FFCP PHASE1:Mm9::chr8:112519984..112520017,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=534 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:112519984..112520017,+ | |||
|description=CAGE_peak_at_chr8:112519984..112520017,+ | |description=CAGE_peak_at_chr8:112519984..112520017,+ | ||
|id=chr8:112519984..112520017,+ | |id=chr8:112519984..112520017,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.02e-18!5;CL:0000417!1.02e-18!5;CL:0000668!1.02e-18!5;CL:0000412!1.02e-18!5;CL:0000182!1.02e-18!5;CL:0000414!1.27e-08!11;CL:0000057!6.09e-07!1;CL:0000632!6.09e-07!1 | |ontology_enrichment_celltype=CL:0000181!1.02e-18!5;CL:0000417!1.02e-18!5;CL:0000668!1.02e-18!5;CL:0000412!1.02e-18!5;CL:0000182!1.02e-18!5;CL:0000414!1.27e-08!11;CL:0000057!6.09e-07!1;CL:0000632!6.09e-07!1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.30e-26,5;CL:0000057,3.04e-09,1;CL:0000632,3.04e-09,1;CL:0000223,8.68e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!9.16e-30!22;UBERON:0007499!9.16e-30!22;UBERON:0006925!9.16e-30!22;UBERON:0009497!9.16e-30!22;UBERON:0000015!9.16e-30!22;UBERON:0002423!9.16e-30!22;UBERON:0006235!9.16e-30!22;UBERON:0008835!9.16e-30!22;UBERON:0003894!9.16e-30!22;UBERON:0004161!9.16e-30!22;UBERON:0008836!9.16e-30!22;UBERON:0009854!2.05e-28!23;UBERON:0009856!2.05e-28!23;UBERON:0002365!4.90e-26!25;UBERON:0002330!4.90e-26!25;UBERON:0005256!1.05e-15!47;UBERON:0005172!5.31e-15!49;UBERON:0005173!5.31e-15!49;UBERON:0002417!5.31e-15!49;UBERON:0000916!5.31e-15!49;UBERON:0003914!3.39e-13!47;UBERON:0005057!4.79e-12!51;UBERON:0002368!5.86e-12!60;UBERON:0000949!1.81e-11!72;UBERON:0003929!4.62e-11!55;UBERON:0002530!6.51e-11!65;UBERON:0009569!1.01e-10!66;UBERON:0005177!1.92e-09!85;UBERON:0000490!5.75e-09!66;UBERON:0000466!1.08e-08!79;UBERON:0005911!1.64e-08!69;UBERON:0002405!2.29e-08!70;UBERON:0002100!6.00e-08!98;UBERON:0001041!3.19e-07!92;UBERON:0000077!9.24e-07!97 | |ontology_enrichment_uberon=UBERON:0002107!9.16e-30!22;UBERON:0007499!9.16e-30!22;UBERON:0006925!9.16e-30!22;UBERON:0009497!9.16e-30!22;UBERON:0000015!9.16e-30!22;UBERON:0002423!9.16e-30!22;UBERON:0006235!9.16e-30!22;UBERON:0008835!9.16e-30!22;UBERON:0003894!9.16e-30!22;UBERON:0004161!9.16e-30!22;UBERON:0008836!9.16e-30!22;UBERON:0009854!2.05e-28!23;UBERON:0009856!2.05e-28!23;UBERON:0002365!4.90e-26!25;UBERON:0002330!4.90e-26!25;UBERON:0005256!1.05e-15!47;UBERON:0005172!5.31e-15!49;UBERON:0005173!5.31e-15!49;UBERON:0002417!5.31e-15!49;UBERON:0000916!5.31e-15!49;UBERON:0003914!3.39e-13!47;UBERON:0005057!4.79e-12!51;UBERON:0002368!5.86e-12!60;UBERON:0000949!1.81e-11!72;UBERON:0003929!4.62e-11!55;UBERON:0002530!6.51e-11!65;UBERON:0009569!1.01e-10!66;UBERON:0005177!1.92e-09!85;UBERON:0000490!5.75e-09!66;UBERON:0000466!1.08e-08!79;UBERON:0005911!1.64e-08!69;UBERON:0002405!2.29e-08!70;UBERON:0002100!6.00e-08!98;UBERON:0001041!3.19e-07!92;UBERON:0000077!9.24e-07!97 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.15e-35,22;UBERON:0007499,1.15e-35,22;UBERON:0006925,1.15e-35,22;UBERON:0009497,1.15e-35,22;UBERON:0000015,1.15e-35,22;UBERON:0002423,1.15e-35,22;UBERON:0006235,1.15e-35,22;UBERON:0008835,1.15e-35,22;UBERON:0003894,1.15e-35,22;UBERON:0004161,1.15e-35,22;UBERON:0008836,1.15e-35,22;UBERON:0009854,4.27e-34,23;UBERON:0009856,4.27e-34,23;UBERON:0002365,2.48e-31,25;UBERON:0002330,2.48e-31,25;UBERON:0005256,3.66e-17,45;UBERON:0003914,2.09e-16,47;UBERON:0005172,1.04e-15,49;UBERON:0005173,1.04e-15,49;UBERON:0002417,1.04e-15,49;UBERON:0000916,1.04e-15,49;UBERON:0003929,6.34e-14,55;UBERON:0002368,1.05e-12,60;UBERON:0003104,1.73e-12,61;UBERON:0009142,1.73e-12,61;UBERON:0002530,1.13e-11,65;UBERON:0000490,1.74e-11,66;UBERON:0009569,1.74e-11,66;UBERON:0005911,5.90e-11,69;UBERON:0000949,1.81e-10,72;UBERON:0005177,1.80e-09,79;UBERON:0001041,2.41e-09,80;UBERON:0002100,3.24e-08,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,2.03991400112325,2.69851595818909,6.49776417447669,4.03224198387602,0.421333260395256,0,0,0,0,0,0,0,0,0,0,2.39786147410026,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889357881261447,0,0,0,0,0,0,0,5.67473293712624,0,2.87536413054709,0,0,1.01031551178845,1.25578189465339,3.37710464954357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,2.03991400112325,2.69851595818909,6.49776417447669,4.03224198387602,0.421333260395256,0,0,0,0,0,0,0,0,0,0,2.39786147410026,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889357881261447,0,0,0,0,0,0,0,5.67473293712624,0,2.87536413054709,0,0,1.01031551178845,1.25578189465339,3.37710464954357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:112519984..112520017,+ | |short_description=p@chr8:112519984..112520017,+ | ||
}} | }} |
Latest revision as of 21:53, 5 August 2015
Short description: | p@chr8:112519984..112520017, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:112519984..112520017, + |
Coexpression cluster: | MCL_coexpression_mm9:534 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.30e-26 | 5 |
fibroblast | 3.04e-09 | 1 |
hepatic stellate cell | 3.04e-09 | 1 |
endodermal cell | 8.68e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
liver | 1.15e-35 | 22 |
epithelial sac | 1.15e-35 | 22 |
digestive gland | 1.15e-35 | 22 |
epithelium of foregut-midgut junction | 1.15e-35 | 22 |
anatomical boundary | 1.15e-35 | 22 |
hepatobiliary system | 1.15e-35 | 22 |
foregut-midgut junction | 1.15e-35 | 22 |
hepatic diverticulum | 1.15e-35 | 22 |
liver primordium | 1.15e-35 | 22 |
septum transversum | 1.15e-35 | 22 |
liver bud | 1.15e-35 | 22 |
digestive tract diverticulum | 4.27e-34 | 23 |
sac | 4.27e-34 | 23 |
exocrine gland | 2.48e-31 | 25 |
exocrine system | 2.48e-31 | 25 |
trunk mesenchyme | 3.66e-17 | 45 |
epithelial tube | 2.09e-16 | 47 |
abdomen element | 1.04e-15 | 49 |
abdominal segment element | 1.04e-15 | 49 |
abdominal segment of trunk | 1.04e-15 | 49 |
abdomen | 1.04e-15 | 49 |
gut epithelium | 6.34e-14 | 55 |
endocrine gland | 1.05e-12 | 60 |
mesenchyme | 1.73e-12 | 61 |
entire embryonic mesenchyme | 1.73e-12 | 61 |
gland | 1.13e-11 | 65 |
unilaminar epithelium | 1.74e-11 | 66 |
subdivision of trunk | 1.74e-11 | 66 |
endo-epithelium | 5.90e-11 | 69 |
endocrine system | 1.81e-10 | 72 |
trunk region element | 1.80e-09 | 79 |
foregut | 2.41e-09 | 80 |
trunk | 3.24e-08 | 90 |