FFCP PHASE1:Mm9::chr6:135312399..135312415,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=489|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:135312399..135312415,+|id=chr6:135312399..135312415,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,1.65e-08,6;CL:0000677,1.65e-08,6;CL:0000584,1.65e-08,6;CL:0000075,2.64e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!5.44e-19!43;UBERON:0005409!4.06e-17!59;UBERON:0000344!9.96e-10!15;UBERON:0001242!9.68e-08!13;UBERON:0000060!9.68e-08!13;UBERON:0001262!9.68e-08!13;UBERON:0004786!9.68e-08!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.84e-52,31;UBERON:0005409,4.84e-36,47;UBERON:0001007,3.80e-13,116;UBERON:0001555,3.80e-13,116;UBERON:0007026,3.80e-13,116;UBERON:0004119,7.63e-13,118;UBERON:0000925,7.63e-13,118;UBERON:0006595,7.63e-13,118;UBERON:0000344,1.32e-12,15;UBERON:0004921,3.40e-12,114;UBERON:0001242,1.71e-11,13;UBERON:0001262,1.71e-11,13;UBERON:0004786,1.71e-11,13;UBERON:0002108,5.72e-08,4;UBERON:0001155,8.59e-08,2;UBERON:0000059,8.59e-08,2;UBERON:0004923,1.97e-07,24|phase1_expression=0,1.74487703819681,3.18499467572675,3.93203474698879,3.00537437967808,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27993938234725,0.91763712426868,4.01962374880514,0,0.646413698057667,3.99049180858385,4.53654233567875,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0.35333957451034,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1835056730873,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.94753809370836,4.23120906661671,0,0,1.03093969057675,4.03367049246685,3.7804267453628,7.03834816616469,4.2707615539006,4.6115707322723,1.75934646160189,2.18852119245266,1.75467678407208,4.49409704327111,4.32276099749388,5.57595565112228,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604647113929502,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0.209088296014469,0.436725127492355,0,0,0,3.36998930558661,0,0,0,0.165458490457098,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.551530525350042,0.222246727801615,0.618105171716683,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0.256100609619477,0.0574354689556133,0.476293691283074,0.347652977834566,0.192909220463705,0.824171801606613,0.294397840268795,0.342869252385415,0,0.238436189947321,0.436039249896986,0.188218760830661,0.338458431566706,0,0.526139422875686,0.407412341537585,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.77468420592983,0.578719832943424,0,0,0,0,0,0|short_description=p@chr6:135312399..135312415,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=489 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:135312399..135312415,+ | |||
|description=CAGE_peak_at_chr6:135312399..135312415,+ | |||
|id=chr6:135312399..135312415,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.65e-08,6;CL:0000677,1.65e-08,6;CL:0000584,1.65e-08,6;CL:0000075,2.64e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.44e-19!43;UBERON:0005409!4.06e-17!59;UBERON:0000344!9.96e-10!15;UBERON:0001242!9.68e-08!13;UBERON:0000060!9.68e-08!13;UBERON:0001262!9.68e-08!13;UBERON:0004786!9.68e-08!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.84e-52,31;UBERON:0005409,4.84e-36,47;UBERON:0001007,3.80e-13,116;UBERON:0001555,3.80e-13,116;UBERON:0007026,3.80e-13,116;UBERON:0004119,7.63e-13,118;UBERON:0000925,7.63e-13,118;UBERON:0006595,7.63e-13,118;UBERON:0000344,1.32e-12,15;UBERON:0004921,3.40e-12,114;UBERON:0001242,1.71e-11,13;UBERON:0001262,1.71e-11,13;UBERON:0004786,1.71e-11,13;UBERON:0002108,5.72e-08,4;UBERON:0001155,8.59e-08,2;UBERON:0000059,8.59e-08,2;UBERON:0004923,1.97e-07,24 | |||
|phase1_expression=0,1.74487703819681,3.18499467572675,3.93203474698879,3.00537437967808,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27993938234725,0.91763712426868,4.01962374880514,0,0.646413698057667,3.99049180858385,4.53654233567875,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0.35333957451034,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1835056730873,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.94753809370836,4.23120906661671,0,0,1.03093969057675,4.03367049246685,3.7804267453628,7.03834816616469,4.2707615539006,4.6115707322723,1.75934646160189,2.18852119245266,1.75467678407208,4.49409704327111,4.32276099749388,5.57595565112228,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604647113929502,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0.209088296014469,0.436725127492355,0,0,0,3.36998930558661,0,0,0,0.165458490457098,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.551530525350042,0.222246727801615,0.618105171716683,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0.256100609619477,0.0574354689556133,0.476293691283074,0.347652977834566,0.192909220463705,0.824171801606613,0.294397840268795,0.342869252385415,0,0.238436189947321,0.436039249896986,0.188218760830661,0.338458431566706,0,0.526139422875686,0.407412341537585,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.77468420592983,0.578719832943424,0,0,0,0,0,0 | |||
|short_description=p@chr6:135312399..135312415,+ | |||
}} |
Latest revision as of 07:41, 5 August 2015
Short description: | p@chr6:135312399..135312415, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:135312399..135312415, + |
Coexpression cluster: | MCL_coexpression_mm9:489 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.65e-08 | 6 |
gut absorptive cell | 1.65e-08 | 6 |
enterocyte | 1.65e-08 | 6 |
columnar/cuboidal epithelial cell | 2.64e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.84e-52 | 31 |
gastrointestinal system | 4.84e-36 | 47 |
digestive system | 3.80e-13 | 116 |
digestive tract | 3.80e-13 | 116 |
primitive gut | 3.80e-13 | 116 |
endoderm-derived structure | 7.63e-13 | 118 |
endoderm | 7.63e-13 | 118 |
presumptive endoderm | 7.63e-13 | 118 |
mucosa | 1.32e-12 | 15 |
subdivision of digestive tract | 3.40e-12 | 114 |
intestinal mucosa | 1.71e-11 | 13 |
wall of intestine | 1.71e-11 | 13 |
gastrointestinal system mucosa | 1.71e-11 | 13 |
small intestine | 5.72e-08 | 4 |
colon | 8.59e-08 | 2 |
large intestine | 8.59e-08 | 2 |
organ component layer | 1.97e-07 | 24 |