FFCP PHASE1:Mm9::chr11:53670461..53670487,+: Difference between revisions
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|id=chr11:53670461..53670487,+
|short_description=p@chr11:53670461..53670487,+
|description=CAGE_peak_at_chr11:53670461..53670487,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=906 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:53670461..53670487,+ | |||
|description=CAGE_peak_at_chr11:53670461..53670487,+ | |||
|id=chr11:53670461..53670487,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.59e-16!9;CL:0002251!1.59e-16!9;CL:0000239!3.45e-11!6;CL:0000677!3.45e-11!6;CL:0000212!3.45e-11!6;CL:0000584!3.45e-11!6;CL:0000075!1.88e-09!7;CL:0002076!4.60e-09!15;CL:0000066!4.97e-07!25;CL:0002250!6.46e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.48e-26,9;CL:0002251,6.48e-26,9;CL:0000239,2.98e-15,6;CL:0000677,2.98e-15,6;CL:0000584,2.98e-15,6;CL:0002076,4.12e-15,15;CL:0000075,4.74e-13,7;CL:0002250,1.50e-12,3;CL:0000223,4.73e-11,20;CL:0000066,7.76e-11,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.63e-26!15;UBERON:0001242!2.50e-23!13;UBERON:0000060!2.50e-23!13;UBERON:0001262!2.50e-23!13;UBERON:0004786!2.50e-23!13;UBERON:0000160!6.88e-20!43;UBERON:0005409!7.47e-18!59;UBERON:0001007!3.39e-17!128;UBERON:0001555!3.39e-17!128;UBERON:0007026!3.39e-17!128;UBERON:0004119!9.17e-17!130;UBERON:0000925!9.17e-17!130;UBERON:0006595!9.17e-17!130;UBERON:0003350!1.59e-16!9;UBERON:0004808!1.59e-16!9;UBERON:0001277!1.59e-16!9;UBERON:0004921!2.60e-15!126;UBERON:0004185!2.60e-15!126;UBERON:0004923!5.89e-15!24;UBERON:0000485!3.98e-13!11;UBERON:0005911!1.23e-07!69;UBERON:0003929!5.13e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.78e-40,15;UBERON:0000160,5.80e-37,31;UBERON:0001242,5.16e-34,13;UBERON:0001262,5.16e-34,13;UBERON:0004786,5.16e-34,13;UBERON:0005409,4.85e-26,47;UBERON:0003350,6.48e-26,9;UBERON:0004808,6.48e-26,9;UBERON:0001277,6.48e-26,9;UBERON:0004923,1.99e-24,24;UBERON:0000485,5.22e-21,11;UBERON:0001007,1.49e-13,116;UBERON:0001555,1.49e-13,116;UBERON:0007026,1.49e-13,116;UBERON:0004119,2.93e-13,118;UBERON:0000925,2.93e-13,118;UBERON:0006595,2.93e-13,118;UBERON:0004921,4.05e-11,114;UBERON:0002108,2.50e-09,4;UBERON:0001962,5.81e-08,2;UBERON:0001961,5.81e-08,2;UBERON:0001744,5.81e-08,2 | |||
|phase1_expression=0,1.04692622291808,0.909998478779072,9.67885476181856,6.01074875935617,1.00727563147134,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27993938234725,1.37645568640302,0.57423196411502,0,1.50829862880122,3.42042155021473,6.30075324399827,0.443461021310609,0,0,0,8.66554859253824,2.82598897109437,6.94175811292055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0.258937883647172,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.68553987709211,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5471701023357,1.85115396664481,0,0,0,0,0,0,2.37264530772256,0.164698954724011,0.251335208800269,0.596869416123452,0.779856348476481,1.79763881730844,3.45820879799511,3.18626037206988,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10851914099963,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0.26175594198403,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0,0,0,0.358053391334963,0.39736270956253,0,0.147689527174577,0.201932899896295,0.15241361331,0.201652370273681,0.584747284438515,0.769694733122636,0.701261413089414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,1.04692622291808,0.909998478779072,9.67885476181856,6.01074875935617,1.00727563147134,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27993938234725,1.37645568640302,0.57423196411502,0,1.50829862880122,3.42042155021473,6.30075324399827,0.443461021310609,0,0,0,8.66554859253824,2.82598897109437,6.94175811292055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0.258937883647172,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.68553987709211,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5471701023357,1.85115396664481,0,0,0,0,0,0,2.37264530772256,0.164698954724011,0.251335208800269,0.596869416123452,0.779856348476481,1.79763881730844,3.45820879799511,3.18626037206988,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10851914099963,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0.26175594198403,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0,0,0,0.358053391334963,0.39736270956253,0,0.147689527174577,0.201932899896295,0.15241361331,0.201652370273681,0.584747284438515,0.769694733122636,0.701261413089414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr11:53670461..53670487,+ | |||
}} | }} |
Latest revision as of 01:59, 6 August 2015
Short description: | p@chr11:53670461..53670487, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:53670461..53670487, + |
Coexpression cluster: | MCL_coexpression_mm9:906 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.48e-26 | 9 |
epithelial cell of alimentary canal | 6.48e-26 | 9 |
brush border epithelial cell | 2.98e-15 | 6 |
gut absorptive cell | 2.98e-15 | 6 |
enterocyte | 2.98e-15 | 6 |
endo-epithelial cell | 4.12e-15 | 15 |
columnar/cuboidal epithelial cell | 4.74e-13 | 7 |
intestinal crypt stem cell | 1.50e-12 | 3 |
endodermal cell | 4.73e-11 | 20 |
epithelial cell | 7.76e-11 | 25 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.78e-40 | 15 |
intestine | 5.80e-37 | 31 |
intestinal mucosa | 5.16e-34 | 13 |
wall of intestine | 5.16e-34 | 13 |
gastrointestinal system mucosa | 5.16e-34 | 13 |
gastrointestinal system | 4.85e-26 | 47 |
epithelium of mucosa | 6.48e-26 | 9 |
gastrointestinal system epithelium | 6.48e-26 | 9 |
intestinal epithelium | 6.48e-26 | 9 |
organ component layer | 1.99e-24 | 24 |
simple columnar epithelium | 5.22e-21 | 11 |
digestive system | 1.49e-13 | 116 |
digestive tract | 1.49e-13 | 116 |
primitive gut | 1.49e-13 | 116 |
endoderm-derived structure | 2.93e-13 | 118 |
endoderm | 2.93e-13 | 118 |
presumptive endoderm | 2.93e-13 | 118 |
subdivision of digestive tract | 4.05e-11 | 114 |
small intestine | 2.50e-09 | 4 |
gut-associated lymphoid tissue | 5.81e-08 | 2 |
mucosa-associated lymphoid tissue | 5.81e-08 | 2 |
lymphoid tissue | 5.81e-08 | 2 |