FFCP PHASE1:Mm9::chr4:49562541..49562577,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=88|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:49562541..49562577,+|id=chr4:49562541..49562577,+|ontology_enrichment_celltype=CL:0002563!1.67e-17!9;CL:0002251!1.67e-17!9;CL:0000066!2.42e-17!25;CL:0000239!6.49e-16!6;CL:0000677!6.49e-16!6;CL:0000212!6.49e-16!6;CL:0000584!6.49e-16!6;CL:0000223!1.11e-13!20;CL:0000075!1.59e-13!7;CL:0002076!6.52e-10!15;CL:0000473!3.76e-08!3;CL:0000627!3.76e-08!3;CL:0000682!3.76e-08!3|ontology_enrichment_celltype_v019_2=CL:0000239,1.26e-26,6;CL:0000677,1.26e-26,6;CL:0000584,1.26e-26,6;CL:0000075,6.69e-23,7;CL:0002563,6.35e-18,9;CL:0002251,6.35e-18,9;CL:0000066,4.69e-14,25;CL:0000223,2.08e-12,20;CL:0002076,6.38e-11,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003350!1.67e-17!9;UBERON:0004808!1.67e-17!9;UBERON:0001277!1.67e-17!9;UBERON:0000485!4.72e-14!11;UBERON:0003929!3.21e-12!55;UBERON:0001242!1.16e-11!13;UBERON:0000060!1.16e-11!13;UBERON:0001262!1.16e-11!13;UBERON:0004786!1.16e-11!13;UBERON:0002107!2.06e-11!22;UBERON:0007499!2.06e-11!22;UBERON:0006925!2.06e-11!22;UBERON:0009497!2.06e-11!22;UBERON:0000015!2.06e-11!22;UBERON:0002423!2.06e-11!22;UBERON:0006235!2.06e-11!22;UBERON:0008835!2.06e-11!22;UBERON:0003894!2.06e-11!22;UBERON:0004161!2.06e-11!22;UBERON:0008836!2.06e-11!22;UBERON:0009854!8.14e-11!23;UBERON:0009856!8.14e-11!23;UBERON:0000344!6.52e-10!15;UBERON:0002365!9.11e-10!25;UBERON:0002330!9.11e-10!25;UBERON:0000160!1.61e-09!43;UBERON:0000490!1.93e-09!66;UBERON:0005911!7.71e-09!69;UBERON:0005172!7.89e-08!49;UBERON:0005173!7.89e-08!49;UBERON:0002417!7.89e-08!49;UBERON:0000916!7.89e-08!49;UBERON:0004921!2.13e-07!126;UBERON:0004185!2.13e-07!126;UBERON:0001007!3.42e-07!128;UBERON:0001555!3.42e-07!128;UBERON:0007026!3.42e-07!128;UBERON:0004119!5.41e-07!130;UBERON:0000925!5.41e-07!130;UBERON:0006595!5.41e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0003350,6.35e-18,9;UBERON:0004808,6.35e-18,9;UBERON:0001277,6.35e-18,9;UBERON:0000485,9.52e-15,11;UBERON:0001242,1.53e-12,13;UBERON:0001262,1.53e-12,13;UBERON:0004786,1.53e-12,13;UBERON:0000344,6.38e-11,15;UBERON:0004923,6.04e-07,24|phase1_expression=0,1.04692622291808,4.09499315450582,8.77146212789807,9.01612313903425,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14846392823004,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07940638327563,0.649776417447669,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.59857431606684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0.140271639780637,0,0.147610147979602,0.31399745568275,1.1105744752962,1.1858105083486,0,0,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0.505157755894224,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr4:49562541..49562577,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:49562541..49562577,+ | |||
|description=CAGE_peak_at_chr4:49562541..49562577,+ | |||
|id=chr4:49562541..49562577,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.67e-17!9;CL:0002251!1.67e-17!9;CL:0000066!2.42e-17!25;CL:0000239!6.49e-16!6;CL:0000677!6.49e-16!6;CL:0000212!6.49e-16!6;CL:0000584!6.49e-16!6;CL:0000223!1.11e-13!20;CL:0000075!1.59e-13!7;CL:0002076!6.52e-10!15;CL:0000473!3.76e-08!3;CL:0000627!3.76e-08!3;CL:0000682!3.76e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.26e-26,6;CL:0000677,1.26e-26,6;CL:0000584,1.26e-26,6;CL:0000075,6.69e-23,7;CL:0002563,6.35e-18,9;CL:0002251,6.35e-18,9;CL:0000066,4.69e-14,25;CL:0000223,2.08e-12,20;CL:0002076,6.38e-11,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!1.67e-17!9;UBERON:0004808!1.67e-17!9;UBERON:0001277!1.67e-17!9;UBERON:0000485!4.72e-14!11;UBERON:0003929!3.21e-12!55;UBERON:0001242!1.16e-11!13;UBERON:0000060!1.16e-11!13;UBERON:0001262!1.16e-11!13;UBERON:0004786!1.16e-11!13;UBERON:0002107!2.06e-11!22;UBERON:0007499!2.06e-11!22;UBERON:0006925!2.06e-11!22;UBERON:0009497!2.06e-11!22;UBERON:0000015!2.06e-11!22;UBERON:0002423!2.06e-11!22;UBERON:0006235!2.06e-11!22;UBERON:0008835!2.06e-11!22;UBERON:0003894!2.06e-11!22;UBERON:0004161!2.06e-11!22;UBERON:0008836!2.06e-11!22;UBERON:0009854!8.14e-11!23;UBERON:0009856!8.14e-11!23;UBERON:0000344!6.52e-10!15;UBERON:0002365!9.11e-10!25;UBERON:0002330!9.11e-10!25;UBERON:0000160!1.61e-09!43;UBERON:0000490!1.93e-09!66;UBERON:0005911!7.71e-09!69;UBERON:0005172!7.89e-08!49;UBERON:0005173!7.89e-08!49;UBERON:0002417!7.89e-08!49;UBERON:0000916!7.89e-08!49;UBERON:0004921!2.13e-07!126;UBERON:0004185!2.13e-07!126;UBERON:0001007!3.42e-07!128;UBERON:0001555!3.42e-07!128;UBERON:0007026!3.42e-07!128;UBERON:0004119!5.41e-07!130;UBERON:0000925!5.41e-07!130;UBERON:0006595!5.41e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,6.35e-18,9;UBERON:0004808,6.35e-18,9;UBERON:0001277,6.35e-18,9;UBERON:0000485,9.52e-15,11;UBERON:0001242,1.53e-12,13;UBERON:0001262,1.53e-12,13;UBERON:0004786,1.53e-12,13;UBERON:0000344,6.38e-11,15;UBERON:0004923,6.04e-07,24 | |||
|phase1_expression=0,1.04692622291808,4.09499315450582,8.77146212789807,9.01612313903425,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14846392823004,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07940638327563,0.649776417447669,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.59857431606684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0.140271639780637,0,0.147610147979602,0.31399745568275,1.1105744752962,1.1858105083486,0,0,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0.505157755894224,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:49562541..49562577,+ | |||
}} |
Latest revision as of 14:05, 5 August 2015
Short description: | p@chr4:49562541..49562577, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:49562541..49562577, + |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.26e-26 | 6 |
gut absorptive cell | 1.26e-26 | 6 |
enterocyte | 1.26e-26 | 6 |
columnar/cuboidal epithelial cell | 6.69e-23 | 7 |
intestinal epithelial cell | 6.35e-18 | 9 |
epithelial cell of alimentary canal | 6.35e-18 | 9 |
epithelial cell | 4.69e-14 | 25 |
endodermal cell | 2.08e-12 | 20 |
endo-epithelial cell | 6.38e-11 | 15 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 6.35e-18 | 9 |
gastrointestinal system epithelium | 6.35e-18 | 9 |
intestinal epithelium | 6.35e-18 | 9 |
simple columnar epithelium | 9.52e-15 | 11 |
intestinal mucosa | 1.53e-12 | 13 |
wall of intestine | 1.53e-12 | 13 |
gastrointestinal system mucosa | 1.53e-12 | 13 |
mucosa | 6.38e-11 | 15 |
organ component layer | 6.04e-07 | 24 |