FFCP PHASE1:Mm9::chr1:59030534..59030545,+: Difference between revisions
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{{FFCP|EntrezGene=227154|HGNC=|MCL_coexpression_id=369|UniProt=Q8K4T3|association_with_transcript=119bp_to_NM_172656,uc007bcw.1,uc007bcx.1,uc007bcy.1,uc007bcz.1_5end|description=CAGE_peak_6_at_Stradb_5end|id=chr1:59030534..59030545,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,1.58e-08,6;CL:0000677,1.58e-08,6;CL:0000584,1.58e-08,6;CL:0000066,1.77e-07,25;CL:0000075,3.69e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!1.25e-12!25;UBERON:0002330!1.25e-12!25;UBERON:0002107!1.55e-11!22;UBERON:0007499!1.55e-11!22;UBERON:0006925!1.55e-11!22;UBERON:0009497!1.55e-11!22;UBERON:0000015!1.55e-11!22;UBERON:0002423!1.55e-11!22;UBERON:0006235!1.55e-11!22;UBERON:0008835!1.55e-11!22;UBERON:0003894!1.55e-11!22;UBERON:0004161!1.55e-11!22;UBERON:0008836!1.55e-11!22;UBERON:0009854!1.63e-10!23;UBERON:0009856!1.63e-10!23;UBERON:0004923!5.11e-10!24;UBERON:0005172!7.70e-10!49;UBERON:0005173!7.70e-10!49;UBERON:0002417!7.70e-10!49;UBERON:0000916!7.70e-10!49;UBERON:0000344!2.99e-08!15;UBERON:0003914!2.05e-07!47;UBERON:0001242!4.15e-07!13;UBERON:0000060!4.15e-07!13;UBERON:0001262!4.15e-07!13;UBERON:0004786!4.15e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.21e-19,22;UBERON:0007499,5.21e-19,22;UBERON:0006925,5.21e-19,22;UBERON:0009497,5.21e-19,22;UBERON:0000015,5.21e-19,22;UBERON:0002423,5.21e-19,22;UBERON:0006235,5.21e-19,22;UBERON:0008835,5.21e-19,22;UBERON:0003894,5.21e-19,22;UBERON:0004161,5.21e-19,22;UBERON:0008836,5.21e-19,22;UBERON:0002365,3.12e-18,25;UBERON:0002330,3.12e-18,25;UBERON:0009854,6.24e-18,23;UBERON:0009856,6.24e-18,23;UBERON:0005172,2.57e-15,49;UBERON:0005173,2.57e-15,49;UBERON:0002417,2.57e-15,49;UBERON:0000916,2.57e-15,49;UBERON:0003914,9.80e-13,47;UBERON:0004923,4.35e-11,24;UBERON:0003104,1.82e-10,61;UBERON:0009142,1.82e-10,61;UBERON:0004119,2.76e-10,118;UBERON:0000925,2.76e-10,118;UBERON:0006595,2.76e-10,118;UBERON:0005256,4.85e-10,45;UBERON:0001007,7.52e-10,116;UBERON:0001555,7.52e-10,116;UBERON:0007026,7.52e-10,116;UBERON:0003929,1.08e-09,55;UBERON:0000344,1.37e-09,15;UBERON:0009569,2.47e-09,66;UBERON:0000490,4.18e-09,66;UBERON:0004921,1.21e-08,114;UBERON:0005177,7.77e-08,79;UBERON:0002100,1.07e-07,90;UBERON:0001242,1.56e-07,13;UBERON:0001262,1.56e-07,13;UBERON:0004786,1.56e-07,13|phase1_expression=0,3.14077866875425,2.27499619694768,5.14189159221611,5.00895729946347,1.17515490338323,1.86890112476421,0,0,0,0,0,0,0,0.666219523631325,1.61980213911861,0.699561878128147,0.157731082679119,0,0,0.510259740906419,0,0,2.71987118748791,2.06468352960453,2.8711598205751,2.15380998079537,1.939241094173,2.28028103347649,1.26015064879965,0.665191531965914,0.635030673459631,0,0,0.577703239502549,0.664938581433969,0.612508068787107,1.25559489221072,0,1.0470474879476,0.588231488031014,0.683045484958446,0,0.125896817975577,0,0.367093504323363,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,1.03134418455488,0.202316460859598,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0,0.285650984403804,0,0,0.0958454710182364,0,0,0,0,0,0.182975287204819,0,0.837548997004143,0,0.15279824777681,0,0,0,0.151452386666368,0.151143120213571,0,3.44169550792555,4.75979933595425,6.47643829965381,5.84798775702902,5.82434953226536,2.66844398250329,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0,0,2.74041311325744,0,0.148442139064825,0,0,0,0.150722640552623,0,0.125666591329675,1.73036477414062,2.74738778147832,0.884610551949874,0.323533699894818,0.662524555381181,0,0,0.292780797011547,0,2.29911349687732,0,0,0,0.299581278809645,0,0.251308704225729,0.173824320192276,0,0,0,0,0.746441823660558,1.51633655060205,1.05220927943237,0.260240885925407,0,0,0.150704817835715,0.204109497453984,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0.414251545071004,0,0,0,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0,0.656669856316381,1.13496333364198,1.16959989940266,1.3173006917463,1.74468344388483,0,0,4.62586296177317,2.90895623329899,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0.380451252225118,0.949058123089023,0.988193728344065,0.754005626400808,0.596869416123452,0.38992817423824,0,2.37751854862164,1.7922714592893,0.189667900953082,0.114248512609729,0,2.24016460629846,0.775809948670503,0.49095073923223,1.70738650235495,4.13308414342886,4.39596437955849,4.44229790118482,6.81841042300442,0.83422552858047,1.17935397067922,1.12431056192427,1.01430060694251,1.92941727801933,1.78238096246994,0.863088412352432,1.94562272130042,1.37280706594041,1.43768206527355,1.48856379067401,1.87222603868736,4.04126204715379,4.84373016509163,3.85954817090694,0.369506380333209,0.189491411770485,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0.54390568381871,0.983528546038072,0.551873492609465,0.160550589987792,0,0.163934945376675,3.28212205365685,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0,0.642642632843614,0.425820255624806,0.178065603667255,0.162886959353576,0.329940245945071,0,0.242780636154981,0,0,0.590603785761546,0,0.258428293168221,0,0,0.316036757935816,1.05418608574999,1.03135543248187,0,0,0,0,0,0,0,0,0.469343416127421,2.1183207086382,0.441056796109924,0.8244312647074,0.161464426695906,0.180938774784468,0.358117032009409,0.328281799490123,0.874442509889552,0.18542530201051,1.02522528478712,0,0.370389054739423,1.88368457004691,0.956859594047176,2.0590035588587,0,0,0,1.90934123603023,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0.539457385539283,0.578574190077352,0.785267825952089,1.42576470620972,4.34937519160848,0,0,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0.2604087696879,0.209718688851422,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0405734525369,0.221985953374065,0.448569283047378,0.671538465456314,0.965947970160952,0.187682475451182,0.549454872801795,0.428736758158132,0,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0,0.735374033800057,0,0.206035057238894,0.64183841918363,0.505394423527595,0.25347929989024,0.565879024158229,0.187283014939765,0.448176066834085,0.516919220600519,0,0.231768651889711,0.38581844092741,0.824171801606613,0.441596760403192,0,0.354951612318675,0.238436189947321,0.290692833264657,0.564656282491984,0.676916863133412,0.73171189149109,0.263069711437843,0.271608227691724,1.68342681497322,0.237270036248348,0.591026894253381,0,0.77468420592983,0,0,0.233931608445408,0.429742108096597,0.191288332068843,1.10295709559758,1.39120701372253|short_description=p6@Stradb}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:227154 | |||
|HGNC= | |||
|MCL_coexpression_id=369 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8K4T3 | |||
|association_with_transcript=119bp_to_NM_172656,uc007bcw.1,uc007bcx.1,uc007bcy.1,uc007bcz.1_5end | |||
|cluster_id=chr1:59030534..59030545,+ | |||
|description=CAGE_peak_6_at_Stradb_5end | |||
|id=chr1:59030534..59030545,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.58e-08,6;CL:0000677,1.58e-08,6;CL:0000584,1.58e-08,6;CL:0000066,1.77e-07,25;CL:0000075,3.69e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!1.25e-12!25;UBERON:0002330!1.25e-12!25;UBERON:0002107!1.55e-11!22;UBERON:0007499!1.55e-11!22;UBERON:0006925!1.55e-11!22;UBERON:0009497!1.55e-11!22;UBERON:0000015!1.55e-11!22;UBERON:0002423!1.55e-11!22;UBERON:0006235!1.55e-11!22;UBERON:0008835!1.55e-11!22;UBERON:0003894!1.55e-11!22;UBERON:0004161!1.55e-11!22;UBERON:0008836!1.55e-11!22;UBERON:0009854!1.63e-10!23;UBERON:0009856!1.63e-10!23;UBERON:0004923!5.11e-10!24;UBERON:0005172!7.70e-10!49;UBERON:0005173!7.70e-10!49;UBERON:0002417!7.70e-10!49;UBERON:0000916!7.70e-10!49;UBERON:0000344!2.99e-08!15;UBERON:0003914!2.05e-07!47;UBERON:0001242!4.15e-07!13;UBERON:0000060!4.15e-07!13;UBERON:0001262!4.15e-07!13;UBERON:0004786!4.15e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.21e-19,22;UBERON:0007499,5.21e-19,22;UBERON:0006925,5.21e-19,22;UBERON:0009497,5.21e-19,22;UBERON:0000015,5.21e-19,22;UBERON:0002423,5.21e-19,22;UBERON:0006235,5.21e-19,22;UBERON:0008835,5.21e-19,22;UBERON:0003894,5.21e-19,22;UBERON:0004161,5.21e-19,22;UBERON:0008836,5.21e-19,22;UBERON:0002365,3.12e-18,25;UBERON:0002330,3.12e-18,25;UBERON:0009854,6.24e-18,23;UBERON:0009856,6.24e-18,23;UBERON:0005172,2.57e-15,49;UBERON:0005173,2.57e-15,49;UBERON:0002417,2.57e-15,49;UBERON:0000916,2.57e-15,49;UBERON:0003914,9.80e-13,47;UBERON:0004923,4.35e-11,24;UBERON:0003104,1.82e-10,61;UBERON:0009142,1.82e-10,61;UBERON:0004119,2.76e-10,118;UBERON:0000925,2.76e-10,118;UBERON:0006595,2.76e-10,118;UBERON:0005256,4.85e-10,45;UBERON:0001007,7.52e-10,116;UBERON:0001555,7.52e-10,116;UBERON:0007026,7.52e-10,116;UBERON:0003929,1.08e-09,55;UBERON:0000344,1.37e-09,15;UBERON:0009569,2.47e-09,66;UBERON:0000490,4.18e-09,66;UBERON:0004921,1.21e-08,114;UBERON:0005177,7.77e-08,79;UBERON:0002100,1.07e-07,90;UBERON:0001242,1.56e-07,13;UBERON:0001262,1.56e-07,13;UBERON:0004786,1.56e-07,13 | |||
|phase1_expression=0,3.14077866875425,2.27499619694768,5.14189159221611,5.00895729946347,1.17515490338323,1.86890112476421,0,0,0,0,0,0,0,0.666219523631325,1.61980213911861,0.699561878128147,0.157731082679119,0,0,0.510259740906419,0,0,2.71987118748791,2.06468352960453,2.8711598205751,2.15380998079537,1.939241094173,2.28028103347649,1.26015064879965,0.665191531965914,0.635030673459631,0,0,0.577703239502549,0.664938581433969,0.612508068787107,1.25559489221072,0,1.0470474879476,0.588231488031014,0.683045484958446,0,0.125896817975577,0,0.367093504323363,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,1.03134418455488,0.202316460859598,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0,0.285650984403804,0,0,0.0958454710182364,0,0,0,0,0,0.182975287204819,0,0.837548997004143,0,0.15279824777681,0,0,0,0.151452386666368,0.151143120213571,0,3.44169550792555,4.75979933595425,6.47643829965381,5.84798775702902,5.82434953226536,2.66844398250329,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0,0,2.74041311325744,0,0.148442139064825,0,0,0,0.150722640552623,0,0.125666591329675,1.73036477414062,2.74738778147832,0.884610551949874,0.323533699894818,0.662524555381181,0,0,0.292780797011547,0,2.29911349687732,0,0,0,0.299581278809645,0,0.251308704225729,0.173824320192276,0,0,0,0,0.746441823660558,1.51633655060205,1.05220927943237,0.260240885925407,0,0,0.150704817835715,0.204109497453984,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0.414251545071004,0,0,0,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0,0.656669856316381,1.13496333364198,1.16959989940266,1.3173006917463,1.74468344388483,0,0,4.62586296177317,2.90895623329899,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0.380451252225118,0.949058123089023,0.988193728344065,0.754005626400808,0.596869416123452,0.38992817423824,0,2.37751854862164,1.7922714592893,0.189667900953082,0.114248512609729,0,2.24016460629846,0.775809948670503,0.49095073923223,1.70738650235495,4.13308414342886,4.39596437955849,4.44229790118482,6.81841042300442,0.83422552858047,1.17935397067922,1.12431056192427,1.01430060694251,1.92941727801933,1.78238096246994,0.863088412352432,1.94562272130042,1.37280706594041,1.43768206527355,1.48856379067401,1.87222603868736,4.04126204715379,4.84373016509163,3.85954817090694,0.369506380333209,0.189491411770485,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0.54390568381871,0.983528546038072,0.551873492609465,0.160550589987792,0,0.163934945376675,3.28212205365685,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0,0.642642632843614,0.425820255624806,0.178065603667255,0.162886959353576,0.329940245945071,0,0.242780636154981,0,0,0.590603785761546,0,0.258428293168221,0,0,0.316036757935816,1.05418608574999,1.03135543248187,0,0,0,0,0,0,0,0,0.469343416127421,2.1183207086382,0.441056796109924,0.8244312647074,0.161464426695906,0.180938774784468,0.358117032009409,0.328281799490123,0.874442509889552,0.18542530201051,1.02522528478712,0,0.370389054739423,1.88368457004691,0.956859594047176,2.0590035588587,0,0,0,1.90934123603023,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0.539457385539283,0.578574190077352,0.785267825952089,1.42576470620972,4.34937519160848,0,0,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0.2604087696879,0.209718688851422,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0405734525369,0.221985953374065,0.448569283047378,0.671538465456314,0.965947970160952,0.187682475451182,0.549454872801795,0.428736758158132,0,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0,0.735374033800057,0,0.206035057238894,0.64183841918363,0.505394423527595,0.25347929989024,0.565879024158229,0.187283014939765,0.448176066834085,0.516919220600519,0,0.231768651889711,0.38581844092741,0.824171801606613,0.441596760403192,0,0.354951612318675,0.238436189947321,0.290692833264657,0.564656282491984,0.676916863133412,0.73171189149109,0.263069711437843,0.271608227691724,1.68342681497322,0.237270036248348,0.591026894253381,0,0.77468420592983,0,0,0.233931608445408,0.429742108096597,0.191288332068843,1.10295709559758,1.39120701372253 | |||
|short_description=p6@Stradb | |||
}} |
Revision as of 19:31, 5 August 2015
Short description: | p6@Stradb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Stradb_5end |
Coexpression cluster: | MCL_coexpression_mm9:369 |
Association with transcript: | 119bp_to_NM_172656, uc007bcw.1, uc007bcx.1, uc007bcy.1, uc007bcz.1_5end |
EntrezGene: | 227154 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.58e-08 | 6 |
gut absorptive cell | 1.58e-08 | 6 |
enterocyte | 1.58e-08 | 6 |
epithelial cell | 1.77e-07 | 25 |
columnar/cuboidal epithelial cell | 3.69e-07 | 7 |