FFCP PHASE1:Mm9::chr13:23931446..23931456,+: Difference between revisions
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{{FFCP|EntrezGene=105355|HGNC=|MCL_coexpression_id=338|UniProt=Q5SZ92|association_with_transcript=99bp_to_ENSMUST00000110422_5end|description=CAGE_peak_4_at_Slc17a3_5end|id=chr13:23931446..23931456,+|ontology_enrichment_celltype=CL:0000181!3.85e-09!5;CL:0000417!3.85e-09!5;CL:0000668!3.85e-09!5;CL:0000412!3.85e-09!5;CL:0000182!3.85e-09!5|ontology_enrichment_celltype_v019_2=CL:0000182,3.46e-11,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!4.84e-24!22;UBERON:0007499!4.84e-24!22;UBERON:0006925!4.84e-24!22;UBERON:0009497!4.84e-24!22;UBERON:0000015!4.84e-24!22;UBERON:0002423!4.84e-24!22;UBERON:0006235!4.84e-24!22;UBERON:0008835!4.84e-24!22;UBERON:0003894!4.84e-24!22;UBERON:0004161!4.84e-24!22;UBERON:0008836!4.84e-24!22;UBERON:0009854!7.57e-23!23;UBERON:0009856!7.57e-23!23;UBERON:0005172!4.84e-22!49;UBERON:0005173!4.84e-22!49;UBERON:0002417!4.84e-22!49;UBERON:0000916!4.84e-22!49;UBERON:0002365!9.56e-21!25;UBERON:0002330!9.56e-21!25;UBERON:0009569!4.63e-15!66;UBERON:0005177!1.42e-10!85;UBERON:0003914!1.82e-09!47;UBERON:0005256!1.82e-09!47;UBERON:0002113!5.44e-09!14;UBERON:0003918!5.44e-09!14;UBERON:0005095!5.44e-09!14;UBERON:0007687!5.44e-09!14;UBERON:0002100!1.62e-08!98;UBERON:0005057!1.81e-08!51;UBERON:0006554!9.89e-08!16;UBERON:0003929!1.28e-07!55;UBERON:0001008!3.26e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0005172,6.16e-16,49;UBERON:0005173,6.16e-16,49;UBERON:0002417,6.16e-16,49;UBERON:0000916,6.16e-16,49;UBERON:0002113,8.30e-15,14;UBERON:0003918,8.30e-15,14;UBERON:0011143,8.30e-15,14;UBERON:0005095,8.30e-15,14;UBERON:0007687,8.30e-15,14;UBERON:0003104,1.62e-12,61;UBERON:0009142,1.62e-12,61;UBERON:0009569,1.87e-11,66;UBERON:0006554,1.90e-11,18;UBERON:0001008,7.92e-11,19;UBERON:0000489,9.19e-10,21;UBERON:0002107,2.15e-09,22;UBERON:0007499,2.15e-09,22;UBERON:0006925,2.15e-09,22;UBERON:0009497,2.15e-09,22;UBERON:0000015,2.15e-09,22;UBERON:0002423,2.15e-09,22;UBERON:0006235,2.15e-09,22;UBERON:0008835,2.15e-09,22;UBERON:0003894,2.15e-09,22;UBERON:0004161,2.15e-09,22;UBERON:0008836,2.15e-09,22;UBERON:0005177,2.56e-09,79;UBERON:0009854,5.71e-09,23;UBERON:0009856,5.71e-09,23;UBERON:0002365,3.19e-08,25;UBERON:0002330,3.19e-08,25;UBERON:0002100,5.48e-08,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,1.3599426674155,0.539703191637817,3.24888208723835,2.24013443548668,2.24711072210803,0,0,0,0,0,0,0,0,0,0,3.76806803072898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4255592949172,0.581857461502877,1.47285221769669,1.01178459398812,2.95220295959204,5.65195420228949,3.08492909804501,1.48226313543574,0,0,0.224862112384854,0.405720242777006,0,0,0.575392274901621,0.162135226775035,0.274561413188081,5.75072826109418,0,0.312037673114561,0.757736633841335,1.61457672169721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.229741875822453,0,0,0,0.412085900803307,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.169229215783353,0,0.263069711437843,0,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0|short_description=p4@Slc17a3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:105355 | |||
|HGNC= | |||
|MCL_coexpression_id=338 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q5SZ92 | |||
|association_with_transcript=99bp_to_ENSMUST00000110422_5end | |||
|cluster_id=chr13:23931446..23931456,+ | |||
|description=CAGE_peak_4_at_Slc17a3_5end | |||
|id=chr13:23931446..23931456,+ | |||
|ontology_enrichment_celltype=CL:0000181!3.85e-09!5;CL:0000417!3.85e-09!5;CL:0000668!3.85e-09!5;CL:0000412!3.85e-09!5;CL:0000182!3.85e-09!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.46e-11,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.84e-24!22;UBERON:0007499!4.84e-24!22;UBERON:0006925!4.84e-24!22;UBERON:0009497!4.84e-24!22;UBERON:0000015!4.84e-24!22;UBERON:0002423!4.84e-24!22;UBERON:0006235!4.84e-24!22;UBERON:0008835!4.84e-24!22;UBERON:0003894!4.84e-24!22;UBERON:0004161!4.84e-24!22;UBERON:0008836!4.84e-24!22;UBERON:0009854!7.57e-23!23;UBERON:0009856!7.57e-23!23;UBERON:0005172!4.84e-22!49;UBERON:0005173!4.84e-22!49;UBERON:0002417!4.84e-22!49;UBERON:0000916!4.84e-22!49;UBERON:0002365!9.56e-21!25;UBERON:0002330!9.56e-21!25;UBERON:0009569!4.63e-15!66;UBERON:0005177!1.42e-10!85;UBERON:0003914!1.82e-09!47;UBERON:0005256!1.82e-09!47;UBERON:0002113!5.44e-09!14;UBERON:0003918!5.44e-09!14;UBERON:0005095!5.44e-09!14;UBERON:0007687!5.44e-09!14;UBERON:0002100!1.62e-08!98;UBERON:0005057!1.81e-08!51;UBERON:0006554!9.89e-08!16;UBERON:0003929!1.28e-07!55;UBERON:0001008!3.26e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,6.16e-16,49;UBERON:0005173,6.16e-16,49;UBERON:0002417,6.16e-16,49;UBERON:0000916,6.16e-16,49;UBERON:0002113,8.30e-15,14;UBERON:0003918,8.30e-15,14;UBERON:0011143,8.30e-15,14;UBERON:0005095,8.30e-15,14;UBERON:0007687,8.30e-15,14;UBERON:0003104,1.62e-12,61;UBERON:0009142,1.62e-12,61;UBERON:0009569,1.87e-11,66;UBERON:0006554,1.90e-11,18;UBERON:0001008,7.92e-11,19;UBERON:0000489,9.19e-10,21;UBERON:0002107,2.15e-09,22;UBERON:0007499,2.15e-09,22;UBERON:0006925,2.15e-09,22;UBERON:0009497,2.15e-09,22;UBERON:0000015,2.15e-09,22;UBERON:0002423,2.15e-09,22;UBERON:0006235,2.15e-09,22;UBERON:0008835,2.15e-09,22;UBERON:0003894,2.15e-09,22;UBERON:0004161,2.15e-09,22;UBERON:0008836,2.15e-09,22;UBERON:0005177,2.56e-09,79;UBERON:0009854,5.71e-09,23;UBERON:0009856,5.71e-09,23;UBERON:0002365,3.19e-08,25;UBERON:0002330,3.19e-08,25;UBERON:0002100,5.48e-08,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,1.3599426674155,0.539703191637817,3.24888208723835,2.24013443548668,2.24711072210803,0,0,0,0,0,0,0,0,0,0,3.76806803072898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4255592949172,0.581857461502877,1.47285221769669,1.01178459398812,2.95220295959204,5.65195420228949,3.08492909804501,1.48226313543574,0,0,0.224862112384854,0.405720242777006,0,0,0.575392274901621,0.162135226775035,0.274561413188081,5.75072826109418,0,0.312037673114561,0.757736633841335,1.61457672169721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.229741875822453,0,0,0,0.412085900803307,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.169229215783353,0,0.263069711437843,0,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |||
|short_description=p4@Slc17a3 | |||
}} |
Revision as of 19:41, 5 August 2015
Short description: | p4@Slc17a3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Slc17a3_5end |
Coexpression cluster: | MCL_coexpression_mm9:338 |
Association with transcript: | 99bp_to_ENSMUST00000110422_5end |
EntrezGene: | 105355 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.46e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
abdomen element | 6.16e-16 | 49 |
abdominal segment element | 6.16e-16 | 49 |
abdominal segment of trunk | 6.16e-16 | 49 |
abdomen | 6.16e-16 | 49 |
kidney | 8.30e-15 | 14 |
kidney mesenchyme | 8.30e-15 | 14 |
upper urinary tract | 8.30e-15 | 14 |
kidney rudiment | 8.30e-15 | 14 |
kidney field | 8.30e-15 | 14 |
mesenchyme | 1.62e-12 | 61 |
entire embryonic mesenchyme | 1.62e-12 | 61 |
subdivision of trunk | 1.87e-11 | 66 |
urinary system structure | 1.90e-11 | 18 |
renal system | 7.92e-11 | 19 |
cavitated compound organ | 9.19e-10 | 21 |
liver | 2.15e-09 | 22 |
epithelial sac | 2.15e-09 | 22 |
digestive gland | 2.15e-09 | 22 |
epithelium of foregut-midgut junction | 2.15e-09 | 22 |
anatomical boundary | 2.15e-09 | 22 |
hepatobiliary system | 2.15e-09 | 22 |
foregut-midgut junction | 2.15e-09 | 22 |
hepatic diverticulum | 2.15e-09 | 22 |
liver primordium | 2.15e-09 | 22 |
septum transversum | 2.15e-09 | 22 |
liver bud | 2.15e-09 | 22 |
trunk region element | 2.56e-09 | 79 |
digestive tract diverticulum | 5.71e-09 | 23 |
sac | 5.71e-09 | 23 |
exocrine gland | 3.19e-08 | 25 |
exocrine system | 3.19e-08 | 25 |
trunk | 5.48e-08 | 90 |