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FFCP PHASE1:Mm9::chr4:83131749..83131794,-: Difference between revisions

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{{FFCP|EntrezGene=101739|HGNC=|MCL_coexpression_id=60|UniProt=F6RB63|association_with_transcript=287bp_to_ENSMUST00000130626_5end|description=CAGE_peak_3_at_Psip1_5end|id=chr4:83131749..83131794,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.59e-14!71;UBERON:0003075!4.59e-14!71;UBERON:0007284!4.59e-14!71;UBERON:0007811!8.21e-14!86;UBERON:0000033!2.44e-13!63;UBERON:0000153!5.53e-13!94;UBERON:0003056!7.68e-12!49;UBERON:0000955!9.50e-12!50;UBERON:0006238!9.50e-12!50;UBERON:0002616!2.51e-11!49;UBERON:0001049!8.64e-11!52;UBERON:0005068!8.64e-11!52;UBERON:0006241!8.64e-11!52;UBERON:0007135!8.64e-11!52;UBERON:0000073!1.92e-09!75;UBERON:0001016!1.92e-09!75;UBERON:0001017!2.81e-09!73;UBERON:0005743!2.81e-09!73;UBERON:0004121!1.15e-08!102;UBERON:0000924!1.15e-08!102;UBERON:0006601!1.15e-08!102;UBERON:0003080!3.63e-08!40;UBERON:0002780!9.69e-08!39;UBERON:0001890!9.69e-08!39;UBERON:0006240!9.69e-08!39;UBERON:0002020!4.12e-07!34;UBERON:0002021!4.46e-07!10;UBERON:0000411!4.46e-07!10;UBERON:0001950!4.46e-07!10;UBERON:0002791!9.99e-07!29;UBERON:0003528!9.99e-07!29;UBERON:0001893!9.99e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.10e-17,64;UBERON:0003075,7.10e-17,64;UBERON:0007284,7.10e-17,64;UBERON:0010314,4.31e-15,92;UBERON:0003056,1.33e-13,49;UBERON:0000073,4.73e-13,54;UBERON:0010371,2.90e-12,73;UBERON:0001049,6.87e-12,52;UBERON:0005068,6.87e-12,52;UBERON:0006241,6.87e-12,52;UBERON:0007135,6.87e-12,52;UBERON:0000955,3.70e-11,47;UBERON:0006238,3.70e-11,47;UBERON:0001016,3.85e-11,75;UBERON:0001017,6.14e-11,73;UBERON:0004121,7.30e-11,95;UBERON:0000924,7.30e-11,95;UBERON:0006601,7.30e-11,95;UBERON:0002616,1.12e-10,46;UBERON:0003080,2.33e-09,40;UBERON:0002780,7.61e-09,39;UBERON:0001890,7.61e-09,39;UBERON:0006240,7.61e-09,39;UBERON:0002021,2.67e-08,10;UBERON:0000411,2.67e-08,10;UBERON:0001950,2.67e-08,10;UBERON:0002020,6.21e-08,34;UBERON:0003528,2.16e-07,29;UBERON:0002791,2.16e-07,29;UBERON:0001893,2.16e-07,29|phase1_expression=0.320297694209588,0,0.454999239389536,0.30246421130683,0,0.16787927191189,0,0.903863264091034,0.703943610758334,1.63845168425395,0.171217968225505,0.398860794976682,2.05440875917447,2.09808965805594,1.66554880907831,0.809901069559304,0.699561878128147,0.630924330716475,0.685572168028694,0.42438965179803,10.5453679787327,0.198581902401771,0.783599367416806,0.159992422793407,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0.7813353445238,0.523523743973798,0,0,0,1.76255545165808,1.52065396829272,0.550640256485045,0.782391344348039,0.872100625521786,0,1.36100929351998,0.699932108126813,0,0.671130424230945,0,2.01656279485478,2.82985379639542,2.86533439938757,2.57836046138721,1.01158230429799,1.05798195854407,0.633831403506179,1.35537812827653,0,0,0,0.7104801149461,0.299600110518405,0,1.14058573539325,0.945041568321835,1.26194976810829,1.71390590642282,1.76694832761291,1.10241719293459,0.766763768145891,0,11.0115880999389,10.4703617229854,9.83081812839958,0.659431438650969,0.731901148819277,1.04182674111352,8.37548997004143,8.4414391504752,8.40390362772456,1.47314292736834,3.55929201997757,0.372798891650601,1.13589289999776,1.28471652181535,0.869593466105033,0,0,0.539703191637817,0.649776417447669,0,2.38755514223978,1.36344258062446,1.03914401841148,0.35333957451034,0.422530259330042,0,0,7.11066703153331,0,0.506719730950197,0.505524445014783,1.48439043634778,3.10725460376606,2.3750742250372,0.346970653532272,0.608930956624282,0,1.80867168663147,1.29347577849275,1.0053327306374,0.741584903203122,1.73519228303894,0.884610551949874,0.323533699894818,0.883366073841574,2.90925151881133,0,18.1524094147159,12.7762491156208,0,0.359445373517761,0,0.127070227073065,8.53806644607489,7.32000964509802,1.38219787324151,13.0368240144207,8.69432554923124,9.97382613885888,10.707923362472,0.611036183101898,0.622034853050465,0.758168275301024,0.631325567659422,3.3831315170303,12.1848115349741,28.4498165092452,23.5099515823715,20.0707672496417,14.7330778327577,7.30873451565885,4.13925393182425,0.431135985865684,0.945530400839096,1.05570674498369,0.43839146485515,1.11218899690239,0.348252166522167,0.823128545631774,1.99034266818493,0,0,0.284163499395593,1.03562886267751,0.938104239924385,1.44049649168812,2.13070262026689,0.983821158737019,2.77680803197281,2.09280550275367,3.21928081679543,2.56883753207773,0.493679549740441,1.97000956894914,0.324275238183423,0.292399974850665,0.219550115291051,0.536825675041487,15.1408762966172,2.16099685996497,0.330418782983798,0.264450566663544,0.213288250535234,1.62565670302307,0.515469845288373,0.80673409849337,0.444756087689741,0.190225626112559,0.474529061544512,0.329397909448022,0,0,0.19496408711912,0,0.432276099749388,0.398282546508734,0.379335801906163,0.913988100877831,0,1.22190796707189,0.775809948670503,0.841629838683823,0.442655759869801,0.442830443938806,0.627994911365499,0.246794327843601,0.296452627087149,0,0.589676985339609,0.899448449539415,1.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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:101739
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=uniprot:F6RB63
|association_with_transcript=287bp_to_ENSMUST00000130626_5end
|cluster_id=chr4:83131749..83131794,-
|description=CAGE_peak_3_at_Psip1_5end
|id=chr4:83131749..83131794,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!4.59e-14!71;UBERON:0003075!4.59e-14!71;UBERON:0007284!4.59e-14!71;UBERON:0007811!8.21e-14!86;UBERON:0000033!2.44e-13!63;UBERON:0000153!5.53e-13!94;UBERON:0003056!7.68e-12!49;UBERON:0000955!9.50e-12!50;UBERON:0006238!9.50e-12!50;UBERON:0002616!2.51e-11!49;UBERON:0001049!8.64e-11!52;UBERON:0005068!8.64e-11!52;UBERON:0006241!8.64e-11!52;UBERON:0007135!8.64e-11!52;UBERON:0000073!1.92e-09!75;UBERON:0001016!1.92e-09!75;UBERON:0001017!2.81e-09!73;UBERON:0005743!2.81e-09!73;UBERON:0004121!1.15e-08!102;UBERON:0000924!1.15e-08!102;UBERON:0006601!1.15e-08!102;UBERON:0003080!3.63e-08!40;UBERON:0002780!9.69e-08!39;UBERON:0001890!9.69e-08!39;UBERON:0006240!9.69e-08!39;UBERON:0002020!4.12e-07!34;UBERON:0002021!4.46e-07!10;UBERON:0000411!4.46e-07!10;UBERON:0001950!4.46e-07!10;UBERON:0002791!9.99e-07!29;UBERON:0003528!9.99e-07!29;UBERON:0001893!9.99e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.10e-17,64;UBERON:0003075,7.10e-17,64;UBERON:0007284,7.10e-17,64;UBERON:0010314,4.31e-15,92;UBERON:0003056,1.33e-13,49;UBERON:0000073,4.73e-13,54;UBERON:0010371,2.90e-12,73;UBERON:0001049,6.87e-12,52;UBERON:0005068,6.87e-12,52;UBERON:0006241,6.87e-12,52;UBERON:0007135,6.87e-12,52;UBERON:0000955,3.70e-11,47;UBERON:0006238,3.70e-11,47;UBERON:0001016,3.85e-11,75;UBERON:0001017,6.14e-11,73;UBERON:0004121,7.30e-11,95;UBERON:0000924,7.30e-11,95;UBERON:0006601,7.30e-11,95;UBERON:0002616,1.12e-10,46;UBERON:0003080,2.33e-09,40;UBERON:0002780,7.61e-09,39;UBERON:0001890,7.61e-09,39;UBERON:0006240,7.61e-09,39;UBERON:0002021,2.67e-08,10;UBERON:0000411,2.67e-08,10;UBERON:0001950,2.67e-08,10;UBERON:0002020,6.21e-08,34;UBERON:0003528,2.16e-07,29;UBERON:0002791,2.16e-07,29;UBERON:0001893,2.16e-07,29
|phase1_expression=0.320297694209588,0,0.454999239389536,0.30246421130683,0,0.16787927191189,0,0.903863264091034,0.703943610758334,1.63845168425395,0.171217968225505,0.398860794976682,2.05440875917447,2.09808965805594,1.66554880907831,0.809901069559304,0.699561878128147,0.630924330716475,0.685572168028694,0.42438965179803,10.5453679787327,0.198581902401771,0.783599367416806,0.159992422793407,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0.7813353445238,0.523523743973798,0,0,0,1.76255545165808,1.52065396829272,0.550640256485045,0.782391344348039,0.872100625521786,0,1.36100929351998,0.699932108126813,0,0.671130424230945,0,2.01656279485478,2.82985379639542,2.86533439938757,2.57836046138721,1.01158230429799,1.05798195854407,0.633831403506179,1.35537812827653,0,0,0,0.7104801149461,0.299600110518405,0,1.14058573539325,0.945041568321835,1.26194976810829,1.71390590642282,1.76694832761291,1.10241719293459,0.766763768145891,0,11.0115880999389,10.4703617229854,9.83081812839958,0.659431438650969,0.731901148819277,1.04182674111352,8.37548997004143,8.4414391504752,8.40390362772456,1.47314292736834,3.55929201997757,0.372798891650601,1.13589289999776,1.28471652181535,0.869593466105033,0,0,0.539703191637817,0.649776417447669,0,2.38755514223978,1.36344258062446,1.03914401841148,0.35333957451034,0.422530259330042,0,0,7.11066703153331,0,0.506719730950197,0.505524445014783,1.48439043634778,3.10725460376606,2.3750742250372,0.346970653532272,0.608930956624282,0,1.80867168663147,1.29347577849275,1.0053327306374,0.741584903203122,1.73519228303894,0.884610551949874,0.323533699894818,0.883366073841574,2.90925151881133,0,18.1524094147159,12.7762491156208,0,0.359445373517761,0,0.127070227073065,8.53806644607489,7.32000964509802,1.38219787324151,13.0368240144207,8.69432554923124,9.97382613885888,10.707923362472,0.611036183101898,0.622034853050465,0.758168275301024,0.631325567659422,3.3831315170303,12.1848115349741,28.4498165092452,23.5099515823715,20.0707672496417,14.7330778327577,7.30873451565885,4.13925393182425,0.431135985865684,0.945530400839096,1.05570674498369,0.43839146485515,1.11218899690239,0.348252166522167,0.823128545631774,1.99034266818493,0,0,0.284163499395593,1.03562886267751,0.938104239924385,1.44049649168812,2.13070262026689,0.983821158737019,2.77680803197281,2.09280550275367,3.21928081679543,2.56883753207773,0.493679549740441,1.97000956894914,0.324275238183423,0.292399974850665,0.219550115291051,0.536825675041487,15.1408762966172,2.16099685996497,0.330418782983798,0.264450566663544,0.213288250535234,1.62565670302307,0.515469845288373,0.80673409849337,0.444756087689741,0.190225626112559,0.474529061544512,0.329397909448022,0,0,0.19496408711912,0,0.432276099749388,0.398282546508734,0.379335801906163,0.913988100877831,0,1.22190796707189,0.775809948670503,0.841629838683823,0.442655759869801,0.442830443938806,0.627994911365499,0.246794327843601,0.296452627087149,0,0.589676985339609,0.899448449539415,1.21716072833102,0.964708639009667,0.25462585178142,0.575392274901621,0.648540907100142,0.823684239564244,4.31304619582064,1.11642284300551,0.312037673114561,0.252578877947112,0.179397413521912,0.964887042726734,0.554259570499814,0.757965647081939,0.651859905768103,0.678980343100753,0.469380496577004,0.670025029767263,0.714130922658041,0.195133647857799,0.630540576424764,1.10732344824387,0.318909537314974,0.81931657357869,0.690739927463582,0.433947175744535,3.01582567878545,0,0.491764273019036,0,8.83028244932856,11.2523219128515,1.80328439914343,1.76729649043061,2.2085575359138,1.17131623288992,1.29254038639679,1.43381278771531,1.33679204449436,0.566153061577665,0,1.46127928955656,0.395287777946524,5.14114106274891,2.2710413633323,0.712262414669021,0.81443479676788,0.659880491890142,0,0.242780636154981,0.302323556964751,0.754420319023592,0.590603785761546,0.614870295887855,0.258428293168221,1.09060118843252,0.712994756769443,0.948110273807448,1.05418608574999,1.03135543248187,11.234506989875,0.900305470156551,0.129358683782755,1.50035924522115,4.07882537377229,2.49716344642899,2.63278432963394,0,20.4164386015428,8.04961869282517,1.32317038832977,0.8244312647074,0.484393280087717,0.180938774784468,0.238744688006273,0.164140899745061,0.582961673259701,10.9400928186201,0.512612642393558,0.206386867963223,1.11116716421827,0.753473828018764,1.91371918809435,1.83022538565218,0.339956859987711,0.419854356970974,0.414599921413271,0,0.949007980743406,0.813277868507395,0.324016022465404,0.836353184057875,2.18362563746178,0.539457385539283,0.330613822901344,0.785267825952089,0.129614973291793,0.621339313086926,44.531742156051,2.24274819065968,0.992750942742586,2.91676782516071,1.93739735216597,5.23763989021412,5.98521917093345,2.73429208172295,6.8158573876712,28.2653421366427,17.8578603879877,2.8441000856536,1.41907650703115,1.64337531463724,2.46849563657811,1.79026695667481,0.993406773906324,1.56254084375959,1.62458479892035,1.9183625490148,1.447929326445,0.907435666231565,1.46186821109629,1.25075394132428,0.584384510907845,0,3.10780334723691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|short_description=p3@Psip1
}}

Revision as of 18:36, 5 August 2015

Short description:p3@Psip1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Psip1_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: 287bp_to_ENSMUST00000130626_5end
EntrezGene:101739
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Psip1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.05
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.10
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.83
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.38
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.40
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D91.14
Mouse Schwann, donor2.CNhs12573.11746-123F91.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H93.11
adrenal gland, adult.CNhs10508.49-24D72.38
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H11.74
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B218.15
cerebellum, neonate N30.CNhs11135.1395-42I212.78
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A48.54
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D513.04
cortex, neonate N30.CNhs11107.1392-42F28.69
diencephalon, adult.CNhs10482.20-12F29.97
diencephalon, neonate N30.CNhs11201.1388-42B210.71
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C63.38
eyeball, embryo E14.CNhs10521.399-16E212.18
eyeball, embryo E15.CNhs10593.426-16C928.45
eyeball, embryo E17.CNhs11023.1261-18D423.51
eyeball, neonate N00.CNhs11207.633-15C620.07
eyeball, neonate N01.CNhs11140.1532-43E714.73
eyeball, neonate N02.CNhs11205.1551-44G87.31
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C62.78
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G33.22
heart, neonate N00.CNhs11213.639-21E32.57
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G11.97
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E815.14
hippocampus, neonate N00.CNhs11228.627-43G12.16
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C28.83
medulla oblongata, neonate N30.CNhs11200.1396-42A311.25
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.80
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I95.14
ovary, adult.CNhs10507.91-2I72.27
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G811.23
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B94.08
pituitary gland, embryo E16.CNhs11036.449-43F62.50
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I720.42
placenta, adult pregnant day17.CNhs10464.577-18G38.05
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C910.94
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H11.91
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G544.53
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G55.24
testis, neonate N00.CNhs11189.1300-22B75.99
testis, neonate N07.CNhs11222.726-26I42.73
testis, neonate N10.CNhs11204.763-44D96.82
testis, neonate N20.CNhs11110.839-18H328.27
testis, neonate N30.CNhs11130.1391-42E217.86
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I21.64
thymus, embryo E16.CNhs11002.456-26C52.47
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F81.56
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C41.92
thymus, neonate N07.CNhs11211.713-19D31.45
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A21.46
thymus, neonate N25.CNhs11125.1362-25G71.25
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.58
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G510.74
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F53.19
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.73
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.18
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.94
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.07
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.78
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.98
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm7.10e-1764
neural plate7.10e-1764
presumptive neural plate7.10e-1764
structure with developmental contribution from neural crest4.31e-1592
pre-chordal neural plate1.33e-1349
regional part of nervous system4.73e-1354
ecto-epithelium2.90e-1273
neural tube6.87e-1252
neural rod6.87e-1252
future spinal cord6.87e-1252
neural keel6.87e-1252
brain3.70e-1147
future brain3.70e-1147
nervous system3.85e-1175
central nervous system6.14e-1173
ectoderm-derived structure7.30e-1195
ectoderm7.30e-1195
presumptive ectoderm7.30e-1195
regional part of brain1.12e-1046
anterior neural tube2.33e-0940
regional part of forebrain7.61e-0939
forebrain7.61e-0939
future forebrain7.61e-0939
occipital lobe2.67e-0810
visual cortex2.67e-0810
neocortex2.67e-0810
gray matter6.21e-0834
brain grey matter2.16e-0729
regional part of telencephalon2.16e-0729
telencephalon2.16e-0729
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