FFCP PHASE1:Mm9::chr15:6530936..6530950,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr15:6530936..6530950,+ to FFCP PHASE1:Mm9::chr15:6530936..6530950,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=316 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:6530936..6530950,+ | |||
|description=CAGE_peak_at_chr15:6530936..6530950,+ | |||
|id=chr15:6530936..6530950,+ | |||
|ontology_enrichment_celltype=CL:0002031!1.28e-08!25;CL:0000738!7.29e-07!17;CL:0002087!7.29e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,1.56e-12,2;CL:0002092,2.18e-08,3;CL:0002540,2.18e-08,3;CL:0000738,2.87e-08,17;CL:0002087,2.87e-08,17;CL:0000625,3.59e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.92e-22!48;UBERON:0002390!1.05e-20!45;UBERON:0003061!1.05e-20!45;UBERON:0002405!1.73e-15!70;UBERON:0004177!1.95e-14!29;UBERON:0002370!1.89e-11!23;UBERON:0000974!1.89e-11!23;UBERON:0004807!1.89e-11!23;UBERON:0005058!1.89e-11!23;UBERON:0003351!1.89e-11!23;UBERON:0009113!1.89e-11!23;UBERON:0003295!1.89e-11!23;UBERON:0009722!1.89e-11!23;UBERON:0005562!1.89e-11!23;UBERON:0007690!1.89e-11!23;UBERON:0006562!9.56e-11!24;UBERON:0003408!9.56e-11!24;UBERON:0001557!9.56e-11!24;UBERON:0001042!9.56e-11!24;UBERON:0008814!9.56e-11!24;UBERON:0009145!9.56e-11!24;UBERON:0003081!4.04e-10!88;UBERON:0000072!5.83e-09!27;UBERON:0005057!1.17e-08!51;UBERON:0002371!4.71e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.61e-15,48;UBERON:0002405,5.61e-15,48;UBERON:0002390,2.64e-13,45;UBERON:0003061,2.64e-13,45;UBERON:0002370,8.15e-11,23;UBERON:0000974,8.15e-11,23;UBERON:0004807,8.15e-11,23;UBERON:0005058,8.15e-11,23;UBERON:0003351,8.15e-11,23;UBERON:0009113,8.15e-11,23;UBERON:0003295,8.15e-11,23;UBERON:0009722,8.15e-11,23;UBERON:0005562,8.15e-11,23;UBERON:0007690,8.15e-11,23;UBERON:0006562,2.44e-10,24;UBERON:0003408,2.44e-10,24;UBERON:0001557,2.44e-10,24;UBERON:0001042,2.44e-10,24;UBERON:0008814,2.44e-10,24;UBERON:0009145,2.44e-10,24;UBERON:0000072,4.02e-09,27;UBERON:0004177,1.89e-08,29;UBERON:0005057,1.89e-08,29;UBERON:0000029,3.14e-07,1;UBERON:0001097,3.14e-07,1;UBERON:0003968,3.14e-07,1;UBERON:0001467,3.14e-07,1;UBERON:0000077,6.84e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0.903863264091034,0.140788722151667,0.936258105287974,0,0,0.684802919724823,1.22388563386596,0.999329285446988,0.202475267389826,0,0.157731082679119,0.411343300817216,0,0,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0.221730510655305,0.635030673459631,0,0,0.288851619751275,0,0,1.25559489221072,0,0,0.588231488031014,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,1.45072428402269,3.36093799142464,0,0,0,0,0,0,0,0,1.3498495759221,1.97773272513395,0.7104801149461,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0.186399445825301,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,5.69663344023778,0,0,0,0,0,0,0.125666591329675,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0,0,0.393117990226406,0,0,0,0,0,0.486405680325106,0,5.75072826109418,0,0,0,0.179397413521912,0,0.184753190166605,0,0,0,0,0,0,0,0.315270288212382,0,0,0,0.172684981865896,0,3.01582567878545,3.26343410291226,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0.321321316421807,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0,0.376736914009382,0.683471138605126,0.457556346413045,0.339956859987711,0.279902904647316,0,0,0,0,0,0,0,0.269728692769641,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,1.26404448251271,0.202725215290164,0.102710957164827,0,0.895133478337407,0.79472541912506,0.600977247599844,0.443068581523732,1.21159739937777,1.06689529317,2.21817607301049,1.07203668813728,0.865906574762965,1.05189211963412,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441596760403192,0,0,0,0,0,0,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.903863264091034,0.140788722151667,0.936258105287974,0,0,0.684802919724823,1.22388563386596,0.999329285446988,0.202475267389826,0,0.157731082679119,0.411343300817216,0,0,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0.221730510655305,0.635030673459631,0,0,0.288851619751275,0,0,1.25559489221072,0,0,0.588231488031014,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,1.45072428402269,3.36093799142464,0,0,0,0,0,0,0,0,1.3498495759221,1.97773272513395,0.7104801149461,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0.186399445825301,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,5.69663344023778,0,0,0,0,0,0,0.125666591329675,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0,0,0.20778804455956,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0,0,0.393117990226406,0,0,0,0,0,0.486405680325106,0,5.75072826109418,0,0,0,0.179397413521912,0,0.184753190166605,0,0,0,0,0,0,0,0.315270288212382,0,0,0,0.172684981865896,0,3.01582567878545,3.26343410291226,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0.321321316421807,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0,0.376736914009382,0.683471138605126,0.457556346413045,0.339956859987711,0.279902904647316,0,0,0,0,0,0,0,0.269728692769641,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,1.26404448251271,0.202725215290164,0.102710957164827,0,0.895133478337407,0.79472541912506,0.600977247599844,0.443068581523732,1.21159739937777,1.06689529317,2.21817607301049,1.07203668813728,0.865906574762965,1.05189211963412,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441596760403192,0,0,0,0,0,0,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:6530936..6530950,+ | |||
}} | }} |
Latest revision as of 09:24, 5 August 2015
Short description: | p@chr15:6530936..6530950, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:6530936..6530950, + |
Coexpression cluster: | MCL_coexpression_mm9:316 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 1.56e-12 | 2 |
bone marrow cell | 2.18e-08 | 3 |
mesenchymal stem cell of the bone marrow | 2.18e-08 | 3 |
leukocyte | 2.87e-08 | 17 |
nongranular leukocyte | 2.87e-08 | 17 |
CD8-positive, alpha-beta T cell | 3.59e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.61e-15 | 48 |
immune system | 5.61e-15 | 48 |
hematopoietic system | 2.64e-13 | 45 |
blood island | 2.64e-13 | 45 |
thymus | 8.15e-11 | 23 |
neck | 8.15e-11 | 23 |
respiratory system epithelium | 8.15e-11 | 23 |
hemolymphoid system gland | 8.15e-11 | 23 |
pharyngeal epithelium | 8.15e-11 | 23 |
thymic region | 8.15e-11 | 23 |
pharyngeal gland | 8.15e-11 | 23 |
entire pharyngeal arch endoderm | 8.15e-11 | 23 |
thymus primordium | 8.15e-11 | 23 |
early pharyngeal endoderm | 8.15e-11 | 23 |
pharynx | 2.44e-10 | 24 |
gland of gut | 2.44e-10 | 24 |
upper respiratory tract | 2.44e-10 | 24 |
chordate pharynx | 2.44e-10 | 24 |
pharyngeal arch system | 2.44e-10 | 24 |
pharyngeal region of foregut | 2.44e-10 | 24 |
segment of respiratory tract | 4.02e-09 | 27 |
hemopoietic organ | 1.89e-08 | 29 |
immune organ | 1.89e-08 | 29 |
lymph node | 3.14e-07 | 1 |
axillary lymph node | 3.14e-07 | 1 |
peripheral lymph node | 3.14e-07 | 1 |
shoulder | 3.14e-07 | 1 |
mixed endoderm/mesoderm-derived structure | 6.84e-07 | 35 |