FFCP PHASE1:Mm9::chr3:102586631..102586638,-: Difference between revisions
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{{FFCP|EntrezGene=22094|HGNC=|MCL_coexpression_id=248|UniProt=E9Q4F3,Q14AI3|association_with_transcript=0bp_to_ENSMUST00000029450,ENSMUST00000170856,ENSMUST00000172026,NM_001165939,NM_001165940,NM_009432,uc008qrx.1,uc008qry.2,uc012cva.1,uc012cvb.1_5end|description=CAGE_peak_2_at_Tshb_5end|id=chr3:102586631..102586638,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000007!7.40e-76!8;UBERON:0003296!7.40e-76!8;UBERON:0010133!7.40e-76!8;UBERON:0001894!8.33e-61!10;UBERON:0006222!8.33e-61!10;UBERON:0002780!7.07e-16!39;UBERON:0001890!7.07e-16!39;UBERON:0006240!7.07e-16!39;UBERON:0003080!1.74e-15!40;UBERON:0002616!1.11e-12!49;UBERON:0003056!1.11e-12!49;UBERON:0000955!1.96e-12!50;UBERON:0006238!1.96e-12!50;UBERON:0001049!5.81e-12!52;UBERON:0005068!5.81e-12!52;UBERON:0006241!5.81e-12!52;UBERON:0007135!5.81e-12!52;UBERON:0002368!2.18e-10!60;UBERON:0000033!6.70e-10!63;UBERON:0002530!1.34e-09!65;UBERON:0002346!8.49e-09!71;UBERON:0003075!8.49e-09!71;UBERON:0007284!8.49e-09!71;UBERON:0000949!1.12e-08!72;UBERON:0001017!1.47e-08!73;UBERON:0005743!1.47e-08!73;UBERON:0000073!2.47e-08!75;UBERON:0001016!2.47e-08!75;UBERON:0007811!2.83e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.66e-54,8;UBERON:0003296,1.66e-54,8;UBERON:0010133,1.66e-54,8;UBERON:0001894,8.43e-44,10;UBERON:0006222,8.43e-44,10;UBERON:0002780,8.52e-12,39;UBERON:0001890,8.52e-12,39;UBERON:0006240,8.52e-12,39;UBERON:0003080,1.62e-11,40;UBERON:0002616,4.29e-10,46;UBERON:0000955,6.83e-10,47;UBERON:0006238,6.83e-10,47;UBERON:0003056,1.64e-09,49;UBERON:0001049,5.37e-09,52;UBERON:0005068,5.37e-09,52;UBERON:0006241,5.37e-09,52;UBERON:0007135,5.37e-09,52;UBERON:0000073,1.10e-08,54;UBERON:0002368,7.20e-08,60;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64;UBERON:0002530,2.65e-07,65|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.17055053809091,0,0.129358683782755,0.214337035031592,2.83744373827638,4.45922044005176,4.60737257685939,7.61162372786498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@Tshb}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22094 | |||
|HGNC= | |||
|MCL_coexpression_id=248 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q4F3,uniprot:Q14AI3 | |||
|association_with_transcript=0bp_to_ENSMUST00000029450,ENSMUST00000170856,ENSMUST00000172026,NM_001165939,NM_001165940,NM_009432,uc008qrx.1,uc008qry.2,uc012cva.1,uc012cvb.1_5end | |||
|cluster_id=chr3:102586631..102586638,- | |||
|description=CAGE_peak_2_at_Tshb_5end | |||
|id=chr3:102586631..102586638,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!7.40e-76!8;UBERON:0003296!7.40e-76!8;UBERON:0010133!7.40e-76!8;UBERON:0001894!8.33e-61!10;UBERON:0006222!8.33e-61!10;UBERON:0002780!7.07e-16!39;UBERON:0001890!7.07e-16!39;UBERON:0006240!7.07e-16!39;UBERON:0003080!1.74e-15!40;UBERON:0002616!1.11e-12!49;UBERON:0003056!1.11e-12!49;UBERON:0000955!1.96e-12!50;UBERON:0006238!1.96e-12!50;UBERON:0001049!5.81e-12!52;UBERON:0005068!5.81e-12!52;UBERON:0006241!5.81e-12!52;UBERON:0007135!5.81e-12!52;UBERON:0002368!2.18e-10!60;UBERON:0000033!6.70e-10!63;UBERON:0002530!1.34e-09!65;UBERON:0002346!8.49e-09!71;UBERON:0003075!8.49e-09!71;UBERON:0007284!8.49e-09!71;UBERON:0000949!1.12e-08!72;UBERON:0001017!1.47e-08!73;UBERON:0005743!1.47e-08!73;UBERON:0000073!2.47e-08!75;UBERON:0001016!2.47e-08!75;UBERON:0007811!2.83e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.66e-54,8;UBERON:0003296,1.66e-54,8;UBERON:0010133,1.66e-54,8;UBERON:0001894,8.43e-44,10;UBERON:0006222,8.43e-44,10;UBERON:0002780,8.52e-12,39;UBERON:0001890,8.52e-12,39;UBERON:0006240,8.52e-12,39;UBERON:0003080,1.62e-11,40;UBERON:0002616,4.29e-10,46;UBERON:0000955,6.83e-10,47;UBERON:0006238,6.83e-10,47;UBERON:0003056,1.64e-09,49;UBERON:0001049,5.37e-09,52;UBERON:0005068,5.37e-09,52;UBERON:0006241,5.37e-09,52;UBERON:0007135,5.37e-09,52;UBERON:0000073,1.10e-08,54;UBERON:0002368,7.20e-08,60;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64;UBERON:0002530,2.65e-07,65 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.17055053809091,0,0.129358683782755,0.214337035031592,2.83744373827638,4.45922044005176,4.60737257685939,7.61162372786498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@Tshb | |||
}} |
Revision as of 18:10, 5 August 2015
Short description: | p2@Tshb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tshb_5end |
Coexpression cluster: | MCL_coexpression_mm9:248 |
Association with transcript: | 0bp_to_ENSMUST00000029450, ENSMUST00000170856, ENSMUST00000172026, NM_001165939, NM_001165940, NM_009432, uc008qrx.1, uc008qry.2, uc012cva.1, uc012cvb.1_5end |
EntrezGene: | 22094 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.66e-54 | 8 |
gland of diencephalon | 1.66e-54 | 8 |
neuroendocrine gland | 1.66e-54 | 8 |
diencephalon | 8.43e-44 | 10 |
future diencephalon | 8.43e-44 | 10 |
regional part of forebrain | 8.52e-12 | 39 |
forebrain | 8.52e-12 | 39 |
future forebrain | 8.52e-12 | 39 |
anterior neural tube | 1.62e-11 | 40 |
regional part of brain | 4.29e-10 | 46 |
brain | 6.83e-10 | 47 |
future brain | 6.83e-10 | 47 |
pre-chordal neural plate | 1.64e-09 | 49 |
neural tube | 5.37e-09 | 52 |
neural rod | 5.37e-09 | 52 |
future spinal cord | 5.37e-09 | 52 |
neural keel | 5.37e-09 | 52 |
regional part of nervous system | 1.10e-08 | 54 |
endocrine gland | 7.20e-08 | 60 |
neurectoderm | 2.08e-07 | 64 |
neural plate | 2.08e-07 | 64 |
presumptive neural plate | 2.08e-07 | 64 |
gland | 2.65e-07 | 65 |