Personal tools

FFCP PHASE1:Mm9::chr2:60719328..60719343,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=56878|HGNC=|MCL_coexpression_id=3358|UniProt=E9PZ21,Q3TTX8,Q3UKR8,Q91W59,Q3TPK8|association_with_transcript=151bp_to_ENSMUST00000164147,NM_001141931,NM_001141932,uc008jur.2,uc008jus.2,uc008juv.1_5end|description=CAGE_peak_8_at_Rbms1_5end|id=chr2:60719328..60719343,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000222,6.31e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0005178,1.66e-07,17;UBERON:0005181,1.66e-07,17;UBERON:0002224,1.66e-07,17;UBERON:0000915,1.66e-07,17;UBERON:0008947,1.66e-07,17;UBERON:0003258,1.66e-07,17|phase1_expression=0.480446541314382,0.348975407639361,0,0,0,0.839396359559449,0,0.387369970324729,0,0,0,0.0797721589953364,0.342401459862411,0.699363219351979,0.999329285446988,0,0.699561878128147,0.473193248037357,0.274228867211478,0.84877930359606,0.935476191661768,0.397163804803541,0.783599367416806,0.159992422793407,0.22940928106717,0.57423196411502,0.430761996159075,0.215471232685889,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0,1.25559489221072,0.7813353445238,2.09409497589519,1.17646297606203,0.683045484958446,1.45653105909346,2.39203954153597,2.73717714292689,1.65192076945513,6.25913075478431,0.218025156380447,0.878744730937887,1.94429899074283,0.55994568650145,0,0.671130424230945,4.35217285206807,0.672187598284928,2.05807548828758,2.86533439938757,3.6097046459421,0.606949382578793,0.528990979272033,0,2.71075625655306,2.66788438833342,1.3498495759221,0.988866362566974,2.1314403448383,0.299600110518405,0,0,0,0,0.571301968807607,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0,0.153606533256243,0.263772575460388,0.274462930807229,0.52091337055676,0.558365998002762,0.56276261003168,0.15279824777681,0,0.427115042397309,0,2.57469057332826,1.88928900266964,1.44932244350839,0,0.679971333707751,0,0,0,0.280888840263504,1.53387290320252,1.03914401841148,0.70667914902068,0.563373679106722,0,7.64415719119937,7.11066703153331,1.29894624606728,1.52015919285059,1.01104889002957,0.5709193985953,2.33044095282455,0.445326417194474,0.520455980298408,0.304465478312141,0.922461989024234,0.753613202763113,0.940709657085638,0.251333182659351,4.44950941921873,0.86759614151947,0.884610551949874,0.485300549842228,0.883366073841574,0,0,0,0,0,0.958520996047362,0,0.889491589511453,0.149790639404823,0,0.125654352112864,0.347648640384553,0,0.83115217823824,0.324482526135515,1.12023300235348,0.497627882440372,0.505445516867349,0.631325567659422,0.650602214813519,0,0.180062129805349,0.30140963567143,0.544291993210623,0.384341160854549,0.281105173679186,0,0.646703978798527,0.945530400839096,1.05570674498369,0.876782929710299,0.278047249225598,3.48252166522167,2.88094990971121,0.398068533636986,0,1.02939162845886,0,0.621377317606506,0.703578179943289,0.36012412292203,0,0.393528463494808,0.771335564436891,0.697601834251224,1.3413670069981,0.583826711835847,0.493679549740441,0.164167464079095,0.648550476366846,0,0.878200461164203,0.671032093801859,0,0.102904612379284,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.80673409849337,0.22237804384487,0.380451252225118,0,0.658795818896044,0.754005626400808,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0.569003702859245,0.799739588268102,1.1270773567308,0.814605311381257,0.581857461502877,0.911765658574141,0.69560190836683,0.442830443938806,0.31399745568275,0.370191491765402,0.296452627087149,1.16791574001266,0.982794975566015,0.224862112384854,1.01430060694251,0.482354319504834,0.50925170356284,0.575392274901621,1.13494658742525,0,1.43768206527355,0.372140947668503,0.624075346229121,0.505157755894224,0.179397413521912,0,2.21703828199926,0.568474235311454,0.488894929326078,0.678980343100753,0.469380496577004,3.35012514883632,5.71304738126433,5.65887578787617,1.89162172927429,2.6575762757853,2.39182152986231,2.13022309130459,2.07221978239075,2.16973587872267,0,3.80733978673097,0,0.275936746304732,0.321101179975584,0.117211686592203,0.491804836130026,0.757412781613119,0.94652465824877,1.95219372148319,1.72338718186239,0.238968797952552,1.11399337041197,1.13230612315533,0.809621403349789,1.46127928955656,3.16230222357219,0,0.851640511249612,0.35613120733451,1.30309567482861,1.48473110675282,0,0.485561272309963,0,0.565815239267694,0,0.307435147943927,0.775284879504663,0.363533729477506,0,0,0,1.03135543248187,1.02131881726136,0.720244376125241,0.646793418913773,0.428674070063185,0.532020700926821,0.535106452806212,0.822745103010605,0.608929898229199,10.0908834467395,5.50763384245932,0.220528398054962,1.6488625294148,4.68246837418126,1.62844897306021,0.954978752025092,1.64140899745061,0.291480836629851,0,0.341741761595705,0.412773735926445,0.740778109478847,0.753473828018764,0.546776910884101,0.228778173206523,0.509935289981566,0.419854356970974,0.276399947608848,1.90934123603023,1.10717597753397,1.21991680276109,1.29606408986162,2.09088296014469,2.83871332870031,2.42755823492677,0.661227645802687,0.523511883968059,0.388844919875379,0,0,0.448549638131936,0.165458490457098,0.194451188344048,0.387479470433193,0.337912250981556,0.704143431874524,0.2604087696879,0.314578033277133,0.241584120826006,0,0.632022241256357,1.21635129174099,1.02710957164827,0.77952493786677,2.50637373934474,0.79472541912506,0.360586348559907,1.03382669022204,0.807731599585181,0.762068066549998,0.403304740547362,0.877120926657772,0.673482891482306,0.467507608726276,3.40095575422817,5.54964883435162,3.40912655116008,3.52557694364565,0.579568782096571,5.06742683718191,0.36630324853453,2.57242054894879,1.00314420807073,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.518936737920883,1.19707462020309,0.853668028770671,0.972426868273176,0.838452650511929,1.10306105070008,1.11123363900808,0.824140228955577,0.64183841918363,1.01078884705519,0.760437899670719,0.754505365544305,0.749132059759059,0.832326981263301,1.14870937911227,0.952587382566147,1.73826488917283,0.964546102318525,0.412085900803307,0.294397840268795,1.02860775715625,1.06485483695602,0.953744759789284,1.0174249164263,1.2234219453993,1.01537529470012,0.73171189149109,0.526139422875686,0.814824683075171,1.12228454331548,0.830445126869219,1.28055827088233,1.22769312950907,1.08455788830176,1.92906610981141,0.999242311751784,1.63752125911786,1.28922632428979,1.91288332068843,0.882365676478062,1.15933917810211|short_description=p8@Rbms1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:56878
|HGNC=
|MCL_coexpression_id=3358
|TSSclassifier=NA
|UniProt=uniprot:E9PZ21,uniprot:Q3TTX8,uniprot:Q3UKR8,uniprot:Q91W59,uniprot:Q3TPK8
|association_with_transcript=151bp_to_ENSMUST00000164147,NM_001141931,NM_001141932,uc008jur.2,uc008jus.2,uc008juv.1_5end
|cluster_id=chr2:60719328..60719343,-
|description=CAGE_peak_8_at_Rbms1_5end
|id=chr2:60719328..60719343,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000222,6.31e-07,7
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0005178,1.66e-07,17;UBERON:0005181,1.66e-07,17;UBERON:0002224,1.66e-07,17;UBERON:0000915,1.66e-07,17;UBERON:0008947,1.66e-07,17;UBERON:0003258,1.66e-07,17
|phase1_expression=0.480446541314382,0.348975407639361,0,0,0,0.839396359559449,0,0.387369970324729,0,0,0,0.0797721589953364,0.342401459862411,0.699363219351979,0.999329285446988,0,0.699561878128147,0.473193248037357,0.274228867211478,0.84877930359606,0.935476191661768,0.397163804803541,0.783599367416806,0.159992422793407,0.22940928106717,0.57423196411502,0.430761996159075,0.215471232685889,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0,1.25559489221072,0.7813353445238,2.09409497589519,1.17646297606203,0.683045484958446,1.45653105909346,2.39203954153597,2.73717714292689,1.65192076945513,6.25913075478431,0.218025156380447,0.878744730937887,1.94429899074283,0.55994568650145,0,0.671130424230945,4.35217285206807,0.672187598284928,2.05807548828758,2.86533439938757,3.6097046459421,0.606949382578793,0.528990979272033,0,2.71075625655306,2.66788438833342,1.3498495759221,0.988866362566974,2.1314403448383,0.299600110518405,0,0,0,0,0.571301968807607,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0,0.153606533256243,0.263772575460388,0.274462930807229,0.52091337055676,0.558365998002762,0.56276261003168,0.15279824777681,0,0.427115042397309,0,2.57469057332826,1.88928900266964,1.44932244350839,0,0.679971333707751,0,0,0,0.280888840263504,1.53387290320252,1.03914401841148,0.70667914902068,0.563373679106722,0,7.64415719119937,7.11066703153331,1.29894624606728,1.52015919285059,1.01104889002957,0.5709193985953,2.33044095282455,0.445326417194474,0.520455980298408,0.304465478312141,0.922461989024234,0.753613202763113,0.940709657085638,0.251333182659351,4.44950941921873,0.86759614151947,0.884610551949874,0.485300549842228,0.883366073841574,0,0,0,0,0,0.958520996047362,0,0.889491589511453,0.149790639404823,0,0.125654352112864,0.347648640384553,0,0.83115217823824,0.324482526135515,1.12023300235348,0.497627882440372,0.505445516867349,0.631325567659422,0.650602214813519,0,0.180062129805349,0.30140963567143,0.544291993210623,0.384341160854549,0.281105173679186,0,0.646703978798527,0.945530400839096,1.05570674498369,0.876782929710299,0.278047249225598,3.48252166522167,2.88094990971121,0.398068533636986,0,1.02939162845886,0,0.621377317606506,0.703578179943289,0.36012412292203,0,0.393528463494808,0.771335564436891,0.697601834251224,1.3413670069981,0.583826711835847,0.493679549740441,0.164167464079095,0.648550476366846,0,0.878200461164203,0.671032093801859,0,0.102904612379284,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.80673409849337,0.22237804384487,0.380451252225118,0,0.658795818896044,0.754005626400808,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0.569003702859245,0.799739588268102,1.1270773567308,0.814605311381257,0.581857461502877,0.911765658574141,0.69560190836683,0.442830443938806,0.31399745568275,0.370191491765402,0.296452627087149,1.16791574001266,0.982794975566015,0.224862112384854,1.01430060694251,0.482354319504834,0.50925170356284,0.575392274901621,1.13494658742525,0,1.43768206527355,0.372140947668503,0.624075346229121,0.505157755894224,0.179397413521912,0,2.21703828199926,0.568474235311454,0.488894929326078,0.678980343100753,0.469380496577004,3.35012514883632,5.71304738126433,5.65887578787617,1.89162172927429,2.6575762757853,2.39182152986231,2.13022309130459,2.07221978239075,2.16973587872267,0,3.80733978673097,0,0.275936746304732,0.321101179975584,0.117211686592203,0.491804836130026,0.757412781613119,0.94652465824877,1.95219372148319,1.72338718186239,0.238968797952552,1.11399337041197,1.13230612315533,0.809621403349789,1.46127928955656,3.16230222357219,0,0.851640511249612,0.35613120733451,1.30309567482861,1.48473110675282,0,0.485561272309963,0,0.565815239267694,0,0.307435147943927,0.775284879504663,0.363533729477506,0,0,0,1.03135543248187,1.02131881726136,0.720244376125241,0.646793418913773,0.428674070063185,0.532020700926821,0.535106452806212,0.822745103010605,0.608929898229199,10.0908834467395,5.50763384245932,0.220528398054962,1.6488625294148,4.68246837418126,1.62844897306021,0.954978752025092,1.64140899745061,0.291480836629851,0,0.341741761595705,0.412773735926445,0.740778109478847,0.753473828018764,0.546776910884101,0.228778173206523,0.509935289981566,0.419854356970974,0.276399947608848,1.90934123603023,1.10717597753397,1.21991680276109,1.29606408986162,2.09088296014469,2.83871332870031,2.42755823492677,0.661227645802687,0.523511883968059,0.388844919875379,0,0,0.448549638131936,0.165458490457098,0.194451188344048,0.387479470433193,0.337912250981556,0.704143431874524,0.2604087696879,0.314578033277133,0.241584120826006,0,0.632022241256357,1.21635129174099,1.02710957164827,0.77952493786677,2.50637373934474,0.79472541912506,0.360586348559907,1.03382669022204,0.807731599585181,0.762068066549998,0.403304740547362,0.877120926657772,0.673482891482306,0.467507608726276,3.40095575422817,5.54964883435162,3.40912655116008,3.52557694364565,0.579568782096571,5.06742683718191,0.36630324853453,2.57242054894879,1.00314420807073,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.518936737920883,1.19707462020309,0.853668028770671,0.972426868273176,0.838452650511929,1.10306105070008,1.11123363900808,0.824140228955577,0.64183841918363,1.01078884705519,0.760437899670719,0.754505365544305,0.749132059759059,0.832326981263301,1.14870937911227,0.952587382566147,1.73826488917283,0.964546102318525,0.412085900803307,0.294397840268795,1.02860775715625,1.06485483695602,0.953744759789284,1.0174249164263,1.2234219453993,1.01537529470012,0.73171189149109,0.526139422875686,0.814824683075171,1.12228454331548,0.830445126869219,1.28055827088233,1.22769312950907,1.08455788830176,1.92906610981141,0.999242311751784,1.63752125911786,1.28922632428979,1.91288332068843,0.882365676478062,1.15933917810211
|short_description=p8@Rbms1
}}

Revision as of 07:28, 5 August 2015

Short description:p8@Rbms1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Rbms1_5end
Coexpression cluster:MCL_coexpression_mm9:3358
Association with transcript: 151bp_to_ENSMUST00000164147, NM_001141931, NM_001141932, uc008jur.2, uc008jus.2, uc008juv.1_5end
EntrezGene:56878
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p8@Rbms1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.70
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.74
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D92.57
Mouse Schwann, donor2.CNhs12573.11746-123F91.89
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H92.33
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A84.45
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.96
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D50.70
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A63.35
lung, embryo E18.CNhs10583.1287-20I65.71
lung, neonate N00.CNhs11224.640-42C65.66
lung, neonate N06.CNhs11212.683-20E51.89
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E62.39
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H22.17
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I710.09
placenta, adult pregnant day17.CNhs10464.577-18G35.51
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C31.65
skin, neonate N00.CNhs11124.650-25G44.68
skin, neonate N03.CNhs11215.662-22H31.63
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C62.84
stomach, neonate N03.CNhs11193.1340-24B82.43
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C12.51
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.67
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B43.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.41
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.53
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F55.07
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D52.57
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mesodermal cell6.31e-077

Uber anatomy
Ontology termp-valuen
thoracic cavity element1.66e-0717
thoracic segment organ1.66e-0717
thoracic cavity1.66e-0717
thoracic segment of trunk1.66e-0717
respiratory primordium1.66e-0717
endoderm of foregut1.66e-0717
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:60719328..60719343,-&oldid=3873960"