Personal tools

FFCP PHASE1:Mm9::chr1:37722539..37722560,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=1365
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr1:37722539..37722560,-
|description=CAGE_peak_at_chr1:37722539..37722560,-
|description=CAGE_peak_at_chr1:37722539..37722560,-
|id=chr1:37722539..37722560,-
|id=chr1:37722539..37722560,-
|ontology_enrichment_celltype=CL:0002563!4.40e-09!9;CL:0002251!4.40e-09!9;CL:0002076!1.52e-07!15;CL:0000066!7.23e-07!25
|ontology_enrichment_celltype=CL:0002563!4.40e-09!9;CL:0002251!4.40e-09!9;CL:0002076!1.52e-07!15;CL:0000066!7.23e-07!25
|ontology_enrichment_celltype_v019_2=CL:0002563,4.38e-13,9;CL:0002251,4.38e-13,9;CL:0002076,5.13e-10,15;CL:0000239,3.07e-09,6;CL:0000677,3.07e-09,6;CL:0000584,3.07e-09,6;CL:0000066,2.13e-08,25;CL:0000075,9.21e-08,7;CL:0000223,7.99e-07,20
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!1.48e-19!59;UBERON:0000160!9.10e-17!43;UBERON:0001007!1.99e-14!128;UBERON:0001555!1.99e-14!128;UBERON:0007026!1.99e-14!128;UBERON:0000344!4.40e-14!15;UBERON:0004119!7.31e-14!130;UBERON:0000925!7.31e-14!130;UBERON:0006595!7.31e-14!130;UBERON:0004921!2.67e-13!126;UBERON:0004185!2.67e-13!126;UBERON:0001242!1.19e-12!13;UBERON:0000060!1.19e-12!13;UBERON:0001262!1.19e-12!13;UBERON:0004786!1.19e-12!13;UBERON:0005178!1.56e-09!17;UBERON:0005181!1.56e-09!17;UBERON:0002224!1.56e-09!17;UBERON:0000915!1.56e-09!17;UBERON:0008947!1.56e-09!17;UBERON:0003258!1.56e-09!17;UBERON:0003350!4.40e-09!9;UBERON:0004808!4.40e-09!9;UBERON:0001277!4.40e-09!9;UBERON:0002048!5.37e-08!14;UBERON:0000117!5.37e-08!14;UBERON:0000171!5.37e-08!14;UBERON:0000170!5.37e-08!14;UBERON:0005597!5.37e-08!14;UBERON:0000118!5.37e-08!14;UBERON:0000485!6.47e-08!11;UBERON:0004923!2.24e-07!24
|ontology_enrichment_uberon=UBERON:0005409!1.48e-19!59;UBERON:0000160!9.10e-17!43;UBERON:0001007!1.99e-14!128;UBERON:0001555!1.99e-14!128;UBERON:0007026!1.99e-14!128;UBERON:0000344!4.40e-14!15;UBERON:0004119!7.31e-14!130;UBERON:0000925!7.31e-14!130;UBERON:0006595!7.31e-14!130;UBERON:0004921!2.67e-13!126;UBERON:0004185!2.67e-13!126;UBERON:0001242!1.19e-12!13;UBERON:0000060!1.19e-12!13;UBERON:0001262!1.19e-12!13;UBERON:0004786!1.19e-12!13;UBERON:0005178!1.56e-09!17;UBERON:0005181!1.56e-09!17;UBERON:0002224!1.56e-09!17;UBERON:0000915!1.56e-09!17;UBERON:0008947!1.56e-09!17;UBERON:0003258!1.56e-09!17;UBERON:0003350!4.40e-09!9;UBERON:0004808!4.40e-09!9;UBERON:0001277!4.40e-09!9;UBERON:0002048!5.37e-08!14;UBERON:0000117!5.37e-08!14;UBERON:0000171!5.37e-08!14;UBERON:0000170!5.37e-08!14;UBERON:0005597!5.37e-08!14;UBERON:0000118!5.37e-08!14;UBERON:0000485!6.47e-08!11;UBERON:0004923!2.24e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.17e-38,47;UBERON:0000160,1.82e-36,31;UBERON:0001007,5.37e-27,116;UBERON:0001555,5.37e-27,116;UBERON:0007026,5.37e-27,116;UBERON:0004119,2.76e-26,118;UBERON:0000925,2.76e-26,118;UBERON:0006595,2.76e-26,118;UBERON:0004921,4.88e-25,114;UBERON:0000344,9.43e-21,15;UBERON:0001242,1.48e-18,13;UBERON:0001262,1.48e-18,13;UBERON:0004786,1.48e-18,13;UBERON:0003350,4.38e-13,9;UBERON:0004808,4.38e-13,9;UBERON:0001277,4.38e-13,9;UBERON:0004923,2.86e-11,24;UBERON:0005178,6.80e-11,17;UBERON:0005181,6.80e-11,17;UBERON:0002224,6.80e-11,17;UBERON:0000915,6.80e-11,17;UBERON:0008947,6.80e-11,17;UBERON:0003258,6.80e-11,17;UBERON:0000485,2.75e-10,11;UBERON:0002048,4.34e-10,14;UBERON:0000117,4.34e-10,14;UBERON:0000171,4.34e-10,14;UBERON:0000170,4.34e-10,14;UBERON:0005597,4.34e-10,14;UBERON:0000118,4.34e-10,14;UBERON:0011216,8.42e-09,194;UBERON:0005153,7.72e-08,17;UBERON:0002108,5.51e-07,4
|phase1_expression=0.160148847104794,2.79180326111489,3.18499467572675,8.46899791659124,11.0197060588196,7.72244650794693,7.00837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,1.48936426801328,1.04479915655574,3.19984845586813,4.5881856213434,1.72269589234506,5.59990595006797,5.60225204983311,12.5415456841207,10.0812051903972,3.54768817048488,0,0,0,6.35473563452804,4.15586613396231,8.5751129630195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0.865964164044856,1.52015919285059,2.52762222507392,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9113408974498,0,0,7.15279754584056,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0.631325567659422,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.93879444265976,5.55346189993443,0,0,2.19074684247559,2.62188582010345,3.7804267453628,4.75564065281398,8.0669940462567,6.25856027951241,6.53471542880701,8.75408476981064,5.06906626509712,3.59527763461689,5.40345124686736,7.36822711041159,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,5.91210208533135,0,1.62964976442026,1.35796068620151,1.87752198630802,2.1775813467436,3.09456733151818,1.36593553500459,1.89162172927429,0.8858587585951,2.07291199254733,2.45794972073607,2.07221978239075,2.89298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0.425820255624806,0,0,1.31976098378028,0,0.242780636154981,0,0.188605079755898,0,0,2.06742634534577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120625849856312,0,0.164140899745061,6.99554007911642,0,0,0,0.185194527369712,0,0,0,0,0,0,4.77335309007557,0,1.82987520414164,2.80813886136683,4.18176592028937,4.36725127492355,4.72025212346872,3.14083131756277,5.49687478166462,5.18459893167171,6.83473244395618,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0.358053391334963,0,0,0,0,0,0,0,0,0,10.2028672626845,0,0,0,0,0.187682475451182,2.93042598827624,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,1.28367683836726,0.252697211763798,0.760437899670719,0.943131706930381,0.37456602987953,0.576226371643824,0.402048282689293,0,0.231768651889711,0.192909220463705,0,0.883193520806384,1.02860775715625,0.354951612318675,0.238436189947321,0.726732083161643,0.846984423737976,0.761531471025089,1.09756783723664,0,0.679020569229309,0.561142271657738,0.355905054372522,0.29551344712669,0,0.309873682371932,0.964533054905707,0,0.935726433781634,0.429742108096597,0,0.220591419119515,0.463735671240843
|phase1_expression=0.160148847104794,2.79180326111489,3.18499467572675,8.46899791659124,11.0197060588196,7.72244650794693,7.00837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,1.48936426801328,1.04479915655574,3.19984845586813,4.5881856213434,1.72269589234506,5.59990595006797,5.60225204983311,12.5415456841207,10.0812051903972,3.54768817048488,0,0,0,6.35473563452804,4.15586613396231,8.5751129630195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0.865964164044856,1.52015919285059,2.52762222507392,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9113408974498,0,0,7.15279754584056,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0.631325567659422,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.93879444265976,5.55346189993443,0,0,2.19074684247559,2.62188582010345,3.7804267453628,4.75564065281398,8.0669940462567,6.25856027951241,6.53471542880701,8.75408476981064,5.06906626509712,3.59527763461689,5.40345124686736,7.36822711041159,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,5.91210208533135,0,1.62964976442026,1.35796068620151,1.87752198630802,2.1775813467436,3.09456733151818,1.36593553500459,1.89162172927429,0.8858587585951,2.07291199254733,2.45794972073607,2.07221978239075,2.89298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0.425820255624806,0,0,1.31976098378028,0,0.242780636154981,0,0.188605079755898,0,0,2.06742634534577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120625849856312,0,0.164140899745061,6.99554007911642,0,0,0,0.185194527369712,0,0,0,0,0,0,4.77335309007557,0,1.82987520414164,2.80813886136683,4.18176592028937,4.36725127492355,4.72025212346872,3.14083131756277,5.49687478166462,5.18459893167171,6.83473244395618,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0.358053391334963,0,0,0,0,0,0,0,0,0,10.2028672626845,0,0,0,0,0.187682475451182,2.93042598827624,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,1.28367683836726,0.252697211763798,0.760437899670719,0.943131706930381,0.37456602987953,0.576226371643824,0.402048282689293,0,0.231768651889711,0.192909220463705,0,0.883193520806384,1.02860775715625,0.354951612318675,0.238436189947321,0.726732083161643,0.846984423737976,0.761531471025089,1.09756783723664,0,0.679020569229309,0.561142271657738,0.355905054372522,0.29551344712669,0,0.309873682371932,0.964533054905707,0,0.935726433781634,0.429742108096597,0,0.220591419119515,0.463735671240843
|short_description=p@chr1:37722539..37722560,-
|short_description=p@chr1:37722539..37722560,-
}}
}}

Latest revision as of 15:09, 5 August 2015

Short description:p@chr1:37722539..37722560, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr1:37722539..37722560, -
Coexpression cluster:MCL_coexpression_mm9:1365
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0.0
2.5
5.0
7.5
10.0
12.5
15.0
17.5




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:37722539..37722560,-&oldid=3912937"