FFCP PHASE1:Mm9::chr1:72873148..72873157,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=176 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:72873148..72873157,+ | |||
|description=CAGE_peak_at_chr1:72873148..72873157,+ | |description=CAGE_peak_at_chr1:72873148..72873157,+ | ||
|id=chr1:72873148..72873157,+ | |id=chr1:72873148..72873157,+ | ||
|ontology_enrichment_celltype=CL:0002453!1.41e-10!8;CL:0002319!2.51e-10!43;CL:0000221!5.27e-10!44;CL:0000133!5.27e-10!44;CL:0000055!2.40e-08!50;CL:0000333!2.74e-08!10;CL:0000095!2.74e-08!10;CL:0000243!2.74e-08!10;CL:0000123!2.74e-08!10;CL:0000125!2.74e-08!10;CL:0000030!2.74e-08!10;CL:0000339!2.74e-08!10;CL:0000117!4.06e-08!23;CL:0000337!4.06e-08!23 | |ontology_enrichment_celltype=CL:0002453!1.41e-10!8;CL:0002319!2.51e-10!43;CL:0000221!5.27e-10!44;CL:0000133!5.27e-10!44;CL:0000055!2.40e-08!50;CL:0000333!2.74e-08!10;CL:0000095!2.74e-08!10;CL:0000243!2.74e-08!10;CL:0000123!2.74e-08!10;CL:0000125!2.74e-08!10;CL:0000030!2.74e-08!10;CL:0000339!2.74e-08!10;CL:0000117!4.06e-08!23;CL:0000337!4.06e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002605,6.35e-36,2;CL:0002604,6.35e-36,2;CL:0002453,1.94e-35,8;CL:0000333,1.56e-28,10;CL:0000095,1.56e-28,10;CL:0000243,1.56e-28,10;CL:0000123,1.56e-28,10;CL:0000125,1.56e-28,10;CL:0000030,1.56e-28,10;CL:0000339,1.56e-28,10;CL:0000128,6.93e-27,6;CL:0000126,6.93e-27,6;CL:0000127,6.93e-27,6;CL:0002319,9.33e-11,43;CL:0000221,1.59e-10,44;CL:0000133,1.59e-10,44;CL:0000878,4.13e-10,2;CL:0000129,4.13e-10,2;CL:0002603,6.19e-10,2;CL:0000120,5.46e-07,3;CL:0002321,8.13e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.15e-12!71;UBERON:0003075!2.15e-12!71;UBERON:0007284!2.15e-12!71;UBERON:0003056!5.61e-12!49;UBERON:0004121!6.17e-12!102;UBERON:0000924!6.17e-12!102;UBERON:0006601!6.17e-12!102;UBERON:0000033!1.18e-10!63;UBERON:0001017!4.75e-10!73;UBERON:0005743!4.75e-10!73;UBERON:0000073!1.22e-09!75;UBERON:0001016!1.22e-09!75;UBERON:0001049!1.03e-08!52;UBERON:0005068!1.03e-08!52;UBERON:0006241!1.03e-08!52;UBERON:0007135!1.03e-08!52;UBERON:0000970!8.17e-08!9;UBERON:0000019!8.17e-08!9;UBERON:0000047!8.17e-08!9;UBERON:0004088!8.17e-08!9;UBERON:0002104!8.17e-08!9;UBERON:0001456!8.17e-08!9;UBERON:0003072!8.17e-08!9;UBERON:0003071!8.17e-08!9;UBERON:0004128!8.17e-08!9;UBERON:0002020!2.63e-07!34;UBERON:0002616!4.20e-07!49;UBERON:0000955!6.80e-07!50;UBERON:0006238!6.80e-07!50;UBERON:0003080!7.03e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,4.44e-11,7;UBERON:0003022,4.44e-11,7;UBERON:0002421,4.44e-11,7;UBERON:0000349,4.44e-11,7;UBERON:0002600,4.44e-11,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96222640742402,2.41654801007919,5.05517737593137,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0.299600110518405,4.61061966385865,0.414758449233911,0.135005938331691,0.210324961351382,0,0,0.244981598429908,0,0,0,0,0,0,0.274462930807229,0,0,0.56276261003168,0,0.294628585473668,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0,0,0,0,0,0.101839363850316,0,0,0,0.260240885925407,0.229902104433473,0.360124259610698,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0,0,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0.415149390336707,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96222640742402,2.41654801007919,5.05517737593137,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0.299600110518405,4.61061966385865,0.414758449233911,0.135005938331691,0.210324961351382,0,0,0.244981598429908,0,0,0,0,0,0,0.274462930807229,0,0,0.56276261003168,0,0.294628585473668,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0,0,0,0,0,0.101839363850316,0,0,0,0.260240885925407,0.229902104433473,0.360124259610698,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0,0,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0.415149390336707,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:72873148..72873157,+ | |short_description=p@chr1:72873148..72873157,+ | ||
}} | }} |
Latest revision as of 23:13, 5 August 2015
Short description: | p@chr1:72873148..72873157, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:72873148..72873157, + |
Coexpression cluster: | MCL_coexpression_mm9:176 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 6.35e-36 | 2 |
astrocyte of the hippocampus | 6.35e-36 | 2 |
oligodendrocyte precursor cell | 1.94e-35 | 8 |
migratory neural crest cell | 1.56e-28 | 10 |
neuron associated cell | 1.56e-28 | 10 |
glial cell (sensu Vertebrata) | 1.56e-28 | 10 |
neuron associated cell (sensu Vertebrata) | 1.56e-28 | 10 |
glial cell | 1.56e-28 | 10 |
glioblast | 1.56e-28 | 10 |
glioblast (sensu Vertebrata) | 1.56e-28 | 10 |
oligodendrocyte | 6.93e-27 | 6 |
macroglial cell | 6.93e-27 | 6 |
astrocyte | 6.93e-27 | 6 |
neural cell | 9.33e-11 | 43 |
ectodermal cell | 1.59e-10 | 44 |
neurectodermal cell | 1.59e-10 | 44 |
central nervous system macrophage | 4.13e-10 | 2 |
microglial cell | 4.13e-10 | 2 |
astrocyte of the cerebellum | 6.19e-10 | 2 |
granule cell | 5.46e-07 | 3 |
embryonic cell | 8.13e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 4.44e-11 | 7 |
lobe parts of cerebral cortex | 4.44e-11 | 7 |
hippocampal formation | 4.44e-11 | 7 |
limbic system | 4.44e-11 | 7 |
limbic lobe | 4.44e-11 | 7 |