FFCP PHASE1:Mm9::chr1:78306130..78306143,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=412 | |MCL_coexpression_id=412 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:78306130..78306143,+ | |||
|description=CAGE_peak_at_chr1:78306130..78306143,+ | |description=CAGE_peak_at_chr1:78306130..78306143,+ | ||
|id=chr1:78306130..78306143,+ | |id=chr1:78306130..78306143,+ | ||
|ontology_enrichment_celltype=CL:0002563!3.78e-08!9;CL:0002251!3.78e-08!9 | |ontology_enrichment_celltype=CL:0002563!3.78e-08!9;CL:0002251!3.78e-08!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.65e-14,9;CL:0002251,2.65e-14,9;CL:0000239,9.95e-09,6;CL:0000677,9.95e-09,6;CL:0000584,9.95e-09,6;CL:0000066,4.60e-08,25;CL:0002076,5.40e-08,15;CL:0000075,2.02e-07,7;CL:0002250,2.59e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.29e-14!43;UBERON:0005409!1.11e-13!59;UBERON:0000344!7.00e-13!15;UBERON:0001242!2.51e-11!13;UBERON:0000060!2.51e-11!13;UBERON:0001262!2.51e-11!13;UBERON:0004786!2.51e-11!13;UBERON:0004923!8.90e-09!24;UBERON:0003350!3.78e-08!9;UBERON:0004808!3.78e-08!9;UBERON:0001277!3.78e-08!9 | |ontology_enrichment_uberon=UBERON:0000160!4.29e-14!43;UBERON:0005409!1.11e-13!59;UBERON:0000344!7.00e-13!15;UBERON:0001242!2.51e-11!13;UBERON:0000060!2.51e-11!13;UBERON:0001262!2.51e-11!13;UBERON:0004786!2.51e-11!13;UBERON:0004923!8.90e-09!24;UBERON:0003350!3.78e-08!9;UBERON:0004808!3.78e-08!9;UBERON:0001277!3.78e-08!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.50e-50,31;UBERON:0005409,1.89e-38,47;UBERON:0000344,1.11e-25,15;UBERON:0001242,6.39e-22,13;UBERON:0001262,6.39e-22,13;UBERON:0004786,6.39e-22,13;UBERON:0004923,3.25e-19,24;UBERON:0004119,6.01e-15,118;UBERON:0000925,6.01e-15,118;UBERON:0006595,6.01e-15,118;UBERON:0003350,2.65e-14,9;UBERON:0004808,2.65e-14,9;UBERON:0001277,2.65e-14,9;UBERON:0001007,3.31e-13,116;UBERON:0001555,3.31e-13,116;UBERON:0007026,3.31e-13,116;UBERON:0000485,1.97e-11,11;UBERON:0004921,2.18e-11,114;UBERON:0002108,4.44e-09,4;UBERON:0000331,5.33e-07,3;UBERON:0002116,5.33e-07,3;UBERON:0001204,5.33e-07,3;UBERON:0001168,5.33e-07,3 | |||
|phase1_expression=0,1.74487703819681,0.909998478779072,2.41971369045464,3.00537437967808,2.01455126294268,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,2.55987876469451,2.75291137280604,2.29692785646008,1.7230479846363,1.939241094173,3.23039813075836,1.51218077855958,2.88249663851896,0,0,0,3.75507105676657,1.82858109894342,3.87921776898501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.307213066512487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0.29688427812965,0,0,0,0.150722640552623,0,0,0.247194967734374,0,0,0,0,0,1.86391761218122,1.17112318804619,0.209446706813455,4.08731288333746,0,0,0,0.898743836428936,0.457500602818626,0,0.347648640384553,0.511430914660661,0.83115217823824,0.162241263067758,0,0,0,0,0.260240885925407,0,0,0.150704817835715,0,0.512454881139399,0,0.258703370739016,0,0.378212160335639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28670052774077,4.49565963328025,0,0.232236671860439,1.9330119198314,1.61346819698674,3.7804267453628,2.47293313946327,4.74529061544512,1.15289268306808,1.00534083520108,1.98956472041151,2.9244613067868,5.39291645192533,4.10662294761919,3.38540164532424,0.189667900953082,0.114248512609729,1.1270773567308,0.203651327845314,0.193952487167626,0.0701358198903186,0.316182685621286,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.335012514883631,0,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0,0.642202359951168,0.820481806145422,0,0,0.315508219416257,0,0.646270193198397,0.238968797952552,0,0.283076530788832,0.404810701674894,0,1.58115111178609,0.963963949265421,0,0,0,0.164970122972535,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0.340439605753788,0,0,0,0.354680467284547,0,0.164549020602121,0,1.40803024838226,1.27099242518292,0,0,0.161464426695906,0,0.716234064018819,0.328281799490123,4.08073171281791,0.741701208042039,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0.648032044930808,0.209088296014469,1.74690050996942,0.674321731924103,0.495920734352016,0.26175594198403,4.53652406521275,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.375364950902364,0.183151624267265,0,0,0,0,0,0.515559547031063,0.685082519770642,0,0,0.45032120322422,0,0.51776031175182,0.207574695168353,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0.412070114477788,0,0.505394423527595,0.25347929989024,0.377252682772152,0.0936415074698824,0.448176066834085,0.34461281373368,0.952587382566147,0.115884325944855,0.192909220463705,0.412085900803307,0.441596760403192,1.37147700954166,0.532427418478012,0.476872379894642,0.290692833264657,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0,1.12228454331548,0.118635018124174,0.0985044823755635,0,0.619747364743864,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0,1.74487703819681,0.909998478779072,2.41971369045464,3.00537437967808,2.01455126294268,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,2.55987876469451,2.75291137280604,2.29692785646008,1.7230479846363,1.939241094173,3.23039813075836,1.51218077855958,2.88249663851896,0,0,0,3.75507105676657,1.82858109894342,3.87921776898501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.307213066512487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0.29688427812965,0,0,0,0.150722640552623,0,0,0.247194967734374,0,0,0,0,0,1.86391761218122,1.17112318804619,0.209446706813455,4.08731288333746,0,0,0,0.898743836428936,0.457500602818626,0,0.347648640384553,0.511430914660661,0.83115217823824,0.162241263067758,0,0,0,0,0.260240885925407,0,0,0.150704817835715,0,0.512454881139399,0,0.258703370739016,0,0.378212160335639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28670052774077,4.49565963328025,0,0.232236671860439,1.9330119198314,1.61346819698674,3.7804267453628,2.47293313946327,4.74529061544512,1.15289268306808,1.00534083520108,1.98956472041151,2.9244613067868,5.39291645192533,4.10662294761919,3.38540164532424,0.189667900953082,0.114248512609729,1.1270773567308,0.203651327845314,0.193952487167626,0.0701358198903186,0.316182685621286,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.335012514883631,0,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0,0.642202359951168,0.820481806145422,0,0,0.315508219416257,0,0.646270193198397,0.238968797952552,0,0.283076530788832,0.404810701674894,0,1.58115111178609,0.963963949265421,0,0,0,0.164970122972535,0,0,0,0,0,0,1.03371317267288,0,0,0,0,0,0.340439605753788,0,0,0,0.354680467284547,0,0.164549020602121,0,1.40803024838226,1.27099242518292,0,0,0.161464426695906,0,0.716234064018819,0.328281799490123,4.08073171281791,0.741701208042039,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0.648032044930808,0.209088296014469,1.74690050996942,0.674321731924103,0.495920734352016,0.26175594198403,4.53652406521275,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.375364950902364,0.183151624267265,0,0,0,0,0,0.515559547031063,0.685082519770642,0,0,0.45032120322422,0,0.51776031175182,0.207574695168353,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0.412070114477788,0,0.505394423527595,0.25347929989024,0.377252682772152,0.0936415074698824,0.448176066834085,0.34461281373368,0.952587382566147,0.115884325944855,0.192909220463705,0.412085900803307,0.441596760403192,1.37147700954166,0.532427418478012,0.476872379894642,0.290692833264657,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0,1.12228454331548,0.118635018124174,0.0985044823755635,0,0.619747364743864,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p@chr1:78306130..78306143,+ | |short_description=p@chr1:78306130..78306143,+ | ||
}} | }} |
Latest revision as of 01:16, 6 August 2015
Short description: | p@chr1:78306130..78306143, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:78306130..78306143, + |
Coexpression cluster: | MCL_coexpression_mm9:412 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.65e-14 | 9 |
epithelial cell of alimentary canal | 2.65e-14 | 9 |
brush border epithelial cell | 9.95e-09 | 6 |
gut absorptive cell | 9.95e-09 | 6 |
enterocyte | 9.95e-09 | 6 |
epithelial cell | 4.60e-08 | 25 |
endo-epithelial cell | 5.40e-08 | 15 |
columnar/cuboidal epithelial cell | 2.02e-07 | 7 |
intestinal crypt stem cell | 2.59e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.50e-50 | 31 |
gastrointestinal system | 1.89e-38 | 47 |
mucosa | 1.11e-25 | 15 |
intestinal mucosa | 6.39e-22 | 13 |
wall of intestine | 6.39e-22 | 13 |
gastrointestinal system mucosa | 6.39e-22 | 13 |
organ component layer | 3.25e-19 | 24 |
endoderm-derived structure | 6.01e-15 | 118 |
endoderm | 6.01e-15 | 118 |
presumptive endoderm | 6.01e-15 | 118 |
epithelium of mucosa | 2.65e-14 | 9 |
gastrointestinal system epithelium | 2.65e-14 | 9 |
intestinal epithelium | 2.65e-14 | 9 |
digestive system | 3.31e-13 | 116 |
digestive tract | 3.31e-13 | 116 |
primitive gut | 3.31e-13 | 116 |
simple columnar epithelium | 1.97e-11 | 11 |
subdivision of digestive tract | 2.18e-11 | 114 |
small intestine | 4.44e-09 | 4 |
ileal mucosa | 5.33e-07 | 3 |
ileum | 5.33e-07 | 3 |
mucosa of small intestine | 5.33e-07 | 3 |
wall of small intestine | 5.33e-07 | 3 |