FFCP PHASE1:Mm9::chr4:6292843..6292867,+: Difference between revisions
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{{FFCP|EntrezGene=53378|HGNC=|MCL_coexpression_id=359|UniProt=A2AKJ4,A2AKJ9,A2AKJ5|association_with_transcript=0bp_to_ENSMUST00000108371,ENSMUST00000108374,ENSMUST00000140830,ENSMUST00000155247_5end|description=CAGE_peak_1_at_Sdcbp_5end|id=chr4:6292843..6292867,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!4.97e-09!59;UBERON:0004119!1.09e-08!130;UBERON:0000925!1.09e-08!130;UBERON:0006595!1.09e-08!130;UBERON:0001007!3.05e-08!128;UBERON:0001555!3.05e-08!128;UBERON:0007026!3.05e-08!128;UBERON:0004921!1.39e-07!126;UBERON:0004185!1.39e-07!126;UBERON:0000926!5.03e-07!193;UBERON:0004120!5.03e-07!193;UBERON:0006603!5.03e-07!193;UBERON:0004923!6.55e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.00e-11,47;UBERON:0004119,1.72e-09,118;UBERON:0000925,1.72e-09,118;UBERON:0006595,1.72e-09,118;UBERON:0001007,5.01e-09,116;UBERON:0001555,5.01e-09,116;UBERON:0007026,5.01e-09,116;UBERON:0000160,1.91e-08,31;UBERON:0004921,2.51e-08,114;UBERON:0002100,4.29e-07,90;UBERON:0004923,6.55e-07,24|phase1_expression=107.139578713107,115.510859928629,107.83481973532,93.1589770825037,95.6710844197523,81.2535676053547,87.3711275827266,73.8585410085816,151.911031201648,106.733424002829,56.6731474826422,28.8775215563118,86.4563686152589,91.3543205278523,126.914819251767,187.897048137758,264.434389932439,95.4273050208669,87.8903519412786,103.551075038719,69.9055845041794,75.1632500590702,91.6811259877663,155.192650109604,166.321728773698,134.370279602915,129.228598847722,124.973314957816,278.194286084131,167.600036290354,148.115981117744,24.131165591466,9.22597181376855,0,99.6538088141897,114.868139942718,94.5304119494769,559.158258664509,509.430644629518,549.176407428514,617.054830944534,534.141569237505,526.293222685771,92.4082643940737,93.6722844468315,107.558396766745,39.119567217402,28.7793206422189,75.5720468606583,63.9674367954392,48.9952475688769,10.062679505548,123.487998058494,94.2970784614748,96.1228265547447,131.459571814369,105.157772457524,106.228451009153,24.0756588422921,20.1016572123373,12.0427966666174,54.5539696631303,31.1253178638899,130.485459005803,102.842101706965,113.676818391376,45.5392167987975,29.9690278150813,36.6024331448926,27.94622923466,32.6003690094642,19.7099179238624,24.2955395046775,30.2552274060936,28.6577958344527,21.1420320920305,57.2602581196821,66.652790480468,79.7217907599904,24.6627358055462,23.2378614750121,29.1711487511786,77.3336907233825,82.726103674657,94.5821153738455,31.5252586456824,37.5861237309632,29.2647129945722,217.182722479572,220.139954591066,148.990347192662,110.134256253617,79.5566460438068,41.0174425644741,29.8897152025928,38.0822854032735,77.8062087529905,102.939914837147,84.6902375005352,92.5749685217091,79.4356887540478,44.9142670950112,20.3844191765317,7.11066703153331,156.95600473313,154.54951793981,131.941880148858,80.7280029613754,102.280464040633,130.332198098916,90.2123699183906,109.607572192371,122.456829042967,177.551270570989,115.001755578719,130.190588617544,139.912351737656,105.412931194616,147.729962175629,74.8980515256504,109.095710119434,96.4901753739092,100.651551057786,85.4919927273718,104.095013286287,164.514343554333,156.358737480226,132.578503549543,164.810084513765,66.9564158139557,64.0500843946077,22.7434377324285,76.8303495249862,83.6189545470181,62.5442014124276,66.1944353316451,104.894544765826,106.98999472468,99.0673213060005,107.956672069761,63.3686557228367,87.3627996847197,65.1824909895364,70.5298547471146,51.2314838609499,61.7508131772976,54.7218071428816,54.5864112259323,47.4249584452253,61.2703699743734,57.7119687257752,56.3333032338867,69.7898595556251,66.864415972256,62.5577694680148,81.4050151287637,140.442637462647,108.858164709525,155.153270669994,61.3092286705086,75.7519173738941,78.5070587970025,76.7052943296081,78.5089284672141,88.5493227973551,90.9207723974095,78.0675598072892,97.2655301918522,84.254643155702,100.798822944564,68.3410064471564,92.836992015086,86.722295539965,99.8495755577166,115.238891813142,56.2888229714686,342.644277954199,127.729623698492,61.4270161541474,58.2914046369701,70.2327664205409,108.707419771982,151.439447858357,251.858728973028,202.149380217962,261.377241147005,312.660999747535,307.387749303578,281.33317771289,149.204021836601,206.195699580458,221.445095858856,42.1062740115841,69.4630956667151,49.5914036961554,68.019543500335,68.4652279701719,86.968416663995,100.799040176066,93.4372236710882,120.418024254334,122.533383774348,63.1444095695627,97.604386843915,105.159062385564,122.549851249745,121.107492468936,136.988626739373,150.993130106382,87.7473219224972,89.8229156333696,115.86491636537,109.263836960789,93.7795188124629,84.5622094140459,69.2066125575086,52.7428395754422,75.7436328540486,142.629462808619,70.4908051786203,69.7490099171871,65.861093280773,79.5599941698022,86.0982163250933,94.7413690726335,110.445644687514,108.925884577378,117.376285513851,103.486144858709,15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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:53378 | |||
|HGNC= | |||
|MCL_coexpression_id=359 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2AKJ4,uniprot:A2AKJ9,uniprot:A2AKJ5 | |||
|association_with_transcript=0bp_to_ENSMUST00000108371,ENSMUST00000108374,ENSMUST00000140830,ENSMUST00000155247_5end | |||
|cluster_id=chr4:6292843..6292867,+ | |||
|description=CAGE_peak_1_at_Sdcbp_5end | |||
|id=chr4:6292843..6292867,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.97e-09!59;UBERON:0004119!1.09e-08!130;UBERON:0000925!1.09e-08!130;UBERON:0006595!1.09e-08!130;UBERON:0001007!3.05e-08!128;UBERON:0001555!3.05e-08!128;UBERON:0007026!3.05e-08!128;UBERON:0004921!1.39e-07!126;UBERON:0004185!1.39e-07!126;UBERON:0000926!5.03e-07!193;UBERON:0004120!5.03e-07!193;UBERON:0006603!5.03e-07!193;UBERON:0004923!6.55e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.00e-11,47;UBERON:0004119,1.72e-09,118;UBERON:0000925,1.72e-09,118;UBERON:0006595,1.72e-09,118;UBERON:0001007,5.01e-09,116;UBERON:0001555,5.01e-09,116;UBERON:0007026,5.01e-09,116;UBERON:0000160,1.91e-08,31;UBERON:0004921,2.51e-08,114;UBERON:0002100,4.29e-07,90;UBERON:0004923,6.55e-07,24 | |||
|phase1_expression=107.139578713107,115.510859928629,107.83481973532,93.1589770825037,95.6710844197523,81.2535676053547,87.3711275827266,73.8585410085816,151.911031201648,106.733424002829,56.6731474826422,28.8775215563118,86.4563686152589,91.3543205278523,126.914819251767,187.897048137758,264.434389932439,95.4273050208669,87.8903519412786,103.551075038719,69.9055845041794,75.1632500590702,91.6811259877663,155.192650109604,166.321728773698,134.370279602915,129.228598847722,124.973314957816,278.194286084131,167.600036290354,148.115981117744,24.131165591466,9.22597181376855,0,99.6538088141897,114.868139942718,94.5304119494769,559.158258664509,509.430644629518,549.176407428514,617.054830944534,534.141569237505,526.293222685771,92.4082643940737,93.6722844468315,107.558396766745,39.119567217402,28.7793206422189,75.5720468606583,63.9674367954392,48.9952475688769,10.062679505548,123.487998058494,94.2970784614748,96.1228265547447,131.459571814369,105.157772457524,106.228451009153,24.0756588422921,20.1016572123373,12.0427966666174,54.5539696631303,31.1253178638899,130.485459005803,102.842101706965,113.676818391376,45.5392167987975,29.9690278150813,36.6024331448926,27.94622923466,32.6003690094642,19.7099179238624,24.2955395046775,30.2552274060936,28.6577958344527,21.1420320920305,57.2602581196821,66.652790480468,79.7217907599904,24.6627358055462,23.2378614750121,29.1711487511786,77.3336907233825,82.726103674657,94.5821153738455,31.5252586456824,37.5861237309632,29.2647129945722,217.182722479572,220.139954591066,148.990347192662,110.134256253617,79.5566460438068,41.0174425644741,29.8897152025928,38.0822854032735,77.8062087529905,102.939914837147,84.6902375005352,92.5749685217091,79.4356887540478,44.9142670950112,20.3844191765317,7.11066703153331,156.95600473313,154.54951793981,131.941880148858,80.7280029613754,102.280464040633,130.332198098916,90.2123699183906,109.607572192371,122.456829042967,177.551270570989,115.001755578719,130.190588617544,139.912351737656,105.412931194616,147.729962175629,74.8980515256504,109.095710119434,96.4901753739092,100.651551057786,85.4919927273718,104.095013286287,164.514343554333,156.358737480226,132.578503549543,164.810084513765,66.9564158139557,64.0500843946077,22.7434377324285,76.8303495249862,83.6189545470181,62.5442014124276,66.1944353316451,104.894544765826,106.98999472468,99.0673213060005,107.956672069761,63.3686557228367,87.3627996847197,65.1824909895364,70.5298547471146,51.2314838609499,61.7508131772976,54.7218071428816,54.5864112259323,47.4249584452253,61.2703699743734,57.7119687257752,56.3333032338867,69.7898595556251,66.864415972256,62.5577694680148,81.4050151287637,140.442637462647,108.858164709525,155.153270669994,61.3092286705086,75.7519173738941,78.5070587970025,76.7052943296081,78.5089284672141,88.5493227973551,90.9207723974095,78.0675598072892,97.2655301918522,84.254643155702,100.798822944564,68.3410064471564,92.836992015086,86.722295539965,99.8495755577166,115.238891813142,56.2888229714686,342.644277954199,127.729623698492,61.4270161541474,58.2914046369701,70.2327664205409,108.707419771982,151.439447858357,251.858728973028,202.149380217962,261.377241147005,312.660999747535,307.387749303578,281.33317771289,149.204021836601,206.195699580458,221.445095858856,42.1062740115841,69.4630956667151,49.5914036961554,68.019543500335,68.4652279701719,86.968416663995,100.799040176066,93.4372236710882,120.418024254334,122.533383774348,63.1444095695627,97.604386843915,105.159062385564,122.549851249745,121.107492468936,136.988626739373,150.993130106382,87.7473219224972,89.8229156333696,115.86491636537,109.263836960789,93.7795188124629,84.5622094140459,69.2066125575086,52.7428395754422,75.7436328540486,142.629462808619,70.4908051786203,69.7490099171871,65.861093280773,79.5599941698022,86.0982163250933,94.7413690726335,110.445644687514,108.925884577378,117.376285513851,103.486144858709,152.556746000352,178.556271249336,179.654130758237,468.960893051137,381.277884356915,148.512810451749,126.930903300177,94.2431963228339,91.4251155419185,73.7707254195039,59.583138820232,87.0802685588868,75.7451163935479,76.9061529906092,78.3817657284371,86.2230868698865,54.9168469730335,99.1786219103491,105.796620563895,89.7303255938608,60.0870861708779,101.203280753496,64.4597485275464,109.78581060431,110.859922637544,53.0980553359851,49.7700304117712,48.3717691143602,82.4204198533275,48.4295104324467,90.3859334955147,131.540001222625,106.878916466387,105.523224001878,94.8110273807448,92.7683755459989,72.1948802737308,84.7694618326932,54.0183282093931,31.3048014754266,71.1598956304886,84.4139512137222,65.2829872423578,78.4898828272117,54.1947609423987,112.877091578645,120.32061625065,112.028426211921,33.9665681059449,77.6643892407306,57.4179045316044,53.0013207373926,43.1690566329511,204.036585640896,87.8915931529816,130.203611167964,83.1739077891787,141.30342438309,177.06634958441,127.809102919159,173.185077117338,227.771096191766,220.423537409761,211.584159894573,140.336580848222,43.9707031077778,79.0912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| |||
|short_description=p1@Sdcbp | |||
}} |
Revision as of 16:29, 5 August 2015
Short description: | p1@Sdcbp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sdcbp_5end |
Coexpression cluster: | MCL_coexpression_mm9:359 |
Association with transcript: | 0bp_to_ENSMUST00000108371, ENSMUST00000108374, ENSMUST00000140830, ENSMUST00000155247_5end |
EntrezGene: | 53378 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.00e-11 | 47 |
endoderm-derived structure | 1.72e-09 | 118 |
endoderm | 1.72e-09 | 118 |
presumptive endoderm | 1.72e-09 | 118 |
digestive system | 5.01e-09 | 116 |
digestive tract | 5.01e-09 | 116 |
primitive gut | 5.01e-09 | 116 |
intestine | 1.91e-08 | 31 |
subdivision of digestive tract | 2.51e-08 | 114 |
trunk | 4.29e-07 | 90 |
organ component layer | 6.55e-07 | 24 |