FFCP PHASE1:Mm9::chr6:48490487..48490499,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:48490487..48490499,+
|short_description=p@chr6:48490487..48490499,+
|description=CAGE_peak_at_chr6:48490487..48490499,+
|association_with_transcript=NA
|E...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=791 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:48490487..48490499,+ | |||
|description=CAGE_peak_at_chr6:48490487..48490499,+ | |||
|id=chr6:48490487..48490499,+ | |||
|ontology_enrichment_celltype=CL:0002319!3.65e-18!43;CL:0000221!1.99e-17!44;CL:0000133!1.99e-17!44;CL:0000055!3.78e-17!50;CL:0000540!9.62e-15!33;CL:0000047!9.62e-15!33;CL:0000031!9.62e-15!33;CL:0000404!9.62e-15!33;CL:0000393!2.72e-14!39;CL:0000211!2.72e-14!39;CL:0000117!1.38e-10!23;CL:0000337!1.38e-10!23;CL:0002321!2.57e-08!70;CL:0000220!2.57e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000878,2.90e-14,2;CL:0000129,2.90e-14,2;CL:0002453,5.72e-08,8;CL:0002194,1.43e-07,4;CL:0000766,1.43e-07,4;CL:0000234,1.43e-07,4;CL:0000576,1.43e-07,4;CL:0000235,1.43e-07,4;CL:0000864,1.43e-07,4;CL:0002009,1.43e-07,4;CL:0000040,1.43e-07,4;CL:0000559,1.43e-07,4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.22e-35!75;UBERON:0001016!2.22e-35!75;UBERON:0001017!4.36e-35!73;UBERON:0005743!4.36e-35!73;UBERON:0004121!4.31e-33!102;UBERON:0000924!4.31e-33!102;UBERON:0006601!4.31e-33!102;UBERON:0002346!1.81e-24!71;UBERON:0003075!1.81e-24!71;UBERON:0007284!1.81e-24!71;UBERON:0001049!9.89e-24!52;UBERON:0005068!9.89e-24!52;UBERON:0006241!9.89e-24!52;UBERON:0007135!9.89e-24!52;UBERON:0000033!2.34e-21!63;UBERON:0000955!8.11e-21!50;UBERON:0006238!8.11e-21!50;UBERON:0002616!5.75e-20!49;UBERON:0002020!1.32e-17!34;UBERON:0003080!1.78e-16!40;UBERON:0003056!4.45e-16!49;UBERON:0002780!1.08e-15!39;UBERON:0001890!1.08e-15!39;UBERON:0006240!1.08e-15!39;UBERON:0002791!6.34e-14!29;UBERON:0003528!6.34e-14!29;UBERON:0001893!6.34e-14!29;UBERON:0007811!6.62e-11!86;UBERON:0000956!1.69e-09!21;UBERON:0001869!1.69e-09!21;UBERON:0000203!1.69e-09!21;UBERON:0002619!2.38e-09!17;UBERON:0000153!3.94e-09!94;UBERON:0003076!5.57e-08!12;UBERON:0003057!5.57e-08!12;UBERON:0002021!4.19e-07!10;UBERON:0000411!4.19e-07!10;UBERON:0001950!4.19e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.11e-09,73;UBERON:0000013,2.90e-09,3;UBERON:0001016,4.08e-09,75;UBERON:0004121,2.48e-08,95;UBERON:0000924,2.48e-08,95;UBERON:0006601,2.48e-08,95;UBERON:0001851,3.16e-07,1;UBERON:0005889,3.16e-07,1 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.608261587317087,0,0,0.436050312760893,0.878744730937887,0.777719596297134,0,1.43752564364972,0,0,0,0,0,0.515672092277442,0.809265843438391,0.528990979272033,0.633831403506179,0,0,0.899899717281399,0,0,2.09720077362883,6.14749288514487,0,0.405017814995072,0.210324961351382,0.856952953211411,1.10434270475807,0.367472397644862,0.191690942036473,0,0,0.638436690425939,0.768032666281217,0.395658863190582,0.731901148819277,0.52091337055676,0.279182999001381,0.56276261003168,0.916789486660861,0.589257170947335,1.56608848879013,0.372798891650601,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0,0.304465478312141,0,0,0.470354828542819,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0,0,0.878342391034642,9.42510180660548,0,0,0,0,0.898743836428936,0.457500602818626,0.251308704225729,0.173824320192276,1.02286182932132,0.20778804455956,0.486723789203273,0.101839363850316,0,0.758168275301024,0,0.260240885925407,0,0,0,0.204109497453984,0.384341160854549,0.187403449119458,1.03481348295606,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.308713837137853,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0.432276099749388,0,0,0,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0.345369963731791,0,0,0.54390568381871,0,0,0.481651769963376,0.586058432961016,0,0.757412781613119,0.315508219416257,0.390438744296638,0.215423397732799,0.716906393857656,0.445597348164788,0,1.21443210502468,0.584511715822624,1.18586333383957,0.963963949265421,0.851640511249612,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0,0.354680467284547,0.178368817602071,0.164549020602121,1.2178597964584,0,0.21183207086382,0,0,0.322928853391811,0,0.238744688006273,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0.621339313086926,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,1.14579102687879,0.859265911718438,0.685082519770642,0.755393897389701,2.02506750069542,0.45032120322422,0.906284817968409,0,0,1.19707462020309,0,0,0,0,0.222246727801615,0,0,0,0,0,0.280924522409647,0.192075457214608,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0.463735671240843 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.608261587317087,0,0,0.436050312760893,0.878744730937887,0.777719596297134,0,1.43752564364972,0,0,0,0,0,0.515672092277442,0.809265843438391,0.528990979272033,0.633831403506179,0,0,0.899899717281399,0,0,2.09720077362883,6.14749288514487,0,0.405017814995072,0.210324961351382,0.856952953211411,1.10434270475807,0.367472397644862,0.191690942036473,0,0,0.638436690425939,0.768032666281217,0.395658863190582,0.731901148819277,0.52091337055676,0.279182999001381,0.56276261003168,0.916789486660861,0.589257170947335,1.56608848879013,0.372798891650601,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0,0.304465478312141,0,0,0.470354828542819,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0,0,0.878342391034642,9.42510180660548,0,0,0,0,0.898743836428936,0.457500602818626,0.251308704225729,0.173824320192276,1.02286182932132,0.20778804455956,0.486723789203273,0.101839363850316,0,0.758168275301024,0,0.260240885925407,0,0,0,0.204109497453984,0.384341160854549,0.187403449119458,1.03481348295606,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.308713837137853,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0.432276099749388,0,0,0,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0.345369963731791,0,0,0.54390568381871,0,0,0.481651769963376,0.586058432961016,0,0.757412781613119,0.315508219416257,0.390438744296638,0.215423397732799,0.716906393857656,0.445597348164788,0,1.21443210502468,0.584511715822624,1.18586333383957,0.963963949265421,0.851640511249612,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0,0.354680467284547,0.178368817602071,0.164549020602121,1.2178597964584,0,0.21183207086382,0,0,0.322928853391811,0,0.238744688006273,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0.621339313086926,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,1.14579102687879,0.859265911718438,0.685082519770642,0.755393897389701,2.02506750069542,0.45032120322422,0.906284817968409,0,0,1.19707462020309,0,0,0,0,0.222246727801615,0,0,0,0,0,0.280924522409647,0.192075457214608,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0.463735671240843 | ||
|short_description=p@chr6:48490487..48490499,+ | |||
}} | }} |
Latest revision as of 19:53, 5 August 2015
Short description: | p@chr6:48490487..48490499, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:48490487..48490499, + |
Coexpression cluster: | MCL_coexpression_mm9:791 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system macrophage | 2.90e-14 | 2 |
microglial cell | 2.90e-14 | 2 |
oligodendrocyte precursor cell | 5.72e-08 | 8 |
monopoietic cell | 1.43e-07 | 4 |
myeloid leukocyte | 1.43e-07 | 4 |
phagocyte | 1.43e-07 | 4 |
monocyte | 1.43e-07 | 4 |
macrophage | 1.43e-07 | 4 |
tissue-resident macrophage | 1.43e-07 | 4 |
macrophage dendritic cell progenitor | 1.43e-07 | 4 |
monoblast | 1.43e-07 | 4 |
promonocyte | 1.43e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.11e-09 | 73 |
sympathetic nervous system | 2.90e-09 | 3 |
nervous system | 4.08e-09 | 75 |
ectoderm-derived structure | 2.48e-08 | 95 |
ectoderm | 2.48e-08 | 95 |
presumptive ectoderm | 2.48e-08 | 95 |
cortex | 3.16e-07 | 1 |
zygote cortex | 3.16e-07 | 1 |