FFCP PHASE1:Mm9::chr11:120210728..120210741,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=366|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:120210728..120210741,-|id=chr11:120210728..120210741,-|ontology_enrichment_celltype=CL:0002563!3.07e-08!9;CL:0002251!3.07e-08!9|ontology_enrichment_celltype_v019_2=CL:0002563,2.75e-25,9;CL:0002251,2.75e-25,9;CL:0000066,3.44e-19,25;CL:0000223,4.86e-17,20;CL:0000239,9.82e-15,6;CL:0000677,9.82e-15,6;CL:0000584,9.82e-15,6;CL:0002076,1.03e-14,15;CL:0000075,1.33e-12,7;CL:0002250,1.77e-12,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.04e-11,3;DOID:4045,1.04e-11,3;DOID:0050686,8.63e-10,6|ontology_enrichment_uberon=UBERON:0000485!1.40e-08!11;UBERON:0003350!3.07e-08!9;UBERON:0004808!3.07e-08!9;UBERON:0001277!3.07e-08!9;UBERON:0001242!8.07e-08!13;UBERON:0000060!8.07e-08!13;UBERON:0001262!8.07e-08!13;UBERON:0004786!8.07e-08!13;UBERON:0000344!4.81e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.75e-25,9;UBERON:0004808,2.75e-25,9;UBERON:0001277,2.75e-25,9;UBERON:0000485,1.74e-20,11;UBERON:0001242,3.70e-17,13;UBERON:0001262,3.70e-17,13;UBERON:0004786,3.70e-17,13;UBERON:0000344,1.03e-14,15;UBERON:0004923,9.34e-09,24;UBERON:0000490,2.14e-08,66|phase1_expression=0.160148847104794,1.04692622291808,1.81999695755814,3.62957053568196,7.01254021924886,1.6787927191189,0.934450562382103,1.16210991097419,0.422366166455,0,0,0.159544317990673,2.05440875917447,0.262261207256992,0,0,0,0,0,0,0.17008658030214,0.297872853602656,0,0,0.22940928106717,2.29692785646008,0.86152399231815,1.72376986148711,0.190023419456374,0,0.665191531965914,1.27006134691926,0.61506478758457,0,12.1317680295535,6.31691652362271,9.18762103180661,2.51118978442145,3.906676722619,2.09409497589519,6.47054636834116,4.09827290975067,1.94204141212461,0,0.202753862439029,0,0,0,0,0.194429899074283,0,0,0,0,0.672187598284928,0,0,0,0,1.5869729378161,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0.285650984403804,0.441737081903227,0.61245399607477,0.0958454710182364,0,0,0,0,0.791317726381163,0.0914876436024097,0.52091337055676,0,0.56276261003168,0,0.294628585473668,0.284743361598206,0.372798891650601,0,0,15.0729534124872,0,3.39985666853875,0,0,0,0.280888840263504,0,0,0,0.845060518660083,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0,0,0,0,0.230615497256059,0,0.117588707135705,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0.510914110417183,0.599075622529601,0,0.508280908292259,0,0,1.50785222535437,0,0.767146371990992,0.20778804455956,0.162241263067758,0.203678727700633,0.124406970610093,0,0.631325567659422,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0,0.517406741478031,0.431135985865684,0.378212160335639,0.175951124163949,0,0,0,0,0.199034266818493,0,0.51469581422943,0,0,0.234526059981096,0.36012412292203,0.473489471170421,0.393528463494808,0.308534225774757,0.232533944750408,0,0.350296027101508,0.329119699826961,0.656669856316381,0.56748166682099,0.438599962275997,0.658650345873152,0,0,0.205809224758569,0.330418782983798,0.528901133327089,0.213288250535234,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0.494096864172033,0,0.397912944082302,0,0.898819408654221,0,0.199141273254367,0,0,0,0.203651327845314,0,0.140271639780637,0.126473074248515,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0.189491411770485,0,0.169745085775188,0,0.167506257441816,0,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,0,0.117211686592203,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0.485561272309963,0.906970670894253,1.32023555829129,0.590603785761546,0,0.258428293168221,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0.304464949114599,0,0.21183207086382,0.441056796109924,0.32977250588296,0,0.120625849856312,0.119372344003136,0,0,0,0,0,0,0,0,0,0.509935289981566,1.81936888020755,0.276399947608848,0.954670618015114,0.158167996790568,0,0.108005340821801,0.418176592028937,0.218362563746178,0.269728692769641,0.165306911450672,0.523511883968059,0,0,0,0.149516546043979,0,0.194451188344048,0,0,0.117357238645754,0.2604087696879,0.314578033277133,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.386379188064381,0.187682475451182,0.36630324853453,0,0,0.564751842617067,0,0,0.343706364687375,0,0,0,0,0.453142408984205,0,0,0,0,0,0.209613162627982,0.183843508450014,0.44449345560323,0.412070114477788,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0,0.147198920134397,0,0.354951612318675,0,0.436039249896986,0,0.169229215783353,0,0,0,0,0.237270036248348,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.499621155875892,0,0,0.191288332068843,0.220591419119515,0|short_description=p@chr11:120210728..120210741,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=366 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:120210728..120210741,- | |||
|description=CAGE_peak_at_chr11:120210728..120210741,- | |||
|id=chr11:120210728..120210741,- | |||
|ontology_enrichment_celltype=CL:0002563!3.07e-08!9;CL:0002251!3.07e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.75e-25,9;CL:0002251,2.75e-25,9;CL:0000066,3.44e-19,25;CL:0000223,4.86e-17,20;CL:0000239,9.82e-15,6;CL:0000677,9.82e-15,6;CL:0000584,9.82e-15,6;CL:0002076,1.03e-14,15;CL:0000075,1.33e-12,7;CL:0002250,1.77e-12,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.04e-11,3;DOID:4045,1.04e-11,3;DOID:0050686,8.63e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0000485!1.40e-08!11;UBERON:0003350!3.07e-08!9;UBERON:0004808!3.07e-08!9;UBERON:0001277!3.07e-08!9;UBERON:0001242!8.07e-08!13;UBERON:0000060!8.07e-08!13;UBERON:0001262!8.07e-08!13;UBERON:0004786!8.07e-08!13;UBERON:0000344!4.81e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.75e-25,9;UBERON:0004808,2.75e-25,9;UBERON:0001277,2.75e-25,9;UBERON:0000485,1.74e-20,11;UBERON:0001242,3.70e-17,13;UBERON:0001262,3.70e-17,13;UBERON:0004786,3.70e-17,13;UBERON:0000344,1.03e-14,15;UBERON:0004923,9.34e-09,24;UBERON:0000490,2.14e-08,66 | |||
|phase1_expression=0.160148847104794,1.04692622291808,1.81999695755814,3.62957053568196,7.01254021924886,1.6787927191189,0.934450562382103,1.16210991097419,0.422366166455,0,0,0.159544317990673,2.05440875917447,0.262261207256992,0,0,0,0,0,0,0.17008658030214,0.297872853602656,0,0,0.22940928106717,2.29692785646008,0.86152399231815,1.72376986148711,0.190023419456374,0,0.665191531965914,1.27006134691926,0.61506478758457,0,12.1317680295535,6.31691652362271,9.18762103180661,2.51118978442145,3.906676722619,2.09409497589519,6.47054636834116,4.09827290975067,1.94204141212461,0,0.202753862439029,0,0,0,0,0.194429899074283,0,0,0,0,0.672187598284928,0,0,0,0,1.5869729378161,0,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0.285650984403804,0.441737081903227,0.61245399607477,0.0958454710182364,0,0,0,0,0.791317726381163,0.0914876436024097,0.52091337055676,0,0.56276261003168,0,0.294628585473668,0.284743361598206,0.372798891650601,0,0,15.0729534124872,0,3.39985666853875,0,0,0,0.280888840263504,0,0,0,0.845060518660083,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0,0,0,0,0.230615497256059,0,0.117588707135705,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0.510914110417183,0.599075622529601,0,0.508280908292259,0,0,1.50785222535437,0,0.767146371990992,0.20778804455956,0.162241263067758,0.203678727700633,0.124406970610093,0,0.631325567659422,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0,0.517406741478031,0.431135985865684,0.378212160335639,0.175951124163949,0,0,0,0,0.199034266818493,0,0.51469581422943,0,0,0.234526059981096,0.36012412292203,0.473489471170421,0.393528463494808,0.308534225774757,0.232533944750408,0,0.350296027101508,0.329119699826961,0.656669856316381,0.56748166682099,0.438599962275997,0.658650345873152,0,0,0.205809224758569,0.330418782983798,0.528901133327089,0.213288250535234,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0.494096864172033,0,0.397912944082302,0,0.898819408654221,0,0.199141273254367,0,0,0,0.203651327845314,0,0.140271639780637,0.126473074248515,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0.189491411770485,0,0.169745085775188,0,0.167506257441816,0,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0,0,0.117211686592203,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0.485561272309963,0.906970670894253,1.32023555829129,0.590603785761546,0,0.258428293168221,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0.304464949114599,0,0.21183207086382,0.441056796109924,0.32977250588296,0,0.120625849856312,0.119372344003136,0,0,0,0,0,0,0,0,0,0.509935289981566,1.81936888020755,0.276399947608848,0.954670618015114,0.158167996790568,0,0.108005340821801,0.418176592028937,0.218362563746178,0.269728692769641,0.165306911450672,0.523511883968059,0,0,0,0.149516546043979,0,0.194451188344048,0,0,0.117357238645754,0.2604087696879,0.314578033277133,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.386379188064381,0.187682475451182,0.36630324853453,0,0,0.564751842617067,0,0,0.343706364687375,0,0,0,0,0.453142408984205,0,0,0,0,0,0.209613162627982,0.183843508450014,0.44449345560323,0.412070114477788,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0,0.147198920134397,0,0.354951612318675,0,0.436039249896986,0,0.169229215783353,0,0,0,0,0.237270036248348,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.499621155875892,0,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p@chr11:120210728..120210741,- | |||
}} |
Latest revision as of 14:54, 5 August 2015
Short description: | p@chr11:120210728..120210741, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:120210728..120210741, - |
Coexpression cluster: | MCL_coexpression_mm9:366 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.75e-25 | 9 |
epithelial cell of alimentary canal | 2.75e-25 | 9 |
epithelial cell | 3.44e-19 | 25 |
endodermal cell | 4.86e-17 | 20 |
brush border epithelial cell | 9.82e-15 | 6 |
gut absorptive cell | 9.82e-15 | 6 |
enterocyte | 9.82e-15 | 6 |
endo-epithelial cell | 1.03e-14 | 15 |
columnar/cuboidal epithelial cell | 1.33e-12 | 7 |
intestinal crypt stem cell | 1.77e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 2.75e-25 | 9 |
gastrointestinal system epithelium | 2.75e-25 | 9 |
intestinal epithelium | 2.75e-25 | 9 |
simple columnar epithelium | 1.74e-20 | 11 |
intestinal mucosa | 3.70e-17 | 13 |
wall of intestine | 3.70e-17 | 13 |
gastrointestinal system mucosa | 3.70e-17 | 13 |
mucosa | 1.03e-14 | 15 |
organ component layer | 9.34e-09 | 24 |
unilaminar epithelium | 2.14e-08 | 66 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.04e-11 | 3 |
muscle cancer | 1.04e-11 | 3 |
organ system cancer | 8.63e-10 | 6 |