FFCP PHASE1:Mm9::chr2:68259263..68259293,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=191 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:68259263..68259293,+ | |||
|description=CAGE_peak_at_chr2:68259263..68259293,+ | |description=CAGE_peak_at_chr2:68259263..68259293,+ | ||
|id=chr2:68259263..68259293,+ | |id=chr2:68259263..68259293,+ | ||
|ontology_enrichment_celltype=CL:0000239!1.08e-07!6;CL:0000677!1.08e-07!6;CL:0000212!1.08e-07!6;CL:0000584!1.08e-07!6;CL:0002563!1.50e-07!9;CL:0002251!1.50e-07!9 | |ontology_enrichment_celltype=CL:0000239!1.08e-07!6;CL:0000677!1.08e-07!6;CL:0000212!1.08e-07!6;CL:0000584!1.08e-07!6;CL:0002563!1.50e-07!9;CL:0002251!1.50e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.53e-19,6;CL:0000677,5.53e-19,6;CL:0000584,5.53e-19,6;CL:0000075,3.40e-16,7;CL:0002563,1.80e-12,9;CL:0002251,1.80e-12,9;CL:0000682,2.91e-10,3;CL:0000066,5.11e-09,25;CL:0002076,3.04e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.22e-14!43;UBERON:0005409!5.53e-12!59;UBERON:0000344!3.76e-11!15;UBERON:0001242!5.96e-09!13;UBERON:0000060!5.96e-09!13;UBERON:0001262!5.96e-09!13;UBERON:0004786!5.96e-09!13;UBERON:0004923!2.84e-08!24;UBERON:0003350!1.50e-07!9;UBERON:0004808!1.50e-07!9;UBERON:0001277!1.50e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.59e-42,31;UBERON:0005409,5.91e-29,47;UBERON:0000344,2.73e-20,15;UBERON:0001242,1.08e-14,13;UBERON:0001262,1.08e-14,13;UBERON:0004786,1.08e-14,13;UBERON:0003350,1.80e-12,9;UBERON:0004808,1.80e-12,9;UBERON:0001277,1.80e-12,9;UBERON:0004923,5.27e-12,24;UBERON:0001007,1.04e-11,116;UBERON:0001555,1.04e-11,116;UBERON:0007026,1.04e-11,116;UBERON:0004119,1.98e-11,118;UBERON:0000925,1.98e-11,118;UBERON:0006595,1.98e-11,118;UBERON:0000485,4.26e-10,11;UBERON:0004921,2.08e-09,114;UBERON:0001962,2.68e-08,2;UBERON:0001961,2.68e-08,2;UBERON:0001744,2.68e-08,2 | |||
|phase1_expression=0,8.02643437570531,9.09998478779072,1.51232105653415,3.50627010962443,2.85394762250213,4.20502753071946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.6392119705143,14.9116032693661,3.44539178469012,3.01533397311352,7.97243560937789,0,0.252030129759931,1.99557459589774,0,0,0,0,0.498703936075477,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0,0,0,0,0.150722640552623,0,0.125666591329675,0.494389935468748,0,0,0,0,0,0,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0.56748166682099,0.292399974850665,0,0.134206418760372,0,0,5.28670052774077,3.17340679996253,0.213288250535234,0,0.128867461322093,1.61346819698674,5.55945109612176,6.65789691393957,1.42358718463353,6.58795818896044,6.28338022000674,8.75408476981064,6.43381487493096,3.59527763461689,2.16138049874694,0.597423819763102,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,4.39328098385976,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.886701168211368,0,0.329098041204242,0.304464949114599,0,0.21183207086382,0.882113592219848,0,0,0,0,0,5.24665505933731,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0.655087691238533,0.134864346384821,0.165306911450672,0,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0.129920822977795,0.358053391334963,0.39736270956253,0.600977247599844,0,0.302899349844443,0.0762068066549998,0.302478555410522,0.38983152295901,0.192423683280659,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0.412070114477788,0.64183841918363,0.505394423527595,0.50695859978048,0.188626341386076,0.468207537349412,0.256100609619477,0.516919220600519,0.476293691283074,0.231768651889711,0.192909220463705,0,0.294397840268795,0.342869252385415,0.354951612318675,0.476872379894642,0.290692833264657,0,0.338458431566706,0.365855945745545,0,0.407412341537585,0.561142271657738,0.355905054372522,0.394017929502254,0,0.309873682371932,0.192906610981141,0,0.233931608445408,0.859484216193193,0,0,0 | |phase1_expression=0,8.02643437570531,9.09998478779072,1.51232105653415,3.50627010962443,2.85394762250213,4.20502753071946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.6392119705143,14.9116032693661,3.44539178469012,3.01533397311352,7.97243560937789,0,0.252030129759931,1.99557459589774,0,0,0,0,0.498703936075477,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0,0,0,0,0.150722640552623,0,0.125666591329675,0.494389935468748,0,0,0,0,0,0,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0.56748166682099,0.292399974850665,0,0.134206418760372,0,0,5.28670052774077,3.17340679996253,0.213288250535234,0,0.128867461322093,1.61346819698674,5.55945109612176,6.65789691393957,1.42358718463353,6.58795818896044,6.28338022000674,8.75408476981064,6.43381487493096,3.59527763461689,2.16138049874694,0.597423819763102,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,4.39328098385976,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.886701168211368,0,0.329098041204242,0.304464949114599,0,0.21183207086382,0.882113592219848,0,0,0,0,0,5.24665505933731,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0.655087691238533,0.134864346384821,0.165306911450672,0,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0.129920822977795,0.358053391334963,0.39736270956253,0.600977247599844,0,0.302899349844443,0.0762068066549998,0.302478555410522,0.38983152295901,0.192423683280659,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0.412070114477788,0.64183841918363,0.505394423527595,0.50695859978048,0.188626341386076,0.468207537349412,0.256100609619477,0.516919220600519,0.476293691283074,0.231768651889711,0.192909220463705,0,0.294397840268795,0.342869252385415,0.354951612318675,0.476872379894642,0.290692833264657,0,0.338458431566706,0.365855945745545,0,0.407412341537585,0.561142271657738,0.355905054372522,0.394017929502254,0,0.309873682371932,0.192906610981141,0,0.233931608445408,0.859484216193193,0,0,0 | ||
|short_description=p@chr2:68259263..68259293,+ | |short_description=p@chr2:68259263..68259293,+ | ||
}} | }} |
Latest revision as of 08:54, 5 August 2015
Short description: | p@chr2:68259263..68259293, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:68259263..68259293, + |
Coexpression cluster: | MCL_coexpression_mm9:191 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.53e-19 | 6 |
gut absorptive cell | 5.53e-19 | 6 |
enterocyte | 5.53e-19 | 6 |
columnar/cuboidal epithelial cell | 3.40e-16 | 7 |
intestinal epithelial cell | 1.80e-12 | 9 |
epithelial cell of alimentary canal | 1.80e-12 | 9 |
M cell of gut | 2.91e-10 | 3 |
epithelial cell | 5.11e-09 | 25 |
endo-epithelial cell | 3.04e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.59e-42 | 31 |
gastrointestinal system | 5.91e-29 | 47 |
mucosa | 2.73e-20 | 15 |
intestinal mucosa | 1.08e-14 | 13 |
wall of intestine | 1.08e-14 | 13 |
gastrointestinal system mucosa | 1.08e-14 | 13 |
epithelium of mucosa | 1.80e-12 | 9 |
gastrointestinal system epithelium | 1.80e-12 | 9 |
intestinal epithelium | 1.80e-12 | 9 |
organ component layer | 5.27e-12 | 24 |
digestive system | 1.04e-11 | 116 |
digestive tract | 1.04e-11 | 116 |
primitive gut | 1.04e-11 | 116 |
endoderm-derived structure | 1.98e-11 | 118 |
endoderm | 1.98e-11 | 118 |
presumptive endoderm | 1.98e-11 | 118 |
simple columnar epithelium | 4.26e-10 | 11 |
subdivision of digestive tract | 2.08e-09 | 114 |
gut-associated lymphoid tissue | 2.68e-08 | 2 |
mucosa-associated lymphoid tissue | 2.68e-08 | 2 |
lymphoid tissue | 2.68e-08 | 2 |