14,8;CL:0000128,2.00e-14,6;CL:0000126,2.00e-14,6;CL:0000127,2.00e-14,6;CL:0002319,8.04e-10,43;CL:0000221,1.54e-09,44;CL:0000133,1.54e-09,44;CL:0002321,3.21e-08,70;CL:0002605,6.90e-08,2;CL:0002604,6.90e-08,2;CL:0000708,1.25e-07,2;CL:0000217,8.04e-07,2;CL:0000328,8.04e-07,2;CL:0002573,8.04e-07,2;CL:0002376,8.04e-07,2;CL:0000218,8.04e-07,2;CL:0000692,8.04e-07,2;CL:0002377,8.04e-07,2;CL:0002375,8.04e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!1.74e-11!23;UBERON:0001009!1.74e-11!23;UBERON:0007100!6.88e-10!18;UBERON:0000948!6.88e-10!18;UBERON:0005498!6.88e-10!18;UBERON:0004140!6.88e-10!18;UBERON:0009881!6.88e-10!18;UBERON:0004141!6.88e-10!18;UBERON:0003084!6.88e-10!18;UBERON:0007005!6.88e-10!18;UBERON:0004139!6.88e-10!18;UBERON:0004291!6.88e-10!18;UBERON:0004121!5.68e-09!102;UBERON:0000924!5.68e-09!102;UBERON:0006601!5.68e-09!102;UBERON:0004872!6.69e-08!33|ontology_enrichment_uberon_v019_2=UBERON:0003210,1.25e-07,2;UBERON:0004121,4.79e-07,95;UBERON:0000924,4.79e-07,95;UBERON:0006601,4.79e-07,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38486499773135,1.11514624341466,0.183546752161682,0,7.19483016055474,3.29529274101708,7.19390626574849,3.3596741190087,7.18762821824858,0,0,0,0.514518872071894,0.573066879877513,4.64104883049698,0,0,0,2.71075625655306,2.66788438833342,0,0,0,0.299600110518405,1.15265491596466,0,0.135005938331691,0,0,0.441737081903227,0,0,0,1.10115880999389,0.893811366596314,0.153606533256243,0,0.0914876436024097,0,1.3959149950069,0.56276261003168,0.30559649555362,0,0.284743361598206,0,1.74170244666323,1.058001841495,0.869593466105033,0,0,0,0,0.448026887097336,0.702222100658759,0,0.779358013808606,0,0.281686839553361,0,0,0,0,0.253359865475099,0.505524445014783,0.11418387971906,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0.347648640384553,0.255715457330331,0.41557608911912,0.162241263067758,0,0,0,0.210441855886474,0.260240885925407,0.229902104433473,0.180062129805349,1.9591626318643,0.408218994907967,0.512454881139399,1.21812241927647,4.13925393182425,0,0.189106080167819,0,0.219195732427575,0,0,0,0,0,0,0,0.414251545071004,0.703578179943289,0.720248245844059,0.23674473558521,0.590292695242212,2.00547246753592,1.86027155800326,0.268273401399619,0,0.16455984991348,0.32833492815819,0.162137619091711,0.877199924551994,1.09775057645525,0.268412837520744,0.210289948564127,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0.407302655690628,0,0,0,0,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0.167506257441816,0.238043640886014,0,0,0.44292937929755,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0.504941854408746,0,0.390438744296638,0.215423397732799,1.67278158566786,1.55959071857676,0.283076530788832,0,1.16902343164525,0.790575555893047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0,1.87737366450968,0.63549621259146,0.220528398054962,0.32977250588296,0,0,0.119372344003136,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.680191150845634,0,0,0.335769232728157,0,0.563047426353546,0,0,0,0,0,0,0.171853182343688,1.37016503954128,0.755393897389701,0,0.45032120322422,0.453142408984205,0,0.103787347584177,0.399024873401031,0,0,0,0,0.44449345560323,0,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0,0.476293691283074,0,0.38581844092741,0,1.61918812147837,0.685738504770831,1.24233064311536,0,0.436039249896986,0.752875043322645,0.0846146078916765,0,0,0,0,0.118635018124174,0,0.409231043169689,0,0,0.499621155875892,0,0.214871054048298,0.382576664137687,0,0|short_description=p@chr9:50564531..50564547,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=310 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:50564531..50564547,+ | |||
|description=CAGE_peak_at_chr9:50564531..50564547,+ | |||
|id=chr9:50564531..50564547,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.40e-09!50;CL:0000333!8.90e-08!10;CL:0000095!8.90e-08!10;CL:0000243!8.90e-08!10;CL:0000123!8.90e-08!10;CL:0000125!8.90e-08!10;CL:0000030!8.90e-08!10;CL:0000339!8.90e-08!10;CL:0000221!2.83e-07!44;CL:0000133!2.83e-07!44;CL:0002319!6.04e-07!43;CL:0002321!8.61e-07!70;CL:0000220!8.61e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,8.47e-20,10;CL:0000095,8.47e-20,10;CL:0000243,8.47e-20,10;CL:0000123,8.47e-20,10;CL:0000125,8.47e-20,10;CL:0000030,8.47e-20,10;CL:0000339,8.47e-20,10;CL:0002453,1.00e-14,8;CL:0000128,2.00e-14,6;CL:0000126,2.00e-14,6;CL:0000127,2.00e-14,6;CL:0002319,8.04e-10,43;CL:0000221,1.54e-09,44;CL:0000133,1.54e-09,44;CL:0002321,3.21e-08,70;CL:0002605,6.90e-08,2;CL:0002604,6.90e-08,2;CL:0000708,1.25e-07,2;CL:0000217,8.04e-07,2;CL:0000328,8.04e-07,2;CL:0002573,8.04e-07,2;CL:0002376,8.04e-07,2;CL:0000218,8.04e-07,2;CL:0000692,8.04e-07,2;CL:0002377,8.04e-07,2;CL:0002375,8.04e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.74e-11!23;UBERON:0001009!1.74e-11!23;UBERON:0007100!6.88e-10!18;UBERON:0000948!6.88e-10!18;UBERON:0005498!6.88e-10!18;UBERON:0004140!6.88e-10!18;UBERON:0009881!6.88e-10!18;UBERON:0004141!6.88e-10!18;UBERON:0003084!6.88e-10!18;UBERON:0007005!6.88e-10!18;UBERON:0004139!6.88e-10!18;UBERON:0004291!6.88e-10!18;UBERON:0004121!5.68e-09!102;UBERON:0000924!5.68e-09!102;UBERON:0006601!5.68e-09!102;UBERON:0004872!6.69e-08!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,1.25e-07,2;UBERON:0004121,4.79e-07,95;UBERON:0000924,4.79e-07,95;UBERON:0006601,4.79e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38486499773135,1.11514624341466,0.183546752161682,0,7.19483016055474,3.29529274101708,7.19390626574849,3.3596741190087,7.18762821824858,0,0,0,0.514518872071894,0.573066879877513,4.64104883049698,0,0,0,2.71075625655306,2.66788438833342,0,0,0,0.299600110518405,1.15265491596466,0,0.135005938331691,0,0,0.441737081903227,0,0,0,1.10115880999389,0.893811366596314,0.153606533256243,0,0.0914876436024097,0,1.3959149950069,0.56276261003168,0.30559649555362,0,0.284743361598206,0,1.74170244666323,1.058001841495,0.869593466105033,0,0,0,0,0.448026887097336,0.702222100658759,0,0.779358013808606,0,0.281686839553361,0,0,0,0,0.253359865475099,0.505524445014783,0.11418387971906,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0.347648640384553,0.255715457330331,0.41557608911912,0.162241263067758,0,0,0,0.210441855886474,0.260240885925407,0.229902104433473,0.180062129805349,1.9591626318643,0.408218994907967,0.512454881139399,1.21812241927647,4.13925393182425,0,0.189106080167819,0,0.219195732427575,0,0,0,0,0,0,0,0.414251545071004,0.703578179943289,0.720248245844059,0.23674473558521,0.590292695242212,2.00547246753592,1.86027155800326,0.268273401399619,0,0.16455984991348,0.32833492815819,0.162137619091711,0.877199924551994,1.09775057645525,0.268412837520744,0.210289948564127,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0.407302655690628,0,0,0,0,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0.167506257441816,0.238043640886014,0,0,0.44292937929755,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0.504941854408746,0,0.390438744296638,0.215423397732799,1.67278158566786,1.55959071857676,0.283076530788832,0,1.16902343164525,0.790575555893047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0,1.87737366450968,0.63549621259146,0.220528398054962,0.32977250588296,0,0,0.119372344003136,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0.680191150845634,0,0,0.335769232728157,0,0.563047426353546,0,0,0,0,0,0,0.171853182343688,1.37016503954128,0.755393897389701,0,0.45032120322422,0.453142408984205,0,0.103787347584177,0.399024873401031,0,0,0,0,0.44449345560323,0,0,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0,0.476293691283074,0,0.38581844092741,0,1.61918812147837,0.685738504770831,1.24233064311536,0,0.436039249896986,0.752875043322645,0.0846146078916765,0,0,0,0,0.118635018124174,0,0.409231043169689,0,0,0.499621155875892,0,0.214871054048298,0.382576664137687,0,0 | |||
|short_description=p@chr9:50564531..50564547,+ | |||
}} |
Latest revision as of 07:02, 5 August 2015
Short description: | p@chr9:50564531..50564547, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:50564531..50564547, + |
Coexpression cluster: | MCL_coexpression_mm9:310 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 8.47e-20 | 10 |
neuron associated cell | 8.47e-20 | 10 |
glial cell (sensu Vertebrata) | 8.47e-20 | 10 |
neuron associated cell (sensu Vertebrata) | 8.47e-20 | 10 |
glial cell | 8.47e-20 | 10 |
glioblast | 8.47e-20 | 10 |
glioblast (sensu Vertebrata) | 8.47e-20 | 10 |
oligodendrocyte precursor cell | 1.00e-14 | 8 |
oligodendrocyte | 2.00e-14 | 6 |
macroglial cell | 2.00e-14 | 6 |
astrocyte | 2.00e-14 | 6 |
neural cell | 8.04e-10 | 43 |
ectodermal cell | 1.54e-09 | 44 |
neurectodermal cell | 1.54e-09 | 44 |
embryonic cell | 3.21e-08 | 70 |
astrocyte of the cerebral cortex | 6.90e-08 | 2 |
astrocyte of the hippocampus | 6.90e-08 | 2 |
leptomeningeal cell | 1.25e-07 | 2 |
insulating cell | 8.04e-07 | 2 |
myelin accumulating cell | 8.04e-07 | 2 |
Schwann cell | 8.04e-07 | 2 |
non-myelinating Schwann cell | 8.04e-07 | 2 |
myelinating Schwann cell;;Schwann cell | 8.04e-07 | 2 |
terminal Schwann cell | 8.04e-07 | 2 |
immature Schwann cell | 8.04e-07 | 2 |
Schwann cell precursor | 8.04e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 1.25e-07 | 2 |
ectoderm-derived structure | 4.79e-07 | 95 |
ectoderm | 4.79e-07 | 95 |
presumptive ectoderm | 4.79e-07 | 95 |