FFCP PHASE1:Mm9::chr16:11406870..11406882,+: Difference between revisions
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{{FFCP|EntrezGene=74478|HGNC=|MCL_coexpression_id=11|UniProt=E9Q6P3|association_with_transcript=120bp_to_ENSMUST00000122168_5end|description=CAGE_peak_7_at_Snx29_5end|id=chr16:11406870..11406882,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000057,1.86e-15,1;CL:0000632,1.86e-15,1;CL:0000182,1.62e-12,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!6.65e-22!14;UBERON:0003918!6.65e-22!14;UBERON:0005095!6.65e-22!14;UBERON:0007687!6.65e-22!14;UBERON:0006554!4.68e-19!16;UBERON:0001008!6.99e-18!17;UBERON:0000489!2.66e-14!21;UBERON:0005172!4.91e-13!49;UBERON:0005173!4.91e-13!49;UBERON:0002417!4.91e-13!49;UBERON:0000916!4.91e-13!49;UBERON:0009569!3.30e-09!66;UBERON:0005177!9.87e-07!85|ontology_enrichment_uberon_v019_2=UBERON:0005172,4.27e-11,49;UBERON:0005173,4.27e-11,49;UBERON:0002417,4.27e-11,49;UBERON:0000916,4.27e-11,49;UBERON:0002113,3.07e-10,14;UBERON:0003918,3.07e-10,14;UBERON:0011143,3.07e-10,14;UBERON:0005095,3.07e-10,14;UBERON:0007687,3.07e-10,14;UBERON:0003104,5.52e-09,61;UBERON:0009142,5.52e-09,61;UBERON:0009569,2.50e-08,66;UBERON:0006554,4.05e-08,18;UBERON:0001008,9.99e-08,19;UBERON:0000489,4.72e-07,21;UBERON:0005177,5.28e-07,79|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,0,2.69851595818909,0,1.79210754838934,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.350679099451593,0.379419222745544,4.28069429140846,3.767969468193,5.18268088471562,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299033092087958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p7@Snx29}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:74478 | |||
|HGNC= | |||
|MCL_coexpression_id=11 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q6P3 | |||
|association_with_transcript=120bp_to_ENSMUST00000122168_5end | |||
|cluster_id=chr16:11406870..11406882,+ | |||
|description=CAGE_peak_7_at_Snx29_5end | |||
|id=chr16:11406870..11406882,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.86e-15,1;CL:0000632,1.86e-15,1;CL:0000182,1.62e-12,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!6.65e-22!14;UBERON:0003918!6.65e-22!14;UBERON:0005095!6.65e-22!14;UBERON:0007687!6.65e-22!14;UBERON:0006554!4.68e-19!16;UBERON:0001008!6.99e-18!17;UBERON:0000489!2.66e-14!21;UBERON:0005172!4.91e-13!49;UBERON:0005173!4.91e-13!49;UBERON:0002417!4.91e-13!49;UBERON:0000916!4.91e-13!49;UBERON:0009569!3.30e-09!66;UBERON:0005177!9.87e-07!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,4.27e-11,49;UBERON:0005173,4.27e-11,49;UBERON:0002417,4.27e-11,49;UBERON:0000916,4.27e-11,49;UBERON:0002113,3.07e-10,14;UBERON:0003918,3.07e-10,14;UBERON:0011143,3.07e-10,14;UBERON:0005095,3.07e-10,14;UBERON:0007687,3.07e-10,14;UBERON:0003104,5.52e-09,61;UBERON:0009142,5.52e-09,61;UBERON:0009569,2.50e-08,66;UBERON:0006554,4.05e-08,18;UBERON:0001008,9.99e-08,19;UBERON:0000489,4.72e-07,21;UBERON:0005177,5.28e-07,79 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,0,2.69851595818909,0,1.79210754838934,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.350679099451593,0.379419222745544,4.28069429140846,3.767969468193,5.18268088471562,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299033092087958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@Snx29 | |||
}} |
Revision as of 01:13, 6 August 2015
Short description: | p7@Snx29 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Snx29_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | 120bp_to_ENSMUST00000122168_5end |
EntrezGene: | 74478 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.86e-15 | 1 |
hepatic stellate cell | 1.86e-15 | 1 |
hepatocyte | 1.62e-12 | 5 |
Ontology term | p-value | n |
---|---|---|
abdomen element | 4.27e-11 | 49 |
abdominal segment element | 4.27e-11 | 49 |
abdominal segment of trunk | 4.27e-11 | 49 |
abdomen | 4.27e-11 | 49 |
kidney | 3.07e-10 | 14 |
kidney mesenchyme | 3.07e-10 | 14 |
upper urinary tract | 3.07e-10 | 14 |
kidney rudiment | 3.07e-10 | 14 |
kidney field | 3.07e-10 | 14 |
mesenchyme | 5.52e-09 | 61 |
entire embryonic mesenchyme | 5.52e-09 | 61 |
subdivision of trunk | 2.50e-08 | 66 |
urinary system structure | 4.05e-08 | 18 |
renal system | 9.99e-08 | 19 |
cavitated compound organ | 4.72e-07 | 21 |
trunk region element | 5.28e-07 | 79 |