FFCP PHASE1:Mm9::chr13:22098458..22098471,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=129 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:22098458..22098471,+ | |||
|description=CAGE_peak_at_chr13:22098458..22098471,+ | |description=CAGE_peak_at_chr13:22098458..22098471,+ | ||
|id=chr13:22098458..22098471,+ | |id=chr13:22098458..22098471,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.74e-17!23;UBERON:0000974!2.74e-17!23;UBERON:0004807!2.74e-17!23;UBERON:0005058!2.74e-17!23;UBERON:0003351!2.74e-17!23;UBERON:0009113!2.74e-17!23;UBERON:0003295!2.74e-17!23;UBERON:0009722!2.74e-17!23;UBERON:0005562!2.74e-17!23;UBERON:0007690!2.74e-17!23;UBERON:0006562!1.90e-16!24;UBERON:0003408!1.90e-16!24;UBERON:0001557!1.90e-16!24;UBERON:0001042!1.90e-16!24;UBERON:0008814!1.90e-16!24;UBERON:0009145!1.90e-16!24;UBERON:0000072!2.68e-14!27;UBERON:0004177!4.10e-13!29;UBERON:0000063!2.23e-10!35;UBERON:0000490!3.26e-09!66;UBERON:0000065!1.88e-08!41;UBERON:0002530!2.99e-08!65;UBERON:0001004!3.48e-08!42;UBERON:0003929!9.39e-08!55;UBERON:0002390!1.86e-07!45;UBERON:0003061!1.86e-07!45;UBERON:0005057!2.01e-07!51;UBERON:0002368!7.48e-07!60;UBERON:0002193!8.01e-07!48 | |ontology_enrichment_uberon=UBERON:0002370!2.74e-17!23;UBERON:0000974!2.74e-17!23;UBERON:0004807!2.74e-17!23;UBERON:0005058!2.74e-17!23;UBERON:0003351!2.74e-17!23;UBERON:0009113!2.74e-17!23;UBERON:0003295!2.74e-17!23;UBERON:0009722!2.74e-17!23;UBERON:0005562!2.74e-17!23;UBERON:0007690!2.74e-17!23;UBERON:0006562!1.90e-16!24;UBERON:0003408!1.90e-16!24;UBERON:0001557!1.90e-16!24;UBERON:0001042!1.90e-16!24;UBERON:0008814!1.90e-16!24;UBERON:0009145!1.90e-16!24;UBERON:0000072!2.68e-14!27;UBERON:0004177!4.10e-13!29;UBERON:0000063!2.23e-10!35;UBERON:0000490!3.26e-09!66;UBERON:0000065!1.88e-08!41;UBERON:0002530!2.99e-08!65;UBERON:0001004!3.48e-08!42;UBERON:0003929!9.39e-08!55;UBERON:0002390!1.86e-07!45;UBERON:0003061!1.86e-07!45;UBERON:0005057!2.01e-07!51;UBERON:0002368!7.48e-07!60;UBERON:0002193!8.01e-07!48 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.24e-12,23;UBERON:0000974,2.24e-12,23;UBERON:0004807,2.24e-12,23;UBERON:0005058,2.24e-12,23;UBERON:0003351,2.24e-12,23;UBERON:0009113,2.24e-12,23;UBERON:0003295,2.24e-12,23;UBERON:0009722,2.24e-12,23;UBERON:0005562,2.24e-12,23;UBERON:0007690,2.24e-12,23;UBERON:0006562,6.63e-12,24;UBERON:0003408,6.63e-12,24;UBERON:0001557,6.63e-12,24;UBERON:0001042,6.63e-12,24;UBERON:0008814,6.63e-12,24;UBERON:0009145,6.63e-12,24;UBERON:0000072,1.06e-10,27;UBERON:0004177,4.90e-10,29;UBERON:0005057,4.90e-10,29;UBERON:0000077,1.72e-08,35;UBERON:0007811,2.78e-08,36;UBERON:0000065,2.16e-07,41;UBERON:0001004,3.07e-07,42;UBERON:0000153,4.30e-07,43;UBERON:0002390,8.07e-07,45;UBERON:0003061,8.07e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198581902401771,0,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0.7813353445238,0.523523743973798,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,5.0681303822541,3.3894615864393,1.29920822977795,0.895133478337407,0.993406773906324,0.841368146639782,0,0.201932899896295,0.685861259894999,0.100826185136841,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0.409231043169689,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198581902401771,0,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0.7813353445238,0.523523743973798,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,5.0681303822541,3.3894615864393,1.29920822977795,0.895133478337407,0.993406773906324,0.841368146639782,0,0.201932899896295,0.685861259894999,0.100826185136841,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0.0985044823755635,0.409231043169689,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:22098458..22098471,+ | |short_description=p@chr13:22098458..22098471,+ | ||
}} | }} |
Latest revision as of 19:08, 5 August 2015
Short description: | p@chr13:22098458..22098471, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:22098458..22098471, + |
Coexpression cluster: | MCL_coexpression_mm9:129 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.24e-12 | 23 |
neck | 2.24e-12 | 23 |
respiratory system epithelium | 2.24e-12 | 23 |
hemolymphoid system gland | 2.24e-12 | 23 |
pharyngeal epithelium | 2.24e-12 | 23 |
thymic region | 2.24e-12 | 23 |
pharyngeal gland | 2.24e-12 | 23 |
entire pharyngeal arch endoderm | 2.24e-12 | 23 |
thymus primordium | 2.24e-12 | 23 |
early pharyngeal endoderm | 2.24e-12 | 23 |
pharynx | 6.63e-12 | 24 |
gland of gut | 6.63e-12 | 24 |
upper respiratory tract | 6.63e-12 | 24 |
chordate pharynx | 6.63e-12 | 24 |
pharyngeal arch system | 6.63e-12 | 24 |
pharyngeal region of foregut | 6.63e-12 | 24 |
segment of respiratory tract | 1.06e-10 | 27 |
hemopoietic organ | 4.90e-10 | 29 |
immune organ | 4.90e-10 | 29 |
mixed endoderm/mesoderm-derived structure | 1.72e-08 | 35 |
craniocervical region | 2.78e-08 | 36 |
respiratory tract | 2.16e-07 | 41 |
respiratory system | 3.07e-07 | 42 |
anterior region of body | 4.30e-07 | 43 |
hematopoietic system | 8.07e-07 | 45 |
blood island | 8.07e-07 | 45 |