FFCP PHASE1:Mm9::chr9:95654341..95654349,-: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr9:95654341..95654349,- to FFCP PHASE1:Mm9::chr9:95654341..95654349,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=934 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:95654341..95654349,- | |||
|description=CAGE_peak_at_chr9:95654341..95654349,- | |||
|id=chr9:95654341..95654349,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.49e-08,25;CL:0002563,1.36e-07,9;CL:0002251,1.36e-07,9;CL:0000682,1.57e-07,3;CL:0000075,3.78e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.02e-19!59;UBERON:0000160!3.69e-19!43;UBERON:0004119!1.28e-13!130;UBERON:0000925!1.28e-13!130;UBERON:0006595!1.28e-13!130;UBERON:0001007!1.39e-13!128;UBERON:0001555!1.39e-13!128;UBERON:0007026!1.39e-13!128;UBERON:0004921!1.49e-12!126;UBERON:0004185!1.49e-12!126;UBERON:0000344!1.64e-11!15;UBERON:0001242!3.17e-10!13;UBERON:0000060!3.17e-10!13;UBERON:0001262!3.17e-10!13;UBERON:0004786!3.17e-10!13;UBERON:0000485!4.86e-08!11;UBERON:0004923!5.74e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.11e-37,31;UBERON:0005409,1.58e-29,47;UBERON:0000344,1.53e-15,15;UBERON:0001242,2.90e-15,13;UBERON:0001262,2.90e-15,13;UBERON:0004786,2.90e-15,13;UBERON:0001007,9.88e-11,116;UBERON:0001555,9.88e-11,116;UBERON:0007026,9.88e-11,116;UBERON:0000485,1.31e-10,11;UBERON:0004923,1.60e-10,24;UBERON:0004119,1.98e-10,118;UBERON:0000925,1.98e-10,118;UBERON:0006595,1.98e-10,118;UBERON:0002108,2.02e-10,4;UBERON:0004921,4.09e-10,114;UBERON:0000331,3.48e-08,3;UBERON:0002116,3.48e-08,3;UBERON:0001204,3.48e-08,3;UBERON:0001168,3.48e-08,3;UBERON:0003350,1.36e-07,9;UBERON:0004808,1.36e-07,9;UBERON:0001277,1.36e-07,9 | |||
|phase1_expression=1.12104192973356,2.79180326111489,3.63999391511629,1.20985684522732,1.00179145989269,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.17008658030214,0,0,0.95995453676044,1.14704640533585,7.46501553349526,5.1691439539089,3.01659725760245,9.69119439227507,12.3494763582366,7.53883736228036,0,0,0,0.288851619751275,1.82858109894342,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,1.10115880999389,0.383062014255563,0.307213066512487,0,0,0.52091337055676,0.558365998002762,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,2.67602497575693,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,3.76806803072898,0,0,0.173485326766136,0,0,0,0,0,1.23597483867187,0,0,0,0.220841518460394,0,1.86391761218122,0,0,7.40825460104915,0,0,0,0.149790639404823,0,0.125654352112864,0.347648640384553,0,0.20778804455956,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.91256348951394,3.96675849995316,0,0,0,0.80673409849337,2.44615848229357,1.90225626112559,26.0990983849481,5.27036655116835,7.54005626400809,4.57599885694647,5.45899443933536,8.08937467788799,14.6973873914792,18.9184209591649,0,0.114248512609729,0,0.203651327845314,0.775809948670503,0.49095073923223,0.252946148497029,1.62371162777562,0.941992367048249,0.616985819609003,0,0.166845105716094,0,0.224862112384854,0,0.482354319504834,0,0.287696137450811,0.324270453550071,0.549122826376163,5.75072826109418,0.372140947668503,0.624075346229121,0.252578877947112,0.538192240565737,0,0.184753190166605,0,0.162964976442026,0,0.469380496577004,0,0,0,0,0,0,0,0.518054945597687,0.433947175744535,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0.943025398779491,0,0.307435147943927,1.80899805217755,0,1.42598951353889,0.316036757935816,1.05418608574999,0,0.340439605753788,0,0,0.214337035031592,0,0.178368817602071,0,0,0.23467170806371,0,0,0,0,0,0,0,11.659233465194,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0.406638934253697,0.432021363287205,0.209088296014469,0.655087691238533,0.269728692769641,0.495920734352016,1.04702376793612,7.38805347763219,0.621339313086926,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,1.01362607645082,0.410843828659309,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0.103787347584177,0,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0.187283014939765,0.128050304809739,0.229741875822453,0,0.115884325944855,0.192909220463705,0,0.441596760403192,0.685738504770831,0.354951612318675,0.715308569841963,0,0.282328141245992,0.676916863133412,0.182927972872773,0,0.407412341537585,0,0,0.29551344712669,0,0.309873682371932,0.192906610981141,0,0.233931608445408,0,0,0,0 | |phase1_expression=1.12104192973356,2.79180326111489,3.63999391511629,1.20985684522732,1.00179145989269,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.17008658030214,0,0,0.95995453676044,1.14704640533585,7.46501553349526,5.1691439539089,3.01659725760245,9.69119439227507,12.3494763582366,7.53883736228036,0,0,0,0.288851619751275,1.82858109894342,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,1.10115880999389,0.383062014255563,0.307213066512487,0,0,0.52091337055676,0.558365998002762,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,2.67602497575693,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,3.76806803072898,0,0,0.173485326766136,0,0,0,0,0,1.23597483867187,0,0,0,0.220841518460394,0,1.86391761218122,0,0,7.40825460104915,0,0,0,0.149790639404823,0,0.125654352112864,0.347648640384553,0,0.20778804455956,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.91256348951394,3.96675849995316,0,0,0,0.80673409849337,2.44615848229357,1.90225626112559,26.0990983849481,5.27036655116835,7.54005626400809,4.57599885694647,5.45899443933536,8.08937467788799,14.6973873914792,18.9184209591649,0,0.114248512609729,0,0.203651327845314,0.775809948670503,0.49095073923223,0.252946148497029,1.62371162777562,0.941992367048249,0.616985819609003,0,0.166845105716094,0,0.224862112384854,0,0.482354319504834,0,0.287696137450811,0.324270453550071,0.549122826376163,5.75072826109418,0.372140947668503,0.624075346229121,0.252578877947112,0.538192240565737,0,0.184753190166605,0,0.162964976442026,0,0.469380496577004,0,0,0,0,0,0,0,0.518054945597687,0.433947175744535,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0.943025398779491,0,0.307435147943927,1.80899805217755,0,1.42598951353889,0.316036757935816,1.05418608574999,0,0.340439605753788,0,0,0.214337035031592,0,0.178368817602071,0,0,0.23467170806371,0,0,0,0,0,0,0,11.659233465194,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0.406638934253697,0.432021363287205,0.209088296014469,0.655087691238533,0.269728692769641,0.495920734352016,1.04702376793612,7.38805347763219,0.621339313086926,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,1.01362607645082,0.410843828659309,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0.103787347584177,0,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0.187283014939765,0.128050304809739,0.229741875822453,0,0.115884325944855,0.192909220463705,0,0.441596760403192,0.685738504770831,0.354951612318675,0.715308569841963,0,0.282328141245992,0.676916863133412,0.182927972872773,0,0.407412341537585,0,0,0.29551344712669,0,0.309873682371932,0.192906610981141,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr9:95654341..95654349,- | |||
}} | }} |
Latest revision as of 19:19, 5 August 2015
Short description: | p@chr9:95654341..95654349, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:95654341..95654349, - |
Coexpression cluster: | MCL_coexpression_mm9:934 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.49e-08 | 25 |
intestinal epithelial cell | 1.36e-07 | 9 |
epithelial cell of alimentary canal | 1.36e-07 | 9 |
M cell of gut | 1.57e-07 | 3 |
columnar/cuboidal epithelial cell | 3.78e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.11e-37 | 31 |
gastrointestinal system | 1.58e-29 | 47 |
mucosa | 1.53e-15 | 15 |
intestinal mucosa | 2.90e-15 | 13 |
wall of intestine | 2.90e-15 | 13 |
gastrointestinal system mucosa | 2.90e-15 | 13 |
digestive system | 9.88e-11 | 116 |
digestive tract | 9.88e-11 | 116 |
primitive gut | 9.88e-11 | 116 |
simple columnar epithelium | 1.31e-10 | 11 |
organ component layer | 1.60e-10 | 24 |
endoderm-derived structure | 1.98e-10 | 118 |
endoderm | 1.98e-10 | 118 |
presumptive endoderm | 1.98e-10 | 118 |
small intestine | 2.02e-10 | 4 |
subdivision of digestive tract | 4.09e-10 | 114 |
ileal mucosa | 3.48e-08 | 3 |
ileum | 3.48e-08 | 3 |
mucosa of small intestine | 3.48e-08 | 3 |
wall of small intestine | 3.48e-08 | 3 |
epithelium of mucosa | 1.36e-07 | 9 |
gastrointestinal system epithelium | 1.36e-07 | 9 |
intestinal epithelium | 1.36e-07 | 9 |