FFCP PHASE1:Mm9::chr2:68699490..68699567,+: Difference between revisions
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{{FFCP|EntrezGene=241447|HGNC=|MCL_coexpression_id=163|UniProt=Q8C172|association_with_transcript=0bp_to_ENSMUST00000028426,ENSMUST00000141983_5end|description=CAGE_peak_1_at_Lass6_5end|id=chr2:68699490..68699567,+|ontology_enrichment_celltype=CL:0002563!4.18e-07!9;CL:0002251!4.18e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,4.18e-07,9;CL:0002251,4.18e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.01e-15!43;UBERON:0000344!1.72e-10!15;UBERON:0005409!6.15e-10!59;UBERON:0001242!2.05e-09!13;UBERON:0000060!2.05e-09!13;UBERON:0001262!2.05e-09!13;UBERON:0004786!2.05e-09!13;UBERON:0003350!4.18e-07!9;UBERON:0004808!4.18e-07!9;UBERON:0001277!4.18e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.30e-16,31;UBERON:0000344,1.72e-10,15;UBERON:0001242,2.05e-09,13;UBERON:0001262,2.05e-09,13;UBERON:0004786,2.05e-09,13;UBERON:0005409,3.39e-09,47;UBERON:0003350,4.18e-07,9;UBERON:0004808,4.18e-07,9;UBERON:0001277,4.18e-07,9|phase1_expression=22.1005409004616,188.446720125255,199.744666092006,302.766675518137,314.06162267636,135.310693160983,110.265166361088,8.13476937681931,12.8117737158017,15.6823232635736,13.3550015215894,10.0512920334124,12.497653284978,11.4520727168887,6.99530499812892,4.85940641735582,4.19737126876888,14.1957974411207,13.5743289269681,12.3072999021429,28.5745454907594,66.7235192069949,89.5915276746548,96.4754309444242,106.904724977301,140.112599244065,144.30526871329,117.647293046495,141.947494333911,121.226492414527,93.3485449858833,0,0,0,155.979874665688,84.9459037781896,134.139267064376,180.805664478344,131.264337879998,115.175223674236,295.8804384796,280.048648832963,193.233120506399,33.4885535815036,32.1364871965861,42.3992997493484,5.47673941043627,4.57852828398938,5.27246838562732,14.5822424305713,10.0790223570261,4.31257693094915,4.36234775750115,15.9579671242496,7.05796978199174,64.0575995729508,94.269501739851,51.5672092277442,47.9490012237247,53.4280889064753,45.0020296489387,9.82649143000483,6.22506357277798,20.2477436388315,20.7661936139065,28.419204597844,7.78960287347852,7.68436610643109,48.3193593357506,42.9318883894776,41.6443423475736,15.996455126613,17.8903518170807,47.4039392961872,40.0634068856228,39.5264078242309,31.9336054898227,25.9205296312931,24.577045320999,51.699424790236,52.6053950713856,44.7985498678814,22.0554569211091,27.0126052815206,29.4900618209243,35.6500588423138,36.3047786037712,44.7358669980721,37.5601918932593,35.2163470097621,30.1459068249745,12.9063581547208,48.2779646932503,9.17495425784289,27.9403859502498,28.2256938871321,25.1395512035836,37.1538103220166,21.5622383820381,22.2603931941514,20.4222958676187,50.047326191584,68.7974147207943,56.8853362522665,5.19578498426914,6.33399663687746,7.07734223020697,44.4175292107143,50.2339494275513,4.60170631100957,18.0424739836781,12.1786191324856,11.992005857315,9.64624899536784,15.7568867561844,3.64433114856059,37.3264401278905,14.749134405831,71.6534547079398,12.2942805960031,15.6797478106879,15.5160081003271,80.1484573237925,72.9024184558752,77.0763881073515,110.357447850111,11.5022519525683,16.197373736822,17.0274104277907,28.1606402081067,34.7700458142156,43.7277145352768,51.7996474172984,36.3115949409069,23.6878370797899,29.5279098783319,32.0793996128496,34.9583587414361,96.0346482047964,10.3116509384372,19.1277051155174,20.0014830857121,23.0479526150847,24.5648853072216,27.2826361596825,26.9038812598185,23.6128345890517,14.2286853906459,23.7124792226126,34.7955187508787,32.7269090944945,21.2619860454748,32.531528159395,23.3328951569852,20.7839957772023,35.6271337605103,30.8973802417823,33.7125758320277,36.941254921427,29.8261112451123,28.3776532577126,22.6878197440879,35.985199808952,27.7437566763839,31.1619568032504,30.4619467623034,27.0956135413615,26.9727940868162,19.4180622897907,11.4917224855367,10.2957388123237,9.5029991826466,11.6361561104257,9.66286215074677,54.465096678109,45.7925525087816,127.87206901473,97.5822590988478,29.6470668243975,32.280897388601,54.1243337552792,80.8750933739604,88.0617053625686,94.5421361779419,98.2275157397139,63.4090975687442,62.0797965736666,58.2942463080572,73.6964249310274,96.1736767260017,119.092065480957,125.85728469676,18.587454293402,35.0742933711867,41.7018621990398,38.0827983070738,39.5663073821957,33.8756010070239,34.400676195596,36.9025369949005,38.1506908654541,32.8236456031989,34.3885047421093,11.0117769772622,14.3488066432638,18.2138311031732,23.7346342024548,33.5236252055859,41.24938798859,52.9360892909492,30.8056930872567,30.7508782770651,46.0058260887535,43.1683499295464,35.8843324081745,38.8971472038552,32.4709318474661,20.2626278972614,43.0474933088189,28.6132031773432,26.5632911600502,28.3474293244564,22.9996443322732,33.5012514883632,33.0880660831559,31.6116509529634,46.9752729436449,50.9368786192182,44.0095161494664,37.524699069904,38.5087509560947,30.0870041849544,58.8086007363162,90.2883435139058,2.45882136509518,7.17435540392304,16.8578119487182,15.589154316763,27.70500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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:241447 | |||
|HGNC= | |||
|MCL_coexpression_id=163 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8C172 | |||
|association_with_transcript=0bp_to_ENSMUST00000028426,ENSMUST00000141983_5end | |||
|cluster_id=chr2:68699490..68699567,+ | |||
|description=CAGE_peak_1_at_Lass6_5end | |||
|id=chr2:68699490..68699567,+ | |||
|ontology_enrichment_celltype=CL:0002563!4.18e-07!9;CL:0002251!4.18e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.18e-07,9;CL:0002251,4.18e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.01e-15!43;UBERON:0000344!1.72e-10!15;UBERON:0005409!6.15e-10!59;UBERON:0001242!2.05e-09!13;UBERON:0000060!2.05e-09!13;UBERON:0001262!2.05e-09!13;UBERON:0004786!2.05e-09!13;UBERON:0003350!4.18e-07!9;UBERON:0004808!4.18e-07!9;UBERON:0001277!4.18e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.30e-16,31;UBERON:0000344,1.72e-10,15;UBERON:0001242,2.05e-09,13;UBERON:0001262,2.05e-09,13;UBERON:0004786,2.05e-09,13;UBERON:0005409,3.39e-09,47;UBERON:0003350,4.18e-07,9;UBERON:0004808,4.18e-07,9;UBERON:0001277,4.18e-07,9 | |||
|phase1_expression=22.1005409004616,188.446720125255,199.744666092006,302.766675518137,314.06162267636,135.310693160983,110.265166361088,8.13476937681931,12.8117737158017,15.6823232635736,13.3550015215894,10.0512920334124,12.497653284978,11.4520727168887,6.99530499812892,4.85940641735582,4.19737126876888,14.1957974411207,13.5743289269681,12.3072999021429,28.5745454907594,66.7235192069949,89.5915276746548,96.4754309444242,106.904724977301,140.112599244065,144.30526871329,117.647293046495,141.947494333911,121.226492414527,93.3485449858833,0,0,0,155.979874665688,84.9459037781896,134.139267064376,180.805664478344,131.264337879998,115.175223674236,295.8804384796,280.048648832963,193.233120506399,33.4885535815036,32.1364871965861,42.3992997493484,5.47673941043627,4.57852828398938,5.27246838562732,14.5822424305713,10.0790223570261,4.31257693094915,4.36234775750115,15.9579671242496,7.05796978199174,64.0575995729508,94.269501739851,51.5672092277442,47.9490012237247,53.4280889064753,45.0020296489387,9.82649143000483,6.22506357277798,20.2477436388315,20.7661936139065,28.419204597844,7.78960287347852,7.68436610643109,48.3193593357506,42.9318883894776,41.6443423475736,15.996455126613,17.8903518170807,47.4039392961872,40.0634068856228,39.5264078242309,31.9336054898227,25.9205296312931,24.577045320999,51.699424790236,52.6053950713856,44.7985498678814,22.0554569211091,27.0126052815206,29.4900618209243,35.6500588423138,36.3047786037712,44.7358669980721,37.5601918932593,35.2163470097621,30.1459068249745,12.9063581547208,48.2779646932503,9.17495425784289,27.9403859502498,28.2256938871321,25.1395512035836,37.1538103220166,21.5622383820381,22.2603931941514,20.4222958676187,50.047326191584,68.7974147207943,56.8853362522665,5.19578498426914,6.33399663687746,7.07734223020697,44.4175292107143,50.2339494275513,4.60170631100957,18.0424739836781,12.1786191324856,11.992005857315,9.64624899536784,15.7568867561844,3.64433114856059,37.3264401278905,14.749134405831,71.6534547079398,12.2942805960031,15.6797478106879,15.5160081003271,80.1484573237925,72.9024184558752,77.0763881073515,110.357447850111,11.5022519525683,16.197373736822,17.0274104277907,28.1606402081067,34.7700458142156,43.7277145352768,51.7996474172984,36.3115949409069,23.6878370797899,29.5279098783319,32.0793996128496,34.9583587414361,96.0346482047964,10.3116509384372,19.1277051155174,20.0014830857121,23.0479526150847,24.5648853072216,27.2826361596825,26.9038812598185,23.6128345890517,14.2286853906459,23.7124792226126,34.7955187508787,32.7269090944945,21.2619860454748,32.531528159395,23.3328951569852,20.7839957772023,35.6271337605103,30.8973802417823,33.7125758320277,36.941254921427,29.8261112451123,28.3776532577126,22.6878197440879,35.985199808952,27.7437566763839,31.1619568032504,30.4619467623034,27.0956135413615,26.9727940868162,19.4180622897907,11.4917224855367,10.2957388123237,9.5029991826466,11.6361561104257,9.66286215074677,54.465096678109,45.7925525087816,127.87206901473,97.5822590988478,29.6470668243975,32.280897388601,54.1243337552792,80.8750933739604,88.0617053625686,94.5421361779419,98.2275157397139,63.4090975687442,62.0797965736666,58.2942463080572,73.6964249310274,96.1736767260017,119.092065480957,125.85728469676,18.587454293402,35.0742933711867,41.7018621990398,38.0827983070738,39.5663073821957,33.8756010070239,34.400676195596,36.9025369949005,38.1506908654541,32.8236456031989,34.3885047421093,11.0117769772622,14.3488066432638,18.2138311031732,23.7346342024548,33.5236252055859,41.24938798859,52.9360892909492,30.8056930872567,30.7508782770651,46.0058260887535,43.1683499295464,35.8843324081745,38.8971472038552,32.4709318474661,20.2626278972614,43.0474933088189,28.6132031773432,26.5632911600502,28.3474293244564,22.9996443322732,33.5012514883632,33.0880660831559,31.6116509529634,46.9752729436449,50.9368786192182,44.0095161494664,37.524699069904,38.5087509560947,30.0870041849544,58.8086007363162,90.2883435139058,2.45882136509518,7.17435540392304,16.8578119487182,15.589154316763,27.7050057686581,5.04941854408746,18.2994767261429,15.2271110275689,16.5876016254255,13.3822526853429,20.0518806674155,18.3999745012741,16.5972387686707,13.7360253218317,14.6256477840214,80.6516504218736,52.9436517826842,19.0530195923963,25.4103656591579,34.9736660701775,31.8588332015911,33.5037277893874,27.5114436837923,39.2298565892268,29.2348873951965,48.8821885230845,37.7305308025603,43.9875812667782,30.658774541086,43.9291093530784,46.3841877729995,49.5050607591297,40.171873478947,23.9481255061643,9.70190128370659,18.6473220477485,31.743901821967,22.2961022002588,21.0622746370715,13.3964577610424,68.7588104626671,40.8835896767173,38.3719412615634,47.8170133530292,24.8655217111695,29.7342719895808,27.6943838087277,34.962011645698,98.5205227808896,17.8008289930089,23.9219233116994,25.3855847594764,34.6313766181361,10.5486335922627,8.74843057414561,7.77845788902177,14.10820968949,14.4149995893368,16.307596908922,13.3653886522116,28.153903428721,32.7344342074226,33.697666336402,29.48144973804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| |||
|short_description=p1@Lass6 | |||
}} |
Revision as of 09:00, 5 August 2015
Short description: | p1@Lass6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lass6_5end |
Coexpression cluster: | MCL_coexpression_mm9:163 |
Association with transcript: | 0bp_to_ENSMUST00000028426, ENSMUST00000141983_5end |
EntrezGene: | 241447 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.18e-07 | 9 |
epithelial cell of alimentary canal | 4.18e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.30e-16 | 31 |
mucosa | 1.72e-10 | 15 |
intestinal mucosa | 2.05e-09 | 13 |
wall of intestine | 2.05e-09 | 13 |
gastrointestinal system mucosa | 2.05e-09 | 13 |
gastrointestinal system | 3.39e-09 | 47 |
epithelium of mucosa | 4.18e-07 | 9 |
gastrointestinal system epithelium | 4.18e-07 | 9 |
intestinal epithelium | 4.18e-07 | 9 |