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FFCP PHASE1:Mm9::chr9:99469059..99469097,-: Difference between revisions

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{{FFCP|EntrezGene=74125|HGNC=|MCL_coexpression_id=726|UniProt=G3X920,Q9DBR3|association_with_transcript=220bp_to_ENSMUST00000035043,NM_001166138,NM_028768,uc009ref.2,uc009reg.1,uc009reh.1_5end|description=CAGE_peak_1_at_Armc8_5end|id=chr9:99469059..99469097,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!5.07e-12!86;UBERON:0000153!1.53e-11!94;UBERON:0000033!1.64e-10!63;UBERON:0003056!7.64e-10!49;UBERON:0002346!1.90e-09!71;UBERON:0003075!1.90e-09!71;UBERON:0007284!1.90e-09!71;UBERON:0001049!4.46e-08!52;UBERON:0005068!4.46e-08!52;UBERON:0006241!4.46e-08!52;UBERON:0007135!4.46e-08!52;UBERON:0002020!2.25e-07!34;UBERON:0000955!2.65e-07!50;UBERON:0006238!2.65e-07!50;UBERON:0003080!3.62e-07!40;UBERON:0002021!3.70e-07!10;UBERON:0000411!3.70e-07!10;UBERON:0001950!3.70e-07!10;UBERON:0002616!7.96e-07!49;UBERON:0002780!8.15e-07!39;UBERON:0001890!8.15e-07!39;UBERON:0006240!8.15e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.37e-12,92;UBERON:0002346,4.65e-10,64;UBERON:0003075,4.65e-10,64;UBERON:0007284,4.65e-10,64;UBERON:0003056,7.64e-10,49;UBERON:0010371,1.66e-09,73;UBERON:0001049,4.46e-08,52;UBERON:0005068,4.46e-08,52;UBERON:0006241,4.46e-08,52;UBERON:0007135,4.46e-08,52;UBERON:0000073,1.06e-07,54;UBERON:0000955,1.42e-07,47;UBERON:0006238,1.42e-07,47;UBERON:0002020,2.25e-07,34;UBERON:0003080,3.62e-07,40;UBERON:0002021,3.70e-07,10;UBERON:0000411,3.70e-07,10;UBERON:0001950,3.70e-07,10;UBERON:0002616,4.44e-07,46;UBERON:0002780,8.15e-07,39;UBERON:0001890,8.15e-07,39;UBERON:0006240,8.15e-07,39|phase1_expression=28.6666436317581,5.93258192986914,7.27998783023258,3.93203474698879,4.00716583957078,11.5836697619204,8.87728034262997,34.9924206526672,29.2840542075467,21.7680009479454,41.0923123741212,51.3732703929966,31.3297335774106,37.5033526377499,11.3257319017325,19.4376256694233,11.8925519281785,38.3286530910259,39.2147280112413,29.7072756258621,40.9058225626646,16.3830069481461,15.4107875591972,10.3995074815714,12.8469197397615,9.18771142584032,6.46142994238612,9.69620547086501,13.1116159424898,13.3575968772763,11.3082560434205,8.89042942843484,9.22597181376855,0,18.4865036640816,19.7819227976606,19.1919194886627,26.7860243671621,21.0960543021426,29.3173296625327,21.7645650571475,22.5405010036287,30.1016418879315,20.5211813300191,17.8423398946346,17.0698479510364,3.9119567217402,8.72100625521786,7.90870257844099,8.55491555926847,6.57936181639204,1.43752564364972,31.0397821206812,23.211588544363,31.9289109185341,12.6057123657614,13.4670716771216,11.8604581223812,29.5382032855013,35.9713865904982,27.2547503507657,4.40497891689872,7.11435836888911,7.64914759689189,6.92206453796882,2.8419204597844,3.59520132622086,6.53171119046643,29.0330914463737,23.8960510847092,23.135745748652,24.2803336743233,25.8416192913388,32.8275341896077,28.2744139503797,18.3843757322004,20.9220173898839,30.6449611404451,28.1099955858926,29.8063010270238,42.3587789879157,35.4221091978597,20.1011759280994,37.7050948721226,29.9484565642548,39.7748590389451,60.0808492972214,41.9398753106926,22.5664056132888,17.608173504881,28.1168554040627,11.185510400758,1.3599426674155,1.07940638327563,6.49776417447669,6.2723764193627,20.0835520788405,17.724753548118,13.2490862347463,11.6602059588412,28.8729010542195,15.3991772897181,5.09610479413291,0,12.123498296628,10.387754484479,9.60496445528088,15.5290076417922,72.5026074212081,34.735460541169,18.7364152907427,22.5304453950985,20.2941637585331,30.8981413132876,32.8072492908616,24.8819850832757,33.6185156118748,30.2212655962615,28.307537662396,34.6181058887456,32.9053862505986,36.8505192382769,11.1835056730873,57.3850362142632,75.6102611596573,20.6920214718959,21.3270921620538,13.197860081855,19.4417447421789,37.8970317694201,44.3775584734068,53.0261365916288,54.5808365403748,60.6045633872883,39.8953045554355,44.1296235544301,27.0892707841841,27.7427544460507,26.2831668771022,35.7751155007006,25.893968149578,28.9676651586176,31.8709969755468,44.6086260793717,48.2378778982915,56.8824918064733,46.663458830745,46.0491999915448,18.9699833780901,24.3946843416487,24.9850596312807,20.1660073833369,29.1949611686878,24.0293994900295,32.5135775524551,28.262865888226,18.2575428701441,17.2423097766859,19.6072814582959,25.0622184767957,26.735970837845,25.9289368503861,31.7237945684182,35.0240332510379,33.6302306094485,37.2054311600653,34.8755421819505,39.5834510624705,34.7221283317444,47.4443971188585,42.8043314402118,47.076395950957,44.1295731735012,38.9198614405078,58.2503157522632,55.7742999095722,22.1380584599145,16.6603856998033,22.82184280727,34.8355007790658,30.7993232559803,27.8323263980213,24.016828735246,22.446623881282,16.6085171540579,23.8813484349816,25.6361912976275,25.6653848933085,26.5151158482003,22.4704852163555,17.5071820398502,20.9098336917086,14.9837641752935,28.7906251776517,32.6852433451933,33.8061204223222,29.0928730751439,28.2647354157984,34.2742031213474,33.21228329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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:74125
|HGNC=
|MCL_coexpression_id=726
|TSSclassifier=NA
|UniProt=uniprot:G3X920,uniprot:Q9DBR3
|association_with_transcript=220bp_to_ENSMUST00000035043,NM_001166138,NM_028768,uc009ref.2,uc009reg.1,uc009reh.1_5end
|cluster_id=chr9:99469059..99469097,-
|description=CAGE_peak_1_at_Armc8_5end
|id=chr9:99469059..99469097,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!5.07e-12!86;UBERON:0000153!1.53e-11!94;UBERON:0000033!1.64e-10!63;UBERON:0003056!7.64e-10!49;UBERON:0002346!1.90e-09!71;UBERON:0003075!1.90e-09!71;UBERON:0007284!1.90e-09!71;UBERON:0001049!4.46e-08!52;UBERON:0005068!4.46e-08!52;UBERON:0006241!4.46e-08!52;UBERON:0007135!4.46e-08!52;UBERON:0002020!2.25e-07!34;UBERON:0000955!2.65e-07!50;UBERON:0006238!2.65e-07!50;UBERON:0003080!3.62e-07!40;UBERON:0002021!3.70e-07!10;UBERON:0000411!3.70e-07!10;UBERON:0001950!3.70e-07!10;UBERON:0002616!7.96e-07!49;UBERON:0002780!8.15e-07!39;UBERON:0001890!8.15e-07!39;UBERON:0006240!8.15e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.37e-12,92;UBERON:0002346,4.65e-10,64;UBERON:0003075,4.65e-10,64;UBERON:0007284,4.65e-10,64;UBERON:0003056,7.64e-10,49;UBERON:0010371,1.66e-09,73;UBERON:0001049,4.46e-08,52;UBERON:0005068,4.46e-08,52;UBERON:0006241,4.46e-08,52;UBERON:0007135,4.46e-08,52;UBERON:0000073,1.06e-07,54;UBERON:0000955,1.42e-07,47;UBERON:0006238,1.42e-07,47;UBERON:0002020,2.25e-07,34;UBERON:0003080,3.62e-07,40;UBERON:0002021,3.70e-07,10;UBERON:0000411,3.70e-07,10;UBERON:0001950,3.70e-07,10;UBERON:0002616,4.44e-07,46;UBERON:0002780,8.15e-07,39;UBERON:0001890,8.15e-07,39;UBERON:0006240,8.15e-07,39
|phase1_expression=28.6666436317581,5.93258192986914,7.27998783023258,3.93203474698879,4.00716583957078,11.5836697619204,8.87728034262997,34.9924206526672,29.2840542075467,21.7680009479454,41.0923123741212,51.3732703929966,31.3297335774106,37.5033526377499,11.3257319017325,19.4376256694233,11.8925519281785,38.3286530910259,39.2147280112413,29.7072756258621,40.9058225626646,16.3830069481461,15.4107875591972,10.3995074815714,12.8469197397615,9.18771142584032,6.46142994238612,9.69620547086501,13.1116159424898,13.3575968772763,11.3082560434205,8.89042942843484,9.22597181376855,0,18.4865036640816,19.7819227976606,19.1919194886627,26.7860243671621,21.0960543021426,29.3173296625327,21.7645650571475,22.5405010036287,30.1016418879315,20.5211813300191,17.8423398946346,17.0698479510364,3.9119567217402,8.72100625521786,7.90870257844099,8.55491555926847,6.57936181639204,1.43752564364972,31.0397821206812,23.211588544363,31.9289109185341,12.6057123657614,13.4670716771216,11.8604581223812,29.5382032855013,35.9713865904982,27.2547503507657,4.40497891689872,7.11435836888911,7.64914759689189,6.92206453796882,2.8419204597844,3.59520132622086,6.53171119046643,29.0330914463737,23.8960510847092,23.135745748652,24.2803336743233,25.8416192913388,32.8275341896077,28.2744139503797,18.3843757322004,20.9220173898839,30.6449611404451,28.1099955858926,29.8063010270238,42.3587789879157,35.4221091978597,20.1011759280994,37.7050948721226,29.9484565642548,39.7748590389451,60.0808492972214,41.9398753106926,22.5664056132888,17.608173504881,28.1168554040627,11.185510400758,1.3599426674155,1.07940638327563,6.49776417447669,6.2723764193627,20.0835520788405,17.724753548118,13.2490862347463,11.6602059588412,28.8729010542195,15.3991772897181,5.09610479413291,0,12.123498296628,10.387754484479,9.60496445528088,15.5290076417922,72.5026074212081,34.735460541169,18.7364152907427,22.5304453950985,20.2941637585331,30.8981413132876,32.8072492908616,24.8819850832757,33.6185156118748,30.2212655962615,28.307537662396,34.6181058887456,32.9053862505986,36.8505192382769,11.1835056730873,57.3850362142632,75.6102611596573,20.6920214718959,21.3270921620538,13.197860081855,19.4417447421789,37.8970317694201,44.3775584734068,53.0261365916288,54.5808365403748,60.6045633872883,39.8953045554355,44.1296235544301,27.0892707841841,27.7427544460507,26.2831668771022,35.7751155007006,25.893968149578,28.9676651586176,31.8709969755468,44.6086260793717,48.2378778982915,56.8824918064733,46.663458830745,46.0491999915448,18.9699833780901,24.3946843416487,24.9850596312807,20.1660073833369,29.1949611686878,24.0293994900295,32.5135775524551,28.262865888226,18.2575428701441,17.2423097766859,19.6072814582959,25.0622184767957,26.735970837845,25.9289368503861,31.7237945684182,35.0240332510379,33.6302306094485,37.2054311600653,34.8755421819505,39.5834510624705,34.7221283317444,47.4443971188585,42.8043314402118,47.076395950957,44.1295731735012,38.9198614405078,58.2503157522632,55.7742999095722,22.1380584599145,16.6603856998033,22.82184280727,34.8355007790658,30.7993232559803,27.8323263980213,24.016828735246,22.446623881282,16.6085171540579,23.8813484349816,25.6361912976275,25.6653848933085,26.5151158482003,22.4704852163555,17.5071820398502,20.9098336917086,14.9837641752935,28.7906251776517,32.6852433451933,33.8061204223222,29.0928730751439,28.2647354157984,34.2742031213474,33.2122832954105,28.887765922813,26.1601987514217,10.3758419480502,18.5198067344864,18.0834275504147,17.7641068784034,18.0545508035768,19.2941727801933,16.0414286622294,12.3709339103849,18.8076863059041,15.1008777253445,21.5652309791032,21.2120340171047,19.6583734062173,11.1134706296729,15.7869723899283,8.68398338454061,42.8627401186523,20.4650724712124,31.778170406195,28.3474293244564,25.1118565668697,28.4760637651087,29.9934987516377,28.4895125872386,36.2560831444239,33.441168136965,32.0504085001549,36.0499292374624,36.7819011374358,35.8729665282149,22.6186925908908,13.5976420954677,17.2117495556663,25.6621174063401,34.8394780273509,28.834074901682,19.180388609071,53.5238365673271,23.9786246756355,22.2550084249084,26.2816545234015,14.8160654730582,24.0622568008986,22.9291989938954,17.0020494703456,19.2888866221466,24.1125544547379,60.0870861708779,34.7753208760258,20.4775444217344,28.830991805583,37.7781581607106,27.8764790513922,24.2780636154981,19.3487076457441,25.4616857670462,16.832207894204,26.1319875752338,29.202397128009,26.9014959813354,33.5107535681638,25.2829406348653,14.7586052004998,15.470331487228,44.2571487479924,30.2502637972601,17.3340636268891,26.792129378949,33.1626236911052,24.6148968290857,33.0743531410263,17.6589670486468,21.1204537257339,21.183207086382,28.0071065529802,21.1054403765094,35.845102726491,29.9755236892935,24.3519581766398,30.3660664528363,29.4395644996149,30.2243242277131,23.238439788508,20.0195261924326,25.9272338317596,24.8646363246192,24.0581840789004,24.936820879511,28.0464409489861,26.8706788461423,22.3883957563167,20.0480829783174,21.0363435731455,27.0414891278709,28.1893939544901,25.2996838177507,22.2729815021101,29.4004275118909,27.4409473008115,25.1285704304668,25.015689845316,32.3096442805201,41.7132774626301,27.6605610181361,25.1496905494788,22.1674354712214,22.086329814692,27.5398484549968,30.512882047896,23.8274024264429,24.3273679067649,47.1089035610712,56.1658512202838,36.6572899928687,19.8670710984361,22.1855667476027,26.3739270644924,30.7925916548068,29.6035218624085,34.9768758103109,31.7532483425341,38.266284530348,36.1220263544699,35.389990983031,35.2797528277904,33.1930853659137,42.4263154919095,37.4105132965099,11.9872414821995,10.945090506356,11.7519231454855,36.7060228661162,21.3958022014347,31.5020793739696,23.5805216986972,29.5927541380864,45.7448992519824,47.8738245967464,56.7166558305003,50.3529824267005,45.2154463048624,48.3452094329408,53.3267775183127,48.1843687449916,48.9393801702941,44.0096264989047,20.1347454313303,35.1141888592907,26.8051761033991,21.1502843849416,23.476674214334,24.8188736407519,28.4475811586067,29.256978127923,27.2781328153043,28.5547849293091,28.1362022878166,30.7460936459304,34.6473577638565,36.8784877852047,33.3700074632113,29.5302088595506,30.7093463753867,31.8300213765113,32.1427002626579,30.1757786275515,26.400932433677,29.2835080162907,32.4273218328356,31.1041331593183,30.0208923524905,27.7535913884699,28.5367637681525,28.6745985467249,28.2472556799393,17.9565526930476,28.591039367926,28.7633088536645,23.735400503842,33.1564840137967,25.2707660385295,29.2278376187397,29.9432458810123,30.5116896748584,29.4584031386019,29.118067323776,34.084571836202
|short_description=p1@Armc8
}}

Revision as of 20:19, 5 August 2015

Short description:p1@Armc8
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Armc8_5end
Coexpression cluster:MCL_coexpression_mm9:726
Association with transcript: 220bp_to_ENSMUST00000035043, NM_001166138, NM_028768, uc009ref.2, uc009reg.1, uc009reh.1_5end
EntrezGene:74125
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Armc8

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G728.67
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I67.28
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.93
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I711.58
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.88
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E934.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E729.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F221.77
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E641.09
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F151.37
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E431.33
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E837.50
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A111.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A319.44
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A511.89
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A238.33
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A439.21
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A629.71
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A340.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H216.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I915.41
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D110.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D212.85
GP2+ M cell, pool1.CNhs13228.11845-124H99.19
GP2+ M cell, pool2.CNhs13231.11846-124I16.46
GP2+ M cell, pool3.CNhs13240.11847-124I29.70
Ileum epithelium, pool1.CNhs13199.10252-104B913.11
Ileum epithelium, pool2.CNhs13232.10253-104C113.36
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C811.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F518.49
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F619.78
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F719.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G826.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H121.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H329.32
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G921.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H222.54
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H430.10
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D820.52
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D917.84
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B317.07
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.72
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.91
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.55
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.58
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A231.04
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I923.21
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A131.93
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C112.61
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E113.47
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C511.86
Mouse Granule cells, donor1.CNhs12131.11713-123C329.54
Mouse Granule cells, donor2.CNhs12357.11731-123E335.97
Mouse Granule cells, donor3.CNhs12108.11636-122C727.25
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.40
Mouse Meningeal cells, donor3.CNhs12109.11639-122D17.11
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.65
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E86.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D529.03
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F523.90
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D923.14
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F124.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D525.84
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D232.83
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F228.27
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D618.38
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D320.92
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F330.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D728.11
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D429.81
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F442.36
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D835.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E420.10
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E537.71
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I629.95
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D639.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F660.08
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E141.94
Mouse Schwann, donor1.CNhs12507.11728-123D922.57
Mouse Schwann, donor2.CNhs12573.11746-123F917.61
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G328.12
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F711.19
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F46.50
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.27
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A720.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I717.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E313.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I811.66
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G628.87
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H115.40
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G112.12
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G210.39
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.60
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.53
accessory axillary lymph node, adult.CNhs10475.1063-29H972.50
adrenal gland, adult.CNhs10508.49-24D734.74
adrenal gland, embryo E14.CNhs11038.406-44C518.74
adrenal gland, embryo E16.CNhs11004.1254-43D622.53
adrenal gland, embryo E17.CNhs11043.1263-45I120.29
adrenal gland, embryo E18.CNhs11026.1262-18F530.90
adrenal gland, neonate N00.CNhs11191.1311-23C132.81
adrenal gland, neonate N25.CNhs11223.1377-27I324.88
amnion, adult pregnant day17.5.CNhs10488.583-22A833.62
aorta, adult.CNhs10498.46-23H130.22
bone (os femoris), adult.CNhs10483.56-12G228.31
bone (os femoris), neonate N02.CNhs11227.1985-43F534.62
bone (os femoris), neonate N16.CNhs11225.1525-43A632.91
bone (os femoris), neonate N20.CNhs11195.1350-25C336.85
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B257.39
cerebellum, neonate N30.CNhs11135.1395-42I275.61
colon, adult.CNhs10468.36-18H720.69
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C721.33
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D113.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D419.44
corpora quadrigemina, adult.CNhs10501.16-22A437.90
corpus striatum, adult.CNhs10487.19-21D844.38
corpus striatum, neonate N00.CNhs11226.630-43F153.03
cortex, adult.CNhs10473.12-14D554.58
cortex, neonate N30.CNhs11107.1392-42F260.60
diencephalon, adult.CNhs10482.20-12F239.90
diencephalon, neonate N30.CNhs11201.1388-42B244.13
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B127.09
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A227.74
epididymis, adult.CNhs10490.58-23B226.28
eyeball, adult.CNhs10484.31-12G435.78
eyeball, embryo E12.CNhs11016.345-16C625.89
eyeball, embryo E14.CNhs10521.399-16E228.97
eyeball, embryo E15.CNhs10593.426-16C931.87
eyeball, embryo E17.CNhs11023.1261-18D444.61
eyeball, neonate N00.CNhs11207.633-15C648.24
eyeball, neonate N01.CNhs11140.1532-43E756.88
eyeball, neonate N02.CNhs11205.1551-44G846.66
eyeball, neonate N16.CNhs11188.777-19A246.05
forelimb, embryo E11.CNhs10596.335-25E218.97
forelimb, embryo E12.CNhs10600.359-14H224.39
forelimb, embryo E13.CNhs10589.384-1E224.99
forelimb, embryo E14.CNhs10577.413-26A820.17
forelimb, embryo E15.CNhs11007.437-20E729.19
forelimb, embryo E17.CNhs10598.1517-43C424.03
forelimb, embryo E18.CNhs11008.1520-43B532.51
gonad, embryo E13.CNhs11044.1564-45I628.26
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C818.26
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D217.24
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D519.61
heart, embryo E11.CNhs10586.331-24E925.06
heart, embryo E12.CNhs11015.353-12F526.74
heart, embryo E13.CNhs11013.376-3I925.93
heart, embryo E14.CNhs10597.403-26D431.72
heart, embryo E15.CNhs11017.431-16C835.02
heart, embryo E16.CNhs11021.457-17C633.63
heart, embryo E17.CNhs11025.479-18E537.21
heart, embryo E18.CNhs11030.1283-20G334.88
heart, neonate N00.CNhs11213.639-21E339.58
heart, neonate N03.CNhs11221.1349-25I234.72
heart, neonate N10.CNhs11118.749-24G147.44
heart, neonate N16.CNhs11209.782-15G142.80
heart, neonate N20.CNhs11127.821-26I647.08
heart, neonate N25.CNhs11196.1351-25D344.13
heart, neonate N30.CNhs11202.1390-42D238.92
hippocampus, adult.CNhs10478.13-16E858.25
hippocampus, neonate N00.CNhs11228.627-43G155.77
intestinal mucosa, adult.CNhs10506.860-29I322.14
intestine, adult.CNhs10496.178-9A316.66
intestine, embryo E12.CNhs11019.1251-16I522.82
intestine, embryo E13.CNhs11010.381-16D534.84
intestine, embryo E15.CNhs10602.976-16D830.80
intestine, embryo E16.CNhs10585.463-22H427.83
intestine, embryo E17.CNhs10582.482-18D324.02
intestine, embryo E18.CNhs10526.1289-20F722.45
intestine, neonate N00.CNhs11126.644-26D116.61
intestine, neonate N01.CNhs11192.1322-23E923.88
intestine, neonate N06.CNhs11102.688-20B825.64
intestine, neonate N07.CNhs11095.720-20F225.67
intestine, neonate N10.CNhs11098.755-23A526.52
intestine, neonate N20.CNhs11187.827-18D122.47
intestine, neonate N25.CNhs11121.1352-25E317.51
intestine, neonate N30.CNhs11131.1384-42G120.91
kidney, embryo E14.CNhs10606.411-4I914.98
kidney, embryo E15.CNhs10997.434-16F828.79
kidney, embryo E16.CNhs10584.464-22A532.69
kidney, embryo E17.CNhs11028.483-18I233.81
kidney, embryo E18.CNhs11001.1288-20C729.09
kidney, neonate N00.CNhs11214.646-21G728.26
kidney, neonate N10.CNhs11206.758-6D534.27
kidney, neonate N20.CNhs11113.832-19I133.21
kidney, neonate N25.CNhs11122.1353-25F328.89
kidney, neonate N30.CNhs11203.1385-42H126.16
liver, adult pregnant day01.CNhs10466.508-5B210.38
liver, embryo E12.CNhs10601.355-15F818.52
liver, embryo E13.CNhs10524.378-3H618.08
liver, embryo E14.CNhs10594.409-16E117.76
liver, embryo E15.CNhs10520.433-16D718.05
liver, embryo E16.CNhs10523.462-17F519.29
liver, embryo E17.CNhs10510.481-18A316.04
liver, embryo E18.CNhs10579.499-43G412.37
liver, neonate N00.CNhs11117.641-24F418.81
liver, neonate N03.CNhs11123.1345-25G215.10
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H221.21
liver, neonate N10.CNhs11115.751-24B919.66
liver, neonate N20.CNhs11220.823-25A311.11
liver, neonate N25.CNhs11198.1368-26H115.79
liver, neonate N30.CNhs11106.1382-42D18.68
lung, adult.CNhs10474.28-22B142.86
lung, embryo E12.CNhs10522.354-16G220.47
lung, embryo E14.CNhs10604.404-26F831.78
lung, embryo E15.CNhs11020.432-17C528.35
lung, embryo E16.CNhs10998.458-17B625.11
lung, embryo E17.CNhs10605.480-44A628.48
lung, embryo E18.CNhs10583.1287-20I629.99
lung, neonate N00.CNhs11224.640-42C628.49
lung, neonate N06.CNhs11212.683-20E536.26
lung, neonate N07.CNhs11111.715-19A333.44
lung, neonate N10.CNhs11219.750-23E632.05
lung, neonate N20.CNhs11109.822-18A436.05
lung, neonate N25.CNhs11119.1359-25C736.78
lung, neonate N30.CNhs11133.1394-42H235.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A122.62
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A113.60
mammary gland, adult lactating day02.CNhs10480.595-22B617.21
mammary gland, adult pregnant day19.CNhs10476.588-5H225.66
medulla oblongata, adult.CNhs10477.17-12C234.84
medulla oblongata, neonate N30.CNhs11200.1396-42A328.83
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C719.18
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C253.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E123.98
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E222.26
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E326.28
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D714.82
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D824.06
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D922.93
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D417.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D519.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D624.11
olfactory brain, adult.CNhs10489.18-22I960.09
ovary, adult.CNhs10507.91-2I734.78
ovary, embryo E18.CNhs11040.505-44H720.48
ovary, neonate N00.CNhs11217.1299-22I428.83
oviduct, adult pregnant day01.CNhs10500.988-6G637.78
pancreas, adult.CNhs10486.34-16E427.88
pancreas, embryo E14.CNhs11012.405-44F424.28
pancreas, embryo E15.CNhs11042.1556-45F219.35
pancreas, embryo E16.CNhs11003.460-26E525.46
pancreas, embryo E17.CNhs10599.1558-45G316.83
pancreas, embryo E18.CNhs10580.1535-43I726.13
pancreas, neonate N00.CNhs11105.645-26G929.20
pancreas, neonate N01.CNhs11138.1531-43D726.90
pancreas, neonate N02.CNhs11139.1539-43D833.51
pancreas, neonate N16.CNhs11136.787-43B625.28
pancreas, neonate N25.CNhs11094.1555-45E214.76
pancreas, neonate N30.CNhs11182.1548-44H515.47
pituitary gland, adult.CNhs10493.21-1G844.26
pituitary gland, embryo E12.CNhs11018.346-16E630.25
pituitary gland, embryo E13.CNhs11009.370-44C717.33
pituitary gland, embryo E14.CNhs11037.398-44A526.79
pituitary gland, embryo E15.CNhs10592.427-16B933.16
pituitary gland, embryo E16.CNhs11036.449-43F624.61
pituitary gland, embryo E17.CNhs11039.1265-44F533.07
pituitary gland, neonate N00.CNhs11190.1308-22E917.66
placenta, adult pregnant day10.CNhs10472.539-13I721.12
placenta, adult pregnant day17.CNhs10464.577-18G321.18
prostate, adult.CNhs10470.859-1F828.01
skin, adult.CNhs10492.30-1C321.11
skin, neonate N00.CNhs11124.650-25G435.85
skin, neonate N03.CNhs11215.662-22H329.98
skin, neonate N06.CNhs11097.693-20I524.35
skin, neonate N10.CNhs11108.762-6C430.37
small intestine, neonate N16.CNhs11114.790-21I129.44
spinal cord, adult.CNhs10505.24-13C930.22
spleen, adult.CNhs10465.25-2G223.24
spleen, embryo E16.CNhs11035.461-43C120.02
spleen, embryo E18.CNhs11011.1271-21F225.93
spleen, neonate N10.CNhs11116.752-24D124.86
spleen, neonate N20.CNhs11112.824-19H124.06
spleen, neonate N25.CNhs11099.1354-25G324.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C628.05
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C926.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D322.39
stomach, adult.CNhs10503.33-1H620.05
stomach, embryo E12.CNhs10588.356-43E321.04
stomach, embryo E15.CNhs10603.1252-16G827.04
stomach, embryo E16.CNhs11022.459-17D428.19
stomach, embryo E17.CNhs11006.1035-18D525.30
stomach, embryo E18.CNhs10999.1286-20C622.27
stomach, neonate N03.CNhs11193.1340-24B829.40
stomach, neonate N07.CNhs11210.718-18A927.44
stomach, neonate N25.CNhs11104.1355-25E425.13
stomach, neonate N30.CNhs11134.1386-42I125.02
submandibular gland, adult.CNhs10469.59-29C132.31
testis, adult.CNhs10504.57-7G541.71
testis, embryo E13.CNhs11031.389-23F527.66
testis, embryo E15.CNhs11034.443-27C525.15
testis, embryo E16.CNhs11033.470-26G522.17
testis, embryo E17.CNhs11029.486-18I522.09
testis, embryo E18.CNhs11027.503-18G527.54
testis, neonate N00.CNhs11189.1300-22B730.51
testis, neonate N07.CNhs11222.726-26I423.83
testis, neonate N10.CNhs11204.763-44D924.33
testis, neonate N20.CNhs11110.839-18H347.11
testis, neonate N30.CNhs11130.1391-42E256.17
thymus, adult.CNhs10471.38-12B536.66
thymus, embryo E14.CNhs11041.402-44I419.87
thymus, embryo E15.CNhs11005.430-45I222.19
thymus, embryo E16.CNhs11002.456-26C526.37
thymus, embryo E17.CNhs10581.478-18C130.79
thymus, embryo E18.CNhs10595.1273-19G429.60
thymus, neonate N02.CNhs11181.1541-43F834.98
thymus, neonate N03.CNhs11137.2104-43C731.75
thymus, neonate N06.CNhs11197.681-26C438.27
thymus, neonate N07.CNhs11211.713-19D336.12
thymus, neonate N10.CNhs11194.748-24E435.39
thymus, neonate N20.CNhs11186.820-7A235.28
thymus, neonate N25.CNhs11125.1362-25G733.19
thymus, neonate N30.CNhs11132.1393-42G242.43
tongue, adult.CNhs10499.32-1B437.41
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H311.99
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F710.95
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G511.75
urinary bladder, adult.CNhs10481.879-12E436.71
uterus, adult pregnant day19.CNhs10497.590-15F521.40
uterus, adult.CNhs10509.92-27E531.50
vagina, adult.CNhs10502.89-27D523.58
vesicular gland, adult.CNhs10491.51-27F829.59
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A145.74
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A247.87
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A356.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D750.35
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A445.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A548.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A653.33
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A748.18
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A848.94
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A944.01
whole body, embryo E11.CNhs11014.324-5I820.13
whole body, embryo E12.CNhs10587.857-27C935.11
whole body, embryo E13.CNhs10512.372-23H226.81
whole body, embryo E14.5.CNhs10578.420-27D221.15
whole body, embryo E14.CNhs10519.395-14B123.48
whole body, embryo E16.CNhs10514.453-14F224.82
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G528.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G529.26
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G527.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G528.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G528.14
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G530.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G534.65
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G536.88
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G533.37
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G529.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G530.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G531.83
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G532.14
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G530.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G526.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G529.28
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G532.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G531.10
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G530.02
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G527.75
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G528.54
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G528.67
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G528.25
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G517.96
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G528.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G528.76
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G523.74
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G533.16
whole body, embryo E17.5.CNhs10513.490-9F925.27
whole body, embryo E17.CNhs10517.475-3I529.23
whole body, embryo E18.CNhs10516.493-3B329.94
whole body, neonate N00.CNhs10525.657-19C230.51
whole body, neonate N01.CNhs10576.659-23C629.46
whole body, neonate N06.CNhs10515.692-21D129.12
whole body, neonate N10.CNhs10518.761-6B434.08





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest4.37e-1292
neurectoderm4.65e-1064
neural plate4.65e-1064
presumptive neural plate4.65e-1064
pre-chordal neural plate7.64e-1049
ecto-epithelium1.66e-0973
neural tube4.46e-0852
neural rod4.46e-0852
future spinal cord4.46e-0852
neural keel4.46e-0852
regional part of nervous system1.06e-0754
brain1.42e-0747
future brain1.42e-0747
gray matter2.25e-0734
anterior neural tube3.62e-0740
occipital lobe3.70e-0710
visual cortex3.70e-0710
neocortex3.70e-0710
regional part of brain4.44e-0746
regional part of forebrain8.15e-0739
forebrain8.15e-0739
future forebrain8.15e-0739
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