FFCP PHASE1:Mm9::chr12:8018308..8018320,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=5 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:8018308..8018320,+ | |||
|description=CAGE_peak_at_chr12:8018308..8018320,+ | |description=CAGE_peak_at_chr12:8018308..8018320,+ | ||
|id=chr12:8018308..8018320,+ | |id=chr12:8018308..8018320,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.69e-21!22;UBERON:0007499!2.69e-21!22;UBERON:0006925!2.69e-21!22;UBERON:0009497!2.69e-21!22;UBERON:0000015!2.69e-21!22;UBERON:0002423!2.69e-21!22;UBERON:0006235!2.69e-21!22;UBERON:0008835!2.69e-21!22;UBERON:0003894!2.69e-21!22;UBERON:0004161!2.69e-21!22;UBERON:0008836!2.69e-21!22;UBERON:0009854!4.79e-20!23;UBERON:0009856!4.79e-20!23;UBERON:0002365!7.52e-18!25;UBERON:0002330!7.52e-18!25;UBERON:0004119!1.25e-14!130;UBERON:0000925!1.25e-14!130;UBERON:0006595!1.25e-14!130;UBERON:0001007!3.24e-14!128;UBERON:0001555!3.24e-14!128;UBERON:0007026!3.24e-14!128;UBERON:0004921!7.60e-13!126;UBERON:0004185!7.60e-13!126;UBERON:0000160!4.79e-11!43;UBERON:0005409!1.78e-10!59;UBERON:0005172!1.92e-09!49;UBERON:0005173!1.92e-09!49;UBERON:0002417!1.92e-09!49;UBERON:0000916!1.92e-09!49;UBERON:0005256!2.40e-09!47;UBERON:0003929!3.00e-08!55;UBERON:0000344!2.81e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.04e-23,22;UBERON:0007499,8.04e-23,22;UBERON:0006925,8.04e-23,22;UBERON:0009497,8.04e-23,22;UBERON:0000015,8.04e-23,22;UBERON:0002423,8.04e-23,22;UBERON:0006235,8.04e-23,22;UBERON:0008835,8.04e-23,22;UBERON:0003894,8.04e-23,22;UBERON:0004161,8.04e-23,22;UBERON:0008836,8.04e-23,22;UBERON:0009854,1.14e-21,23;UBERON:0009856,1.14e-21,23;UBERON:0002365,1.20e-19,25;UBERON:0002330,1.20e-19,25;UBERON:0004119,3.44e-17,118;UBERON:0000925,3.44e-17,118;UBERON:0006595,3.44e-17,118;UBERON:0001007,2.33e-16,116;UBERON:0001555,2.33e-16,116;UBERON:0007026,2.33e-16,116;UBERON:0000160,5.38e-16,31;UBERON:0004921,3.25e-14,114;UBERON:0003929,1.81e-10,55;UBERON:0005256,2.38e-09,45;UBERON:0005409,2.52e-09,47;UBERON:0003914,8.30e-09,47;UBERON:0005172,2.61e-08,49;UBERON:0005173,2.61e-08,49;UBERON:0002417,2.61e-08,49;UBERON:0000916,2.61e-08,49;UBERON:0000490,4.84e-08,66;UBERON:0005911,1.62e-07,69 | |||
|phase1_expression=0,1.39590163055744,2.27499619694768,0.60492842261366,1.00179145989269,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,4.81759490241057,2.29692785646008,0,0,0.950117097281869,0.756090389279792,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0.679971333707751,18.3499085156858,11.0461990966104,2.24013443548668,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.82694207550496,0,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.352766121407114,0,11.6181634835156,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96502539580558,1.58670339998127,0,0,0.38660238396628,0.403367049246685,1.55664630691409,0.380451252225118,5.69434873853414,7.41145296258049,4.77536896720512,1.59165177632921,2.53453313254856,4.49409704327111,8.42938394511308,4.58024928485045,0,0,0,0,0,0,0,0,0,0,5.03969466048153,0.333690211432188,0.393117990226406,1.12431056192427,0.608580364165509,0.241177159752417,2.03700681425136,1.15078454980324,6.48540907100142,15.1008777253445,271.7219103367,5.58211421502755,13.1055822708115,5.80931419278357,6.99649912735457,7.71909634181387,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27099242518292,0,0,0,0,0,0,5.82961673259701,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0.809186078308924,0.743881101528023,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0,0.367687016900028,0.666740183404846,0.206035057238894,0,0.252697211763798,0,0,0.187283014939765,0,0.0574354689556133,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0.354951612318675,0.476872379894642,0.436039249896986,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0.701794825336225,0,0,0,0 | |phase1_expression=0,1.39590163055744,2.27499619694768,0.60492842261366,1.00179145989269,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,4.81759490241057,2.29692785646008,0,0,0.950117097281869,0.756090389279792,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0.679971333707751,18.3499085156858,11.0461990966104,2.24013443548668,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.82694207550496,0,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.352766121407114,0,11.6181634835156,0,0,0,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96502539580558,1.58670339998127,0,0,0.38660238396628,0.403367049246685,1.55664630691409,0.380451252225118,5.69434873853414,7.41145296258049,4.77536896720512,1.59165177632921,2.53453313254856,4.49409704327111,8.42938394511308,4.58024928485045,0,0,0,0,0,0,0,0,0,0,5.03969466048153,0.333690211432188,0.393117990226406,1.12431056192427,0.608580364165509,0.241177159752417,2.03700681425136,1.15078454980324,6.48540907100142,15.1008777253445,271.7219103367,5.58211421502755,13.1055822708115,5.80931419278357,6.99649912735457,7.71909634181387,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27099242518292,0,0,0,0,0,0,5.82961673259701,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0.809186078308924,0.743881101528023,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0,0.367687016900028,0.666740183404846,0.206035057238894,0,0.252697211763798,0,0,0.187283014939765,0,0.0574354689556133,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0.354951612318675,0.476872379894642,0.436039249896986,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0.701794825336225,0,0,0,0 | ||
|short_description=p@chr12:8018308..8018320,+ | |short_description=p@chr12:8018308..8018320,+ | ||
}} | }} |
Latest revision as of 07:26, 5 August 2015
Short description: | p@chr12:8018308..8018320, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:8018308..8018320, + |
Coexpression cluster: | MCL_coexpression_mm9:5 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 8.04e-23 | 22 |
epithelial sac | 8.04e-23 | 22 |
digestive gland | 8.04e-23 | 22 |
epithelium of foregut-midgut junction | 8.04e-23 | 22 |
anatomical boundary | 8.04e-23 | 22 |
hepatobiliary system | 8.04e-23 | 22 |
foregut-midgut junction | 8.04e-23 | 22 |
hepatic diverticulum | 8.04e-23 | 22 |
liver primordium | 8.04e-23 | 22 |
septum transversum | 8.04e-23 | 22 |
liver bud | 8.04e-23 | 22 |
digestive tract diverticulum | 1.14e-21 | 23 |
sac | 1.14e-21 | 23 |
exocrine gland | 1.20e-19 | 25 |
exocrine system | 1.20e-19 | 25 |
endoderm-derived structure | 3.44e-17 | 118 |
endoderm | 3.44e-17 | 118 |
presumptive endoderm | 3.44e-17 | 118 |
digestive system | 2.33e-16 | 116 |
digestive tract | 2.33e-16 | 116 |
primitive gut | 2.33e-16 | 116 |
intestine | 5.38e-16 | 31 |
subdivision of digestive tract | 3.25e-14 | 114 |
gut epithelium | 1.81e-10 | 55 |
trunk mesenchyme | 2.38e-09 | 45 |
gastrointestinal system | 2.52e-09 | 47 |
epithelial tube | 8.30e-09 | 47 |
abdomen element | 2.61e-08 | 49 |
abdominal segment element | 2.61e-08 | 49 |
abdominal segment of trunk | 2.61e-08 | 49 |
abdomen | 2.61e-08 | 49 |
unilaminar epithelium | 4.84e-08 | 66 |
endo-epithelium | 1.62e-07 | 69 |