FFCP PHASE1:Mm9::chr1:24237646..24237669,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=488 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:24237646..24237669,+ | |||
|description=CAGE_peak_at_chr1:24237646..24237669,+ | |description=CAGE_peak_at_chr1:24237646..24237669,+ | ||
|id=chr1:24237646..24237669,+ | |id=chr1:24237646..24237669,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002374,4.59e-10,1;CL:0000202,4.59e-10,1;CL:0000199,4.59e-10,1;CL:0000855,4.59e-10,1;CL:0000589,4.59e-10,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005085!4.21e-13!13;UBERON:0000020!4.08e-12!12;UBERON:0001032!4.08e-12!12;UBERON:0004456!4.08e-12!12;UBERON:0000970!8.43e-11!9;UBERON:0000019!8.43e-11!9;UBERON:0000047!8.43e-11!9;UBERON:0004088!8.43e-11!9;UBERON:0002104!8.43e-11!9;UBERON:0001456!8.43e-11!9;UBERON:0003072!8.43e-11!9;UBERON:0003071!8.43e-11!9;UBERON:0004128!8.43e-11!9;UBERON:0001444!1.86e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000020,1.30e-35,12;UBERON:0001032,1.30e-35,12;UBERON:0004456,1.30e-35,12;UBERON:0000970,4.34e-35,9;UBERON:0000019,4.34e-35,9;UBERON:0000047,4.34e-35,9;UBERON:0010312,4.34e-35,9;UBERON:0004088,4.34e-35,9;UBERON:0002104,4.34e-35,9;UBERON:0001456,4.34e-35,9;UBERON:0003072,4.34e-35,9;UBERON:0004128,4.34e-35,9;UBERON:0003071,4.34e-35,9;UBERON:0000033,7.19e-33,13;UBERON:0005085,7.19e-33,13;UBERON:0001444,9.92e-29,11;UBERON:0007811,9.24e-12,36;UBERON:0000153,8.47e-10,43;UBERON:0010371,2.87e-09,73;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95;UBERON:0003056,1.51e-08,49;UBERON:0002346,2.22e-08,64;UBERON:0003075,2.22e-08,64;UBERON:0007284,2.22e-08,64;UBERON:0010314,3.12e-07,92 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68952813725088,0,0,0,0.571301968807607,0.220868540951614,0,0,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0,0.30559649555362,1.47314292736834,0.569486723196412,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324482526135515,0,0.124406970610093,0,0,6.37590170517248,3.21862946206862,2.52086981727489,1.65775299619287,2.24520447199382,1.40925092313335,0.937017245597288,0.258703370739016,0,0.189106080167819,0.351902248327898,0.657587197282725,0.278047249225598,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.321101179975584,0.586058432961016,0,0,0,0,0,0.477937595905104,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0.728341908464944,0.604647113929502,0.377210159511796,0.295301892880773,0,0,0,0,0,0,0,0,1.98067203434441,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0.726511433089237,0.798049746802062,0.341467211508268,0.243106717068294,0,0.367687016900028,0.44449345560323,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0,0,0.118635018124174,0,0.409231043169689,0.154936841185966,0.385813221962283,0.249810577937946,0,0,0.191288332068843,0.220591419119515,0.463735671240843 | |phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68952813725088,0,0,0,0.571301968807607,0.220868540951614,0,0,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0,0.30559649555362,1.47314292736834,0.569486723196412,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.704217098883403,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324482526135515,0,0.124406970610093,0,0,6.37590170517248,3.21862946206862,2.52086981727489,1.65775299619287,2.24520447199382,1.40925092313335,0.937017245597288,0.258703370739016,0,0.189106080167819,0.351902248327898,0.657587197282725,0.278047249225598,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.321101179975584,0.586058432961016,0,0,0,0,0,0.477937595905104,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0.728341908464944,0.604647113929502,0.377210159511796,0.295301892880773,0,0,0,0,0,0,0,0,1.98067203434441,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0.726511433089237,0.798049746802062,0.341467211508268,0.243106717068294,0,0.367687016900028,0.44449345560323,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0,0,0.118635018124174,0,0.409231043169689,0.154936841185966,0.385813221962283,0.249810577937946,0,0,0.191288332068843,0.220591419119515,0.463735671240843 | ||
|short_description=p@chr1:24237646..24237669,+ | |short_description=p@chr1:24237646..24237669,+ | ||
}} | }} |
Latest revision as of 13:31, 5 August 2015
Short description: | p@chr1:24237646..24237669, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:24237646..24237669, + |
Coexpression cluster: | MCL_coexpression_mm9:488 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ear hair cell | 4.59e-10 | 1 |
auditory hair cell | 4.59e-10 | 1 |
mechanoreceptor cell | 4.59e-10 | 1 |
sensory hair cell | 4.59e-10 | 1 |
cochlear inner hair cell | 4.59e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
sense organ | 1.30e-35 | 12 |
sensory system | 1.30e-35 | 12 |
entire sense organ system | 1.30e-35 | 12 |
eye | 4.34e-35 | 9 |
camera-type eye | 4.34e-35 | 9 |
simple eye | 4.34e-35 | 9 |
immature eye | 4.34e-35 | 9 |
ocular region | 4.34e-35 | 9 |
visual system | 4.34e-35 | 9 |
face | 4.34e-35 | 9 |
optic cup | 4.34e-35 | 9 |
optic vesicle | 4.34e-35 | 9 |
eye primordium | 4.34e-35 | 9 |
head | 7.19e-33 | 13 |
ectodermal placode | 7.19e-33 | 13 |
subdivision of head | 9.92e-29 | 11 |
craniocervical region | 9.24e-12 | 36 |
anterior region of body | 8.47e-10 | 43 |
ecto-epithelium | 2.87e-09 | 73 |
ectoderm-derived structure | 9.21e-09 | 95 |
ectoderm | 9.21e-09 | 95 |
presumptive ectoderm | 9.21e-09 | 95 |
pre-chordal neural plate | 1.51e-08 | 49 |
neurectoderm | 2.22e-08 | 64 |
neural plate | 2.22e-08 | 64 |
presumptive neural plate | 2.22e-08 | 64 |
structure with developmental contribution from neural crest | 3.12e-07 | 92 |