FFCP PHASE1:Mm9::chr15:75693658..75693668,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=191 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:75693658..75693668,+ | |||
|description=CAGE_peak_at_chr15:75693658..75693668,+ | |description=CAGE_peak_at_chr15:75693658..75693668,+ | ||
|id=chr15:75693658..75693668,+ | |id=chr15:75693658..75693668,+ | ||
|ontology_enrichment_celltype=CL:0000239!1.43e-12!6;CL:0000677!1.43e-12!6;CL:0000212!1.43e-12!6;CL:0000584!1.43e-12!6;CL:0000075!1.21e-10!7;CL:0002563!4.46e-08!9;CL:0002251!4.46e-08!9;CL:0000473!1.68e-07!3;CL:0000627!1.68e-07!3;CL:0000682!1.68e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.37e-12,3;CL:0000239,6.88e-11,6;CL:0000677,6.88e-11,6;CL:0000584,6.88e-11,6;CL:0000075,2.42e-09,7;CL:0002563,2.83e-07,9;CL:0002251,2.83e-07,9;CL:0000066,5.45e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.94e-24!43;UBERON:0005409!4.43e-20!59;UBERON:0000344!2.12e-18!15;UBERON:0001242!1.25e-14!13;UBERON:0000060!1.25e-14!13;UBERON:0001262!1.25e-14!13;UBERON:0004786!1.25e-14!13;UBERON:0004923!4.01e-12!24;UBERON:0004119!3.45e-08!130;UBERON:0000925!3.45e-08!130;UBERON:0006595!3.45e-08!130;UBERON:0003350!4.46e-08!9;UBERON:0004808!4.46e-08!9;UBERON:0001277!4.46e-08!9;UBERON:0001007!1.08e-07!128;UBERON:0001555!1.08e-07!128;UBERON:0007026!1.08e-07!128;UBERON:0000331!8.87e-07!3;UBERON:0002116!8.87e-07!3;UBERON:0001204!8.87e-07!3;UBERON:0001168!8.87e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.05e-39,31;UBERON:0005409,4.49e-25,47;UBERON:0000344,3.88e-24,15;UBERON:0001242,9.63e-18,13;UBERON:0001262,9.63e-18,13;UBERON:0004786,9.63e-18,13;UBERON:0002108,1.21e-14,4;UBERON:0004923,1.86e-14,24;UBERON:0000331,2.97e-11,3;UBERON:0002116,2.97e-11,3;UBERON:0001204,2.97e-11,3;UBERON:0001168,2.97e-11,3;UBERON:0001007,1.31e-10,116;UBERON:0001555,1.31e-10,116;UBERON:0007026,1.31e-10,116;UBERON:0004119,2.30e-10,118;UBERON:0000925,2.30e-10,118;UBERON:0006595,2.30e-10,118;UBERON:0001962,4.80e-09,2;UBERON:0001961,4.80e-09,2;UBERON:0001744,4.80e-09,2;UBERON:0004921,2.54e-08,114;UBERON:0003350,2.83e-07,9;UBERON:0004808,2.83e-07,9;UBERON:0001277,2.83e-07,9 | |||
|phase1_expression=0,11.8651638597383,10.4649825059593,3.62957053568196,4.00716583957078,0.671517087647559,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.71968175732308,7.79991555628378,10.3361753540704,6.46142994238612,4.09395342103189,2.09025761402011,1.76421090831952,1.77384408524244,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95628174475697,7.1401652999157,0,0,0,0.605050573870028,0.444756087689741,1.90225626112559,3.32170343081158,1.64698954724011,1.25667604400135,1.59165177632921,0.58489226135736,2.69645822596266,1.29682829924817,1.99141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,2.91480836629851,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0.187283014939765,0,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.237270036248348,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,11.8651638597383,10.4649825059593,3.62957053568196,4.00716583957078,0.671517087647559,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.71968175732308,7.79991555628378,10.3361753540704,6.46142994238612,4.09395342103189,2.09025761402011,1.76421090831952,1.77384408524244,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95628174475697,7.1401652999157,0,0,0,0.605050573870028,0.444756087689741,1.90225626112559,3.32170343081158,1.64698954724011,1.25667604400135,1.59165177632921,0.58489226135736,2.69645822596266,1.29682829924817,1.99141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,2.91480836629851,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0.187283014939765,0,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.237270036248348,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr15:75693658..75693668,+ | |short_description=p@chr15:75693658..75693668,+ | ||
}} | }} |
Latest revision as of 11:54, 5 August 2015
Short description: | p@chr15:75693658..75693668, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:75693658..75693668, + |
Coexpression cluster: | MCL_coexpression_mm9:191 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.37e-12 | 3 |
brush border epithelial cell | 6.88e-11 | 6 |
gut absorptive cell | 6.88e-11 | 6 |
enterocyte | 6.88e-11 | 6 |
columnar/cuboidal epithelial cell | 2.42e-09 | 7 |
intestinal epithelial cell | 2.83e-07 | 9 |
epithelial cell of alimentary canal | 2.83e-07 | 9 |
epithelial cell | 5.45e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.05e-39 | 31 |
gastrointestinal system | 4.49e-25 | 47 |
mucosa | 3.88e-24 | 15 |
intestinal mucosa | 9.63e-18 | 13 |
wall of intestine | 9.63e-18 | 13 |
gastrointestinal system mucosa | 9.63e-18 | 13 |
small intestine | 1.21e-14 | 4 |
organ component layer | 1.86e-14 | 24 |
ileal mucosa | 2.97e-11 | 3 |
ileum | 2.97e-11 | 3 |
mucosa of small intestine | 2.97e-11 | 3 |
wall of small intestine | 2.97e-11 | 3 |
digestive system | 1.31e-10 | 116 |
digestive tract | 1.31e-10 | 116 |
primitive gut | 1.31e-10 | 116 |
endoderm-derived structure | 2.30e-10 | 118 |
endoderm | 2.30e-10 | 118 |
presumptive endoderm | 2.30e-10 | 118 |
gut-associated lymphoid tissue | 4.80e-09 | 2 |
mucosa-associated lymphoid tissue | 4.80e-09 | 2 |
lymphoid tissue | 4.80e-09 | 2 |
subdivision of digestive tract | 2.54e-08 | 114 |
epithelium of mucosa | 2.83e-07 | 9 |
gastrointestinal system epithelium | 2.83e-07 | 9 |
intestinal epithelium | 2.83e-07 | 9 |