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FFCP PHASE1:Mm9::chr6:4550334..4550355,+: Difference between revisions

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{{FFCP|EntrezGene=213819|HGNC=|MCL_coexpression_id=8|UniProt=Q7TN73|association_with_transcript=-484bp_to_ENSMUST00000015333_5end|description=CAGE_peak_4_at_Casd1_5end|id=chr6:4550334..4550355,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,5.38e-12,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!2.45e-16!22;UBERON:0007499!2.45e-16!22;UBERON:0006925!2.45e-16!22;UBERON:0009497!2.45e-16!22;UBERON:0000015!2.45e-16!22;UBERON:0002423!2.45e-16!22;UBERON:0006235!2.45e-16!22;UBERON:0008835!2.45e-16!22;UBERON:0003894!2.45e-16!22;UBERON:0004161!2.45e-16!22;UBERON:0008836!2.45e-16!22;UBERON:0009854!3.90e-15!23;UBERON:0009856!3.90e-15!23;UBERON:0002365!8.79e-15!25;UBERON:0002330!8.79e-15!25;UBERON:0005177!2.36e-10!85;UBERON:0005172!1.08e-09!49;UBERON:0005173!1.08e-09!49;UBERON:0002417!1.08e-09!49;UBERON:0000916!1.08e-09!49;UBERON:0000466!4.04e-08!79;UBERON:0009569!3.69e-07!66;UBERON:0002100!7.01e-07!98;UBERON:0005256!8.64e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.60e-35,22;UBERON:0007499,2.60e-35,22;UBERON:0006925,2.60e-35,22;UBERON:0009497,2.60e-35,22;UBERON:0000015,2.60e-35,22;UBERON:0002423,2.60e-35,22;UBERON:0006235,2.60e-35,22;UBERON:0008835,2.60e-35,22;UBERON:0003894,2.60e-35,22;UBERON:0004161,2.60e-35,22;UBERON:0008836,2.60e-35,22;UBERON:0002365,6.06e-34,25;UBERON:0002330,6.06e-34,25;UBERON:0009854,1.48e-33,23;UBERON:0009856,1.48e-33,23;UBERON:0005256,9.95e-15,45;UBERON:0005172,1.29e-14,49;UBERON:0005173,1.29e-14,49;UBERON:0002417,1.29e-14,49;UBERON:0000916,1.29e-14,49;UBERON:0003914,6.78e-14,47;UBERON:0003929,3.54e-11,55;UBERON:0003104,9.40e-11,61;UBERON:0009142,9.40e-11,61;UBERON:0002530,6.74e-10,65;UBERON:0002368,7.45e-10,60;UBERON:0009569,1.44e-09,66;UBERON:0000949,1.94e-09,72;UBERON:0005177,4.35e-09,79;UBERON:0000490,1.54e-08,66;UBERON:0001041,5.26e-08,80;UBERON:0005911,5.73e-08,69;UBERON:0000025,1.81e-07,114;UBERON:0004111,2.26e-07,122;UBERON:0002100,2.44e-07,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,1.36069264241712,0.0992909512008853,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0.498703936075477,0.204169356262369,0,0,0,0.588231488031014,0,0,0,0.101376931219515,0,0,0.872100625521786,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,1.15265491596466,0,0,0.210324961351382,0.285650984403804,0.220868540951614,0.122490799214954,0,0,1.10115880999389,0.383062014255563,0.307213066512487,0,0.274462930807229,0,1.11673199600552,0.56276261003168,0.30559649555362,0.294628585473668,0,0.372798891650601,0.075726193333184,0,3.47837386442013,3.44169550792555,1.3599426674155,13.4925797909454,25.3412802804591,28.2256938871321,3.7919993435573,0,0,0,0,0,0,0,0,0,0,6.96521666286266,0,0.148442139064825,0,0,0,0.301445281105245,0.587943535678524,0.125666591329675,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,1.3481157546434,1.37250180845588,0.125654352112864,0,0.511430914660661,2.49345653471472,1.46017136760982,0.101839363850316,0.746441823660558,0.505445516867349,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0.720332286654991,0,0,0,0.232236671860439,0.257734922644187,0.605050573870028,0,0.380451252225118,0,0.164698954724011,0,0,0.58489226135736,0,1.08069024937347,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0.280543279561274,0.569128834118316,1.18088118383682,0.941992367048249,0.616985819609003,11.5616524563988,0.500535317148282,0.393117990226406,0.224862112384854,1.42002084971952,2.17059443777175,5.34714288740982,7.19240343627027,13.1329533687779,3.84385978463314,18.6898668485561,12.2806512730606,15.2898459826135,10.3557339958316,14.5311904952749,11.0962009913574,0.369506380333209,0,0.162964976442026,0.169745085775188,0,0,0.714130922658041,0,0.630540576424764,0,0,0,0.172684981865896,0.289298117163023,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,1.64970122972535,2.65490276679926,0.971122544619926,0.604647113929502,1.32023555829129,0.885905678642318,0.922305443831782,0.258428293168221,0.363533729477506,0.712994756769443,0.948110273807448,0,0,0.340439605753788,0.18006109403131,0,0,0.177340233642274,0,0,0,0.23467170806371,0.21183207086382,0,0,0.161464426695906,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0.813277868507395,0.216010681643603,0.209088296014469,0.436725127492355,0,1.23980183588004,0.26175594198403,0.518459893167171,3.72803587852155,9.58277995763124,0,0,0,0,0,0,0.2604087696879,0,0,3.45636007509439,0,0,0,0,0,0,0,0,0.201932899896295,0,0,0,0,0,0.453460767230423,0,0,0,0.386379188064381,0.187682475451182,1.09890974560359,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.798049746802062,0.170733605754134,0.486213434136588,0,0,0.44449345560323,0.618105171716683,0.962757628775446,0,0.760437899670719,0.565879024158229,0.561849044819294,0.640251524048693,0.574354689556133,0.952587382566147,0.231768651889711,0.38581844092741,0.824171801606613,0.735994600671987,0.342869252385415,0.887379030796687,0.953744759789284,0.872078499793971,0.564656282491984,0.676916863133412,0.548783918618318,1.8414879800649,0.950628796921032,0,0.830445126869219,0.394017929502254,0.409231043169689,0.619747364743864,0.578719832943424,0,0.233931608445408,1.50409737833809,0.191288332068843,0,0.231867835620421|short_description=p4@Casd1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:213819
|HGNC=
|MCL_coexpression_id=8
|TSSclassifier=NA
|UniProt=uniprot:Q7TN73
|association_with_transcript=-484bp_to_ENSMUST00000015333_5end
|cluster_id=chr6:4550334..4550355,+
|description=CAGE_peak_4_at_Casd1_5end
|id=chr6:4550334..4550355,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000182,5.38e-12,5
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!2.45e-16!22;UBERON:0007499!2.45e-16!22;UBERON:0006925!2.45e-16!22;UBERON:0009497!2.45e-16!22;UBERON:0000015!2.45e-16!22;UBERON:0002423!2.45e-16!22;UBERON:0006235!2.45e-16!22;UBERON:0008835!2.45e-16!22;UBERON:0003894!2.45e-16!22;UBERON:0004161!2.45e-16!22;UBERON:0008836!2.45e-16!22;UBERON:0009854!3.90e-15!23;UBERON:0009856!3.90e-15!23;UBERON:0002365!8.79e-15!25;UBERON:0002330!8.79e-15!25;UBERON:0005177!2.36e-10!85;UBERON:0005172!1.08e-09!49;UBERON:0005173!1.08e-09!49;UBERON:0002417!1.08e-09!49;UBERON:0000916!1.08e-09!49;UBERON:0000466!4.04e-08!79;UBERON:0009569!3.69e-07!66;UBERON:0002100!7.01e-07!98;UBERON:0005256!8.64e-07!47
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.60e-35,22;UBERON:0007499,2.60e-35,22;UBERON:0006925,2.60e-35,22;UBERON:0009497,2.60e-35,22;UBERON:0000015,2.60e-35,22;UBERON:0002423,2.60e-35,22;UBERON:0006235,2.60e-35,22;UBERON:0008835,2.60e-35,22;UBERON:0003894,2.60e-35,22;UBERON:0004161,2.60e-35,22;UBERON:0008836,2.60e-35,22;UBERON:0002365,6.06e-34,25;UBERON:0002330,6.06e-34,25;UBERON:0009854,1.48e-33,23;UBERON:0009856,1.48e-33,23;UBERON:0005256,9.95e-15,45;UBERON:0005172,1.29e-14,49;UBERON:0005173,1.29e-14,49;UBERON:0002417,1.29e-14,49;UBERON:0000916,1.29e-14,49;UBERON:0003914,6.78e-14,47;UBERON:0003929,3.54e-11,55;UBERON:0003104,9.40e-11,61;UBERON:0009142,9.40e-11,61;UBERON:0002530,6.74e-10,65;UBERON:0002368,7.45e-10,60;UBERON:0009569,1.44e-09,66;UBERON:0000949,1.94e-09,72;UBERON:0005177,4.35e-09,79;UBERON:0000490,1.54e-08,66;UBERON:0001041,5.26e-08,80;UBERON:0005911,5.73e-08,69;UBERON:0000025,1.81e-07,114;UBERON:0004111,2.26e-07,122;UBERON:0002100,2.44e-07,90
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,1.36069264241712,0.0992909512008853,0,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0.498703936075477,0.204169356262369,0,0,0,0.588231488031014,0,0,0,0.101376931219515,0,0,0.872100625521786,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,1.15265491596466,0,0,0.210324961351382,0.285650984403804,0.220868540951614,0.122490799214954,0,0,1.10115880999389,0.383062014255563,0.307213066512487,0,0.274462930807229,0,1.11673199600552,0.56276261003168,0.30559649555362,0.294628585473668,0,0.372798891650601,0.075726193333184,0,3.47837386442013,3.44169550792555,1.3599426674155,13.4925797909454,25.3412802804591,28.2256938871321,3.7919993435573,0,0,0,0,0,0,0,0,0,0,6.96521666286266,0,0.148442139064825,0,0,0,0.301445281105245,0.587943535678524,0.125666591329675,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,1.3481157546434,1.37250180845588,0.125654352112864,0,0.511430914660661,2.49345653471472,1.46017136760982,0.101839363850316,0.746441823660558,0.505445516867349,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0.720332286654991,0,0,0,0.232236671860439,0.257734922644187,0.605050573870028,0,0.380451252225118,0,0.164698954724011,0,0,0.58489226135736,0,1.08069024937347,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0.280543279561274,0.569128834118316,1.18088118383682,0.941992367048249,0.616985819609003,11.5616524563988,0.500535317148282,0.393117990226406,0.224862112384854,1.42002084971952,2.17059443777175,5.34714288740982,7.19240343627027,13.1329533687779,3.84385978463314,18.6898668485561,12.2806512730606,15.2898459826135,10.3557339958316,14.5311904952749,11.0962009913574,0.369506380333209,0,0.162964976442026,0.169745085775188,0,0,0.714130922658041,0,0.630540576424764,0,0,0,0.172684981865896,0.289298117163023,0,0,0,0,0.481651769963376,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,1.64970122972535,2.65490276679926,0.971122544619926,0.604647113929502,1.32023555829129,0.885905678642318,0.922305443831782,0.258428293168221,0.363533729477506,0.712994756769443,0.948110273807448,0,0,0.340439605753788,0.18006109403131,0,0,0.177340233642274,0,0,0,0.23467170806371,0.21183207086382,0,0,0.161464426695906,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0.813277868507395,0.216010681643603,0.209088296014469,0.436725127492355,0,1.23980183588004,0.26175594198403,0.518459893167171,3.72803587852155,9.58277995763124,0,0,0,0,0,0,0.2604087696879,0,0,3.45636007509439,0,0,0,0,0,0,0,0,0.201932899896295,0,0,0,0,0,0.453460767230423,0,0,0,0.386379188064381,0.187682475451182,1.09890974560359,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.798049746802062,0.170733605754134,0.486213434136588,0,0,0.44449345560323,0.618105171716683,0.962757628775446,0,0.760437899670719,0.565879024158229,0.561849044819294,0.640251524048693,0.574354689556133,0.952587382566147,0.231768651889711,0.38581844092741,0.824171801606613,0.735994600671987,0.342869252385415,0.887379030796687,0.953744759789284,0.872078499793971,0.564656282491984,0.676916863133412,0.548783918618318,1.8414879800649,0.950628796921032,0,0.830445126869219,0.394017929502254,0.409231043169689,0.619747364743864,0.578719832943424,0,0.233931608445408,1.50409737833809,0.191288332068843,0,0.231867835620421
|short_description=p4@Casd1
}}

Revision as of 19:09, 5 August 2015

Short description:p4@Casd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Casd1_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: -484bp_to_ENSMUST00000015333_5end
EntrezGene:213819
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p4@Casd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C813.49
Mouse hepatocyte, donor6.CNhs13090.11822-124F425.34
Mouse hepatocyte, donor8.CNhs13091.11824-124F628.23
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.97
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F22.49
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B211.56
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A35.35
liver, embryo E18.CNhs10579.499-43G47.19
liver, neonate N00.CNhs11117.641-24F413.13
liver, neonate N03.CNhs11123.1345-25G23.84
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H212.28
liver, neonate N10.CNhs11115.751-24B915.29
liver, neonate N20.CNhs11220.823-25A310.36
liver, neonate N25.CNhs11198.1368-26H114.53
liver, neonate N30.CNhs11106.1382-42D111.10
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G59.58
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E23.46
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hepatocyte5.38e-125

Uber anatomy
Ontology termp-valuen
liver2.60e-3522
epithelial sac2.60e-3522
digestive gland2.60e-3522
epithelium of foregut-midgut junction2.60e-3522
anatomical boundary2.60e-3522
hepatobiliary system2.60e-3522
foregut-midgut junction2.60e-3522
hepatic diverticulum2.60e-3522
liver primordium2.60e-3522
septum transversum2.60e-3522
liver bud2.60e-3522
exocrine gland6.06e-3425
exocrine system6.06e-3425
digestive tract diverticulum1.48e-3323
sac1.48e-3323
trunk mesenchyme9.95e-1545
abdomen element1.29e-1449
abdominal segment element1.29e-1449
abdominal segment of trunk1.29e-1449
abdomen1.29e-1449
epithelial tube6.78e-1447
gut epithelium3.54e-1155
mesenchyme9.40e-1161
entire embryonic mesenchyme9.40e-1161
gland6.74e-1065
endocrine gland7.45e-1060
subdivision of trunk1.44e-0966
endocrine system1.94e-0972
trunk region element4.35e-0979
unilaminar epithelium1.54e-0866
foregut5.26e-0880
endo-epithelium5.73e-0869
tube1.81e-07114
anatomical conduit2.26e-07122
trunk2.44e-0790
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