FFCP PHASE1:Mm9::chr6:67741017..67741021,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:67741017..67741021,+
|short_description=p1@ENSMUST00000103307
|description=CAGE_peak_1_at_ENSMUST00000103307_5end
|association_with_transcript=-18bp_to_ENS...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=63 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_ENSMUST00000103307_5end | |||
|cluster_id=chr6:67741017..67741021,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000103307_5end | |||
|id=chr6:67741017..67741021,+ | |||
|ontology_enrichment_celltype=CL:0000553!2.91e-15!6;CL:0000556!2.91e-15!6;CL:0000050!4.24e-10!9;CL:0000414!3.25e-08!11;CL:0000839!6.59e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.19e-11,6;CL:0000556,2.19e-11,6;CL:0000945,2.89e-08,1;CL:0000236,2.89e-08,1;CL:0000826,2.89e-08,1;CL:0000050,8.84e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.05e-14!48;UBERON:0002465!1.36e-12!3;UBERON:0002106!1.12e-09!6;UBERON:0004457!1.12e-09!6;UBERON:0000042!1.12e-09!6;UBERON:0004854!1.12e-09!6;UBERON:0009034!1.12e-09!6;UBERON:0002095!1.12e-09!6;UBERON:0004782!1.12e-09!6;UBERON:0003281!1.12e-09!6;UBERON:0009664!1.12e-09!6;UBERON:0002296!1.12e-09!6;UBERON:0005602!1.12e-09!6;UBERON:0001179!1.12e-09!6;UBERON:0006293!1.12e-09!6;UBERON:0002390!3.23e-09!45;UBERON:0003061!3.23e-09!45;UBERON:0001962!6.99e-09!2;UBERON:0001961!6.99e-09!2;UBERON:0001744!6.99e-09!2;UBERON:0002405!7.27e-09!70;UBERON:0001155!1.27e-08!2;UBERON:0000059!1.27e-08!2;UBERON:0003887!1.43e-08!10;UBERON:0007023!5.48e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.69e-23,3;UBERON:0001962,4.09e-16,2;UBERON:0001961,4.09e-16,2;UBERON:0001744,4.09e-16,2;UBERON:0001155,1.35e-15,2;UBERON:0000059,1.35e-15,2;UBERON:0000029,4.39e-09,1;UBERON:0001097,4.39e-09,1;UBERON:0003968,4.39e-09,1;UBERON:0001467,4.39e-09,1;UBERON:0003199,7.41e-09,1;UBERON:0001153,8.81e-09,1;UBERON:0001045,8.81e-09,1;UBERON:0007023,8.95e-09,51;UBERON:0001044,1.47e-08,1;UBERON:0001736,1.47e-08,1;UBERON:0003293,1.47e-08,1;UBERON:0003294,1.47e-08,1;UBERON:0001829,1.47e-08,1;UBERON:0010047,1.47e-08,1;UBERON:0000167,1.47e-08,1;UBERON:0006298,1.47e-08,1;UBERON:0002193,4.16e-07,48;UBERON:0002405,4.16e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,1.82227740650843,0,3.15462165358238,1.7824876368746,0.84877930359606,0,0,0,6.07971206614945,5.96464130774642,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34226084846189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,26.4116641320115,0,0,0,0,0,0,0,0,0,7.96149496754887,0,0,0,3.72783522436244,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07567585436135,0,0,0.188368457004691,0.683471138605126,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,1.82227740650843,0,3.15462165358238,1.7824876368746,0.84877930359606,0,0,0,6.07971206614945,5.96464130774642,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34226084846189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,26.4116641320115,0,0,0,0,0,0,0,0,0,7.96149496754887,0,0,0,3.72783522436244,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07567585436135,0,0,0.188368457004691,0.683471138605126,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENSMUST00000103307 | |||
}} | }} |
Latest revision as of 01:14, 6 August 2015
Short description: | p1@ENSMUST00000103307 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000103307_5end |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | -18bp_to_ENSMUST00000103307_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.19e-11 | 6 |
megakaryocyte | 2.19e-11 | 6 |
lymphocyte of B lineage | 2.89e-08 | 1 |
B cell | 2.89e-08 | 1 |
pro-B cell | 2.89e-08 | 1 |
megakaryocyte-erythroid progenitor cell | 8.84e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 1.69e-23 | 3 |
gut-associated lymphoid tissue | 4.09e-16 | 2 |
mucosa-associated lymphoid tissue | 4.09e-16 | 2 |
lymphoid tissue | 4.09e-16 | 2 |
colon | 1.35e-15 | 2 |
large intestine | 1.35e-15 | 2 |
lymph node | 4.39e-09 | 1 |
axillary lymph node | 4.39e-09 | 1 |
peripheral lymph node | 4.39e-09 | 1 |
shoulder | 4.39e-09 | 1 |
egg chamber | 7.41e-09 | 1 |
caecum | 8.81e-09 | 1 |
midgut | 8.81e-09 | 1 |
adult organism | 8.95e-09 | 51 |
saliva-secreting gland | 1.47e-08 | 1 |
submandibular gland | 1.47e-08 | 1 |
gland of oral region | 1.47e-08 | 1 |
gland of foregut | 1.47e-08 | 1 |
major salivary gland | 1.47e-08 | 1 |
oral gland | 1.47e-08 | 1 |
oral cavity | 1.47e-08 | 1 |
submandibular gland primordium | 1.47e-08 | 1 |
hemolymphoid system | 4.16e-07 | 48 |
immune system | 4.16e-07 | 48 |