FFCP PHASE1:Mm9::chr13:106689021..106689037,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=64 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:106689021..106689037,+ | |||
|description=CAGE_peak_at_chr13:106689021..106689037,+ | |description=CAGE_peak_at_chr13:106689021..106689037,+ | ||
|id=chr13:106689021..106689037,+ | |id=chr13:106689021..106689037,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000723,3.04e-10,91;CL:0000048,3.04e-10,91;CL:0000034,5.33e-09,97;CL:0002321,9.67e-08,70;CL:0002320,1.98e-07,46;CL:0000134,1.98e-07,46;CL:0000182,6.12e-07,5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.97e-09!73;UBERON:0005743!5.97e-09!73;UBERON:0000073!8.75e-09!75;UBERON:0001016!8.75e-09!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.21e-08,73;UBERON:0001016,3.36e-08,75;UBERON:0002021,5.46e-08,10;UBERON:0000411,5.46e-08,10;UBERON:0001950,5.46e-08,10;UBERON:0002384,1.98e-07,46 | |||
|phase1_expression=0,0,0.454999239389536,0.30246421130683,0.500895729946347,0.16787927191189,0.467225281191051,0.645616617207881,0.422366166455,0.468129052643987,0.171217968225505,0,0.684802919724823,0.174840804837995,1.66554880907831,0.404950534779652,2.79824751251259,0.473193248037357,0.411343300817216,0,0.17008658030214,0.198581902401771,0.783599367416806,0.799962113967033,0.22940928106717,0.57423196411502,0.430761996159075,0.215471232685889,1.33016393619462,0.504060259519861,0,1.90509202037889,0,1568.96864205284,0,0,0,0,0,0,0,0,0.485510353031154,0.377690453926732,0.304130793658544,0.183546752161682,5.47673941043627,0.218025156380447,0.659058548203415,0,0,0,0,0,1.68046899571232,0.514518872071894,0.573066879877513,1.03134418455488,1.01158230429799,0,0,1.69422266034566,0,0.899899717281399,7.9109309005358,10.6572017241915,7.78960287347852,5.76327457982332,1.34796496001021,1.21505344498522,0.841299845405528,2.57085885963423,0.441737081903227,0.489963196859816,0,0,31.9336054898227,2.93680877595932,0.768032666281217,0.527545150920775,0,0,0.837548997004143,11.8180148106653,1.68078072554491,4.12480019663135,1.56608848879013,0.372798891650601,0.605809546665472,0.0755715601067855,1.15945795480671,1.72084775396277,1.3599426674155,8.63525106620507,4.54843492213368,2.24013443548668,0.280888840263504,0.170430322578058,2.33807404142582,3.18005617059306,0,1.28326477414318,2.54805239706646,7.11066703153331,0.865964164044856,1.01343946190039,0,0,0,0.593768556259299,1.04091196059682,0,0,0.150722640552623,0,0,0.988779870937496,0.144599356919912,0,0.323533699894818,0.220841518460394,0.484875253135222,1.86391761218122,0.878342391034642,1.04723353406728,1.02182822083437,0,0,0,1.04853447583376,0.915001205637253,0.502617408451458,1.21677024134594,0.255715457330331,0.83115217823824,0.324482526135515,0.407357455401265,0.248813941220186,1.26361379216837,0.420883711772948,0.260240885925407,0.689706313300419,0.360124259610698,0.452114453507145,0.272145996605311,0,0,0,0.862271971731369,0.567318240503458,0.527853372491847,0.43839146485515,0,0,0,0,0,0,0,0.828503090142008,0.234526059981096,1.08037236876609,1.18372367792605,0,0.154267112887378,0,0,0.233530684734339,0.16455984991348,0.32833492815819,0.243206428637567,0.292399974850665,0,0.268412837520744,0.630869845692382,0.102904612379284,2.31293148088659,0.793351699990633,0.639864751605702,0,0.515469845288373,1.4117846723634,0.667134131534611,0.380451252225118,1.89811624617805,0.164698954724011,0.251335208800269,0.397912944082302,0.38992817423824,0,0.432276099749388,0.199141273254367,0.189667900953082,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0.333690211432188,0.589676985339609,0.224862112384854,0.608580364165509,0.241177159752417,0.50925170356284,0.287696137450811,0.162135226775035,0.274561413188081,0,1.11642284300551,0,0.252578877947112,0.179397413521912,0,0.369506380333209,0.37898282354097,0.651859905768103,0.169745085775188,0,0.167506257441816,0.238043640886014,0,0,0,0.478364305972461,0,0.518054945597687,0.144649058581512,1.50791283939272,2.17562273527484,0.491764273019036,0.275936746304732,0.642202359951168,0.468846746368813,0.327869890753351,0.504941854408746,0.94652465824877,0.390438744296638,1.50796378412959,1.91175038362042,1.78238939265915,0.849229592366497,1.61924280669958,0.584511715822624,1.18586333383957,0.963963949265421,0.709700426041343,0.35613120733451,0,1.15479086080775,1.32745138339963,0,0,0.188605079755898,0.295301892880773,0,1.29214146584111,0.727067458955011,0.712994756769443,0.632073515871632,0,1.03135543248187,0.340439605753788,0,0.129358683782755,0.428674070063185,0.532020700926821,0,0.164549020602121,0.608929898229199,0.704015124191131,0.21183207086382,0,0,0,0.0603129249281559,0.596861720015682,0,1.1659233465194,1.29797711407357,0.170870880797853,0,0.555583582109135,0,0.410082683163076,0.457556346413045,0,0,0,0.954670618015114,0.474503990371703,0.609958401380546,0,0.209088296014469,0.655087691238533,0.134864346384821,0.0826534557253359,0.26175594198403,0.259229946583586,0.621339313086926,1.12738587736838,0.149516546043979,0.165458490457098,0.194451188344048,0,0,0,0.13020438484395,0,0.483168241652012,0.288030006257865,0,0.202725215290164,0.410843828659309,0.51968329191118,0.358053391334963,0.39736270956253,0,0.443068581523732,0,0,0.201652370273681,0,0.192423683280659,0.116876902181569,0.453460767230423,0.443971906748129,0.538283139656854,0.167884616364078,0.386379188064381,0.375364950902364,0.183151624267265,0.857473516316263,0,1.6942555278512,0.920650473014354,2.29158205375759,0.515559547031063,1.37016503954128,2.2661816921691,1.35004500046361,3.60256962579376,3.17199686288943,5.1776031175182,0.415149390336707,0.399024873401031,0.341467211508268,0.486213434136588,0.419226325255965,0.367687016900028,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.280924522409647,0.0640251524048693,0,0,0.347652977834566,0.38581844092741,0,0,0.685738504770831,0.354951612318675,0,0.145346416632329,0.0941093804153306,0.338458431566706,0.365855945745545,0.526139422875686,0,0,0.118635018124174,0.197008964751127,0,0.309873682371932,1.73615949883027,2.49810577937946,0.935726433781634,1.07435527024149,0.191288332068843,0,0.231867835620421 | |phase1_expression=0,0,0.454999239389536,0.30246421130683,0.500895729946347,0.16787927191189,0.467225281191051,0.645616617207881,0.422366166455,0.468129052643987,0.171217968225505,0,0.684802919724823,0.174840804837995,1.66554880907831,0.404950534779652,2.79824751251259,0.473193248037357,0.411343300817216,0,0.17008658030214,0.198581902401771,0.783599367416806,0.799962113967033,0.22940928106717,0.57423196411502,0.430761996159075,0.215471232685889,1.33016393619462,0.504060259519861,0,1.90509202037889,0,1568.96864205284,0,0,0,0,0,0,0,0,0.485510353031154,0.377690453926732,0.304130793658544,0.183546752161682,5.47673941043627,0.218025156380447,0.659058548203415,0,0,0,0,0,1.68046899571232,0.514518872071894,0.573066879877513,1.03134418455488,1.01158230429799,0,0,1.69422266034566,0,0.899899717281399,7.9109309005358,10.6572017241915,7.78960287347852,5.76327457982332,1.34796496001021,1.21505344498522,0.841299845405528,2.57085885963423,0.441737081903227,0.489963196859816,0,0,31.9336054898227,2.93680877595932,0.768032666281217,0.527545150920775,0,0,0.837548997004143,11.8180148106653,1.68078072554491,4.12480019663135,1.56608848879013,0.372798891650601,0.605809546665472,0.0755715601067855,1.15945795480671,1.72084775396277,1.3599426674155,8.63525106620507,4.54843492213368,2.24013443548668,0.280888840263504,0.170430322578058,2.33807404142582,3.18005617059306,0,1.28326477414318,2.54805239706646,7.11066703153331,0.865964164044856,1.01343946190039,0,0,0,0.593768556259299,1.04091196059682,0,0,0.150722640552623,0,0,0.988779870937496,0.144599356919912,0,0.323533699894818,0.220841518460394,0.484875253135222,1.86391761218122,0.878342391034642,1.04723353406728,1.02182822083437,0,0,0,1.04853447583376,0.915001205637253,0.502617408451458,1.21677024134594,0.255715457330331,0.83115217823824,0.324482526135515,0.407357455401265,0.248813941220186,1.26361379216837,0.420883711772948,0.260240885925407,0.689706313300419,0.360124259610698,0.452114453507145,0.272145996605311,0,0,0,0.862271971731369,0.567318240503458,0.527853372491847,0.43839146485515,0,0,0,0,0,0,0,0.828503090142008,0.234526059981096,1.08037236876609,1.18372367792605,0,0.154267112887378,0,0,0.233530684734339,0.16455984991348,0.32833492815819,0.243206428637567,0.292399974850665,0,0.268412837520744,0.630869845692382,0.102904612379284,2.31293148088659,0.793351699990633,0.639864751605702,0,0.515469845288373,1.4117846723634,0.667134131534611,0.380451252225118,1.89811624617805,0.164698954724011,0.251335208800269,0.397912944082302,0.38992817423824,0,0.432276099749388,0.199141273254367,0.189667900953082,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0.333690211432188,0.589676985339609,0.224862112384854,0.608580364165509,0.241177159752417,0.50925170356284,0.287696137450811,0.162135226775035,0.274561413188081,0,1.11642284300551,0,0.252578877947112,0.179397413521912,0,0.369506380333209,0.37898282354097,0.651859905768103,0.169745085775188,0,0.167506257441816,0.238043640886014,0,0,0,0.478364305972461,0,0.518054945597687,0.144649058581512,1.50791283939272,2.17562273527484,0.491764273019036,0.275936746304732,0.642202359951168,0.468846746368813,0.327869890753351,0.504941854408746,0.94652465824877,0.390438744296638,1.50796378412959,1.91175038362042,1.78238939265915,0.849229592366497,1.61924280669958,0.584511715822624,1.18586333383957,0.963963949265421,0.709700426041343,0.35613120733451,0,1.15479086080775,1.32745138339963,0,0,0.188605079755898,0.295301892880773,0,1.29214146584111,0.727067458955011,0.712994756769443,0.632073515871632,0,1.03135543248187,0.340439605753788,0,0.129358683782755,0.428674070063185,0.532020700926821,0,0.164549020602121,0.608929898229199,0.704015124191131,0.21183207086382,0,0,0,0.0603129249281559,0.596861720015682,0,1.1659233465194,1.29797711407357,0.170870880797853,0,0.555583582109135,0,0.410082683163076,0.457556346413045,0,0,0,0.954670618015114,0.474503990371703,0.609958401380546,0,0.209088296014469,0.655087691238533,0.134864346384821,0.0826534557253359,0.26175594198403,0.259229946583586,0.621339313086926,1.12738587736838,0.149516546043979,0.165458490457098,0.194451188344048,0,0,0,0.13020438484395,0,0.483168241652012,0.288030006257865,0,0.202725215290164,0.410843828659309,0.51968329191118,0.358053391334963,0.39736270956253,0,0.443068581523732,0,0,0.201652370273681,0,0.192423683280659,0.116876902181569,0.453460767230423,0.443971906748129,0.538283139656854,0.167884616364078,0.386379188064381,0.375364950902364,0.183151624267265,0.857473516316263,0,1.6942555278512,0.920650473014354,2.29158205375759,0.515559547031063,1.37016503954128,2.2661816921691,1.35004500046361,3.60256962579376,3.17199686288943,5.1776031175182,0.415149390336707,0.399024873401031,0.341467211508268,0.486213434136588,0.419226325255965,0.367687016900028,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0.280924522409647,0.0640251524048693,0,0,0.347652977834566,0.38581844092741,0,0,0.685738504770831,0.354951612318675,0,0.145346416632329,0.0941093804153306,0.338458431566706,0.365855945745545,0.526139422875686,0,0,0.118635018124174,0.197008964751127,0,0.309873682371932,1.73615949883027,2.49810577937946,0.935726433781634,1.07435527024149,0.191288332068843,0,0.231867835620421 | ||
|short_description=p@chr13:106689021..106689037,+ | |short_description=p@chr13:106689021..106689037,+ | ||
}} | }} |
Latest revision as of 13:55, 5 August 2015
Short description: | p@chr13:106689021..106689037, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:106689021..106689037, + |
Coexpression cluster: | MCL_coexpression_mm9:64 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 3.04e-10 | 91 |
multi fate stem cell | 3.04e-10 | 91 |
stem cell | 5.33e-09 | 97 |
embryonic cell | 9.67e-08 | 70 |
connective tissue cell | 1.98e-07 | 46 |
mesenchymal cell | 1.98e-07 | 46 |
hepatocyte | 6.12e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.21e-08 | 73 |
nervous system | 3.36e-08 | 75 |
occipital lobe | 5.46e-08 | 10 |
visual cortex | 5.46e-08 | 10 |
neocortex | 5.46e-08 | 10 |
connective tissue | 1.98e-07 | 46 |