FFCP PHASE1:Mm9::chr16:18408036..18408050,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr16:18408036..18408050,- to FFCP PHASE1:Mm9::chr16:18408036..18408050,-: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=73 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:18408036..18408050,- | |||
|description=CAGE_peak_at_chr16:18408036..18408050,- | |||
|id=chr16:18408036..18408050,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.78e-13,5;CL:0002494,1.57e-11,3;CL:0000737,1.57e-11,3;CL:0000746,1.57e-11,3;CL:0000513,1.57e-11,3;CL:0002092,2.18e-11,3;CL:0002540,2.18e-11,3;CL:0000680,7.76e-10,6;CL:0000187,7.76e-10,6;CL:0000056,7.76e-10,6;CL:0000222,1.92e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!1.14e-07!114;UBERON:0004111!1.86e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.21e-12,22;UBERON:0007499,1.21e-12,22;UBERON:0006925,1.21e-12,22;UBERON:0009497,1.21e-12,22;UBERON:0000015,1.21e-12,22;UBERON:0002423,1.21e-12,22;UBERON:0006235,1.21e-12,22;UBERON:0008835,1.21e-12,22;UBERON:0003894,1.21e-12,22;UBERON:0004161,1.21e-12,22;UBERON:0008836,1.21e-12,22;UBERON:0009854,4.97e-12,23;UBERON:0009856,4.97e-12,23;UBERON:0005256,1.15e-11,45;UBERON:0003914,4.62e-11,47;UBERON:0002365,6.00e-11,25;UBERON:0002330,6.00e-11,25;UBERON:0003104,5.90e-08,61;UBERON:0009142,5.90e-08,61;UBERON:0000490,3.62e-07,66;UBERON:0000025,4.40e-07,114 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0.467225281191051,0.129123323441576,0,0,0,0.0797721589953364,0,0,0.333109761815663,0,0,0.157731082679119,0.137114433605739,0,0.595303031057488,0.297872853602656,0.522399578277871,0.639969691173627,0.45881856213434,0,0,0,0.570070258369122,0.252030129759931,0.221730510655305,0,0.61506478758457,0,0,0.166234645358492,0,0,0,0,0,0,0,1.6366586336825,0.304130793658544,0.183546752161682,0,0,0.219686182734472,0,0.139986421625363,0,0.167782606057736,0,0,1.54355661621568,2.29226751951005,2.06268836910977,0.202316460859598,0,0,0,0,1.7997994345628,2.96659908770092,1.4209602298922,0,0.384218305321555,0,0.675029691658453,0,0,0.441737081903227,0.244981598429908,0,0,0,0.255374676170375,0.46081959976873,0,0.274462930807229,0,0.279182999001381,0.56276261003168,0.30559649555362,0.294628585473668,0.427115042397309,0.186399445825301,0.075726193333184,0,0,8.60423876981386,4.75979933595425,11.873470216032,9.09686984426737,5.82434953226536,1.40444420131752,0.340860645156116,0.779358013808606,0,0.14084341977668,0,0,0,0.649473123033642,0,0,1.37020655662872,0,0.742210695324124,0,0,0,0.150722640552623,0,0.376999773989026,0,0.289198713839823,0.884610551949874,0,0,0,0,0.292780797011547,0.209446706813455,0.255457055208591,0,0,0.254140454146129,0.449371918214468,1.37250180845588,0.251308704225729,0.347648640384553,0.255715457330331,0.41557608911912,0.162241263067758,0.203678727700633,0.248813941220186,0.758168275301024,0.631325567659422,0,0,0.180062129805349,0.30140963567143,0.204109497453984,0,0.0937017245597288,0,0,0.378212160335639,0,0,0.556094498451196,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0.232533944750408,0.268273401399619,0,0.16455984991348,0,0.243206428637567,0.292399974850665,0.439100230582101,0.402619256281115,0,0.205809224758569,0.660837565967596,0,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0,0,0,0.754005626400808,0.795825888164603,0,0.898819408654221,0,0.597423819763102,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0.140271639780637,0.189709611372772,0.295220295959204,0.627994911365499,0,4.15033677922008,0,0.196558995113203,0,0.608580364165509,0,0,0.287696137450811,0.810676133875177,0.823684239564244,4.31304619582064,0.744281895337007,1.24815069245824,0.505157755894224,1.79397413521912,0,0,0,0.162964976442026,0.509235257325564,0,0.167506257441816,0.476087281772027,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,1.50791283939272,0.54390568381871,0.491764273019036,0,0.642202359951168,0,0.163934945376675,0,0,0.390438744296638,0.430846795465598,0,0,0.566153061577665,0.809621403349789,0.584511715822624,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0.340439605753788,0.36012218806262,0,0,0,0.356737635204141,0.164549020602121,0.304464949114599,0,0.42366414172764,0.882113592219848,0.16488625294148,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0.370389054739423,0,0.410082683163076,0.228778173206523,0,0.139951452323658,0,0,0,0,0,0,0.218362563746178,0.269728692769641,0.165306911450672,0,0.388844919875379,0,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0.419437377702843,0,0.288030006257865,0,0,0.513554785824136,0.51968329191118,0,0.198681354781265,0.120195449519969,0,0,0,0.100826185136841,0.0974578807397524,0,0.233753804363138,0.226730383615211,0,0.179427713218951,0,0.19318959403219,0,0,0.214368379079066,0,0.564751842617067,0.460325236507177,2.29158205375759,0.343706364687375,0.685082519770642,0,2.02506750069542,1.80128481289688,0.453142408984205,1.03552062350364,0,0,0,0,0,0.183843508450014,0.222246727801615,0.412070114477788,0.64183841918363,0.252697211763798,0,0,0.187283014939765,0.0640251524048693,0,0.476293691283074,0.231768651889711,0,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0,0,0,0,0,1.12228454331548,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0 | |phase1_expression=0,0,0,0.30246421130683,0,0,0.467225281191051,0.129123323441576,0,0,0,0.0797721589953364,0,0,0.333109761815663,0,0,0.157731082679119,0.137114433605739,0,0.595303031057488,0.297872853602656,0.522399578277871,0.639969691173627,0.45881856213434,0,0,0,0.570070258369122,0.252030129759931,0.221730510655305,0,0.61506478758457,0,0,0.166234645358492,0,0,0,0,0,0,0,1.6366586336825,0.304130793658544,0.183546752161682,0,0,0.219686182734472,0,0.139986421625363,0,0.167782606057736,0,0,1.54355661621568,2.29226751951005,2.06268836910977,0.202316460859598,0,0,0,0,1.7997994345628,2.96659908770092,1.4209602298922,0,0.384218305321555,0,0.675029691658453,0,0,0.441737081903227,0.244981598429908,0,0,0,0.255374676170375,0.46081959976873,0,0.274462930807229,0,0.279182999001381,0.56276261003168,0.30559649555362,0.294628585473668,0.427115042397309,0.186399445825301,0.075726193333184,0,0,8.60423876981386,4.75979933595425,11.873470216032,9.09686984426737,5.82434953226536,1.40444420131752,0.340860645156116,0.779358013808606,0,0.14084341977668,0,0,0,0.649473123033642,0,0,1.37020655662872,0,0.742210695324124,0,0,0,0.150722640552623,0,0.376999773989026,0,0.289198713839823,0.884610551949874,0,0,0,0,0.292780797011547,0.209446706813455,0.255457055208591,0,0,0.254140454146129,0.449371918214468,1.37250180845588,0.251308704225729,0.347648640384553,0.255715457330331,0.41557608911912,0.162241263067758,0.203678727700633,0.248813941220186,0.758168275301024,0.631325567659422,0,0,0.180062129805349,0.30140963567143,0.204109497453984,0,0.0937017245597288,0,0,0.378212160335639,0,0,0.556094498451196,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0.232533944750408,0.268273401399619,0,0.16455984991348,0,0.243206428637567,0.292399974850665,0.439100230582101,0.402619256281115,0,0.205809224758569,0.660837565967596,0,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0,0,0,0.754005626400808,0.795825888164603,0,0.898819408654221,0,0.597423819763102,0.379335801906163,0.228497025219458,0,0,0.193952487167626,0.140271639780637,0.189709611372772,0.295220295959204,0.627994911365499,0,4.15033677922008,0,0.196558995113203,0,0.608580364165509,0,0,0.287696137450811,0.810676133875177,0.823684239564244,4.31304619582064,0.744281895337007,1.24815069245824,0.505157755894224,1.79397413521912,0,0,0,0.162964976442026,0.509235257325564,0,0.167506257441816,0.476087281772027,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,1.50791283939272,0.54390568381871,0.491764273019036,0,0.642202359951168,0,0.163934945376675,0,0,0.390438744296638,0.430846795465598,0,0,0.566153061577665,0.809621403349789,0.584511715822624,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0.340439605753788,0.36012218806262,0,0,0,0.356737635204141,0.164549020602121,0.304464949114599,0,0.42366414172764,0.882113592219848,0.16488625294148,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0.370389054739423,0,0.410082683163076,0.228778173206523,0,0.139951452323658,0,0,0,0,0,0,0.218362563746178,0.269728692769641,0.165306911450672,0,0.388844919875379,0,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0.419437377702843,0,0.288030006257865,0,0,0.513554785824136,0.51968329191118,0,0.198681354781265,0.120195449519969,0,0,0,0.100826185136841,0.0974578807397524,0,0.233753804363138,0.226730383615211,0,0.179427713218951,0,0.19318959403219,0,0,0.214368379079066,0,0.564751842617067,0.460325236507177,2.29158205375759,0.343706364687375,0.685082519770642,0,2.02506750069542,1.80128481289688,0.453142408984205,1.03552062350364,0,0,0,0,0,0.183843508450014,0.222246727801615,0.412070114477788,0.64183841918363,0.252697211763798,0,0,0.187283014939765,0.0640251524048693,0,0.476293691283074,0.231768651889711,0,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0,0,0,0,0,1.12228454331548,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0 | ||
|short_description=p@chr16:18408036..18408050,- | |||
}} | }} |
Latest revision as of 03:06, 6 August 2015
Short description: | p@chr16:18408036..18408050, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:18408036..18408050, - |
Coexpression cluster: | MCL_coexpression_mm9:73 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.78e-13 | 5 |
cardiocyte | 1.57e-11 | 3 |
striated muscle cell | 1.57e-11 | 3 |
cardiac muscle cell | 1.57e-11 | 3 |
cardiac muscle myoblast | 1.57e-11 | 3 |
bone marrow cell | 2.18e-11 | 3 |
mesenchymal stem cell of the bone marrow | 2.18e-11 | 3 |
muscle precursor cell | 7.76e-10 | 6 |
muscle cell | 7.76e-10 | 6 |
myoblast | 7.76e-10 | 6 |
mesodermal cell | 1.92e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
liver | 1.21e-12 | 22 |
epithelial sac | 1.21e-12 | 22 |
digestive gland | 1.21e-12 | 22 |
epithelium of foregut-midgut junction | 1.21e-12 | 22 |
anatomical boundary | 1.21e-12 | 22 |
hepatobiliary system | 1.21e-12 | 22 |
foregut-midgut junction | 1.21e-12 | 22 |
hepatic diverticulum | 1.21e-12 | 22 |
liver primordium | 1.21e-12 | 22 |
septum transversum | 1.21e-12 | 22 |
liver bud | 1.21e-12 | 22 |
digestive tract diverticulum | 4.97e-12 | 23 |
sac | 4.97e-12 | 23 |
trunk mesenchyme | 1.15e-11 | 45 |
epithelial tube | 4.62e-11 | 47 |
exocrine gland | 6.00e-11 | 25 |
exocrine system | 6.00e-11 | 25 |
mesenchyme | 5.90e-08 | 61 |
entire embryonic mesenchyme | 5.90e-08 | 61 |
unilaminar epithelium | 3.62e-07 | 66 |
tube | 4.40e-07 | 114 |