FFCP PHASE1:Mm9::chr11:58200317..58200326,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1913 | |MCL_coexpression_id=1913 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:58200317..58200326,+ | |||
|description=CAGE_peak_at_chr11:58200317..58200326,+ | |description=CAGE_peak_at_chr11:58200317..58200326,+ | ||
|id=chr11:58200317..58200326,+ | |id=chr11:58200317..58200326,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.13e-16!9;CL:0002251!1.13e-16!9;CL:0000239!6.99e-15!6;CL:0000677!6.99e-15!6;CL:0000212!6.99e-15!6;CL:0000584!6.99e-15!6;CL:0000075!1.19e-12!7;CL:0002076!1.93e-09!15;CL:0000066!3.56e-08!25;CL:0000223!9.75e-07!20 | |ontology_enrichment_celltype=CL:0002563!1.13e-16!9;CL:0002251!1.13e-16!9;CL:0000239!6.99e-15!6;CL:0000677!6.99e-15!6;CL:0000212!6.99e-15!6;CL:0000584!6.99e-15!6;CL:0000075!1.19e-12!7;CL:0002076!1.93e-09!15;CL:0000066!3.56e-08!25;CL:0000223!9.75e-07!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.40e-20,6;CL:0000677,4.40e-20,6;CL:0000584,4.40e-20,6;CL:0000075,3.28e-17,7;CL:0002563,2.26e-13,9;CL:0002251,2.26e-13,9;CL:0000066,8.01e-09,25;CL:0002076,5.64e-08,15;CL:0000682,2.23e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.78e-33!43;UBERON:0005409!3.84e-31!59;UBERON:0000344!8.16e-31!15;UBERON:0001242!6.99e-26!13;UBERON:0000060!6.99e-26!13;UBERON:0001262!6.99e-26!13;UBERON:0004786!6.99e-26!13;UBERON:0004923!5.35e-18!24;UBERON:0003350!1.13e-16!9;UBERON:0004808!1.13e-16!9;UBERON:0001277!1.13e-16!9;UBERON:0000485!2.20e-13!11;UBERON:0001007!4.36e-13!128;UBERON:0001555!4.36e-13!128;UBERON:0007026!4.36e-13!128;UBERON:0004119!8.89e-13!130;UBERON:0000925!8.89e-13!130;UBERON:0006595!8.89e-13!130;UBERON:0004921!4.92e-11!126;UBERON:0004185!4.92e-11!126;UBERON:0000331!4.77e-09!3;UBERON:0002116!4.77e-09!3;UBERON:0001204!4.77e-09!3;UBERON:0001168!4.77e-09!3 | |ontology_enrichment_uberon=UBERON:0000160!7.78e-33!43;UBERON:0005409!3.84e-31!59;UBERON:0000344!8.16e-31!15;UBERON:0001242!6.99e-26!13;UBERON:0000060!6.99e-26!13;UBERON:0001262!6.99e-26!13;UBERON:0004786!6.99e-26!13;UBERON:0004923!5.35e-18!24;UBERON:0003350!1.13e-16!9;UBERON:0004808!1.13e-16!9;UBERON:0001277!1.13e-16!9;UBERON:0000485!2.20e-13!11;UBERON:0001007!4.36e-13!128;UBERON:0001555!4.36e-13!128;UBERON:0007026!4.36e-13!128;UBERON:0004119!8.89e-13!130;UBERON:0000925!8.89e-13!130;UBERON:0006595!8.89e-13!130;UBERON:0004921!4.92e-11!126;UBERON:0004185!4.92e-11!126;UBERON:0000331!4.77e-09!3;UBERON:0002116!4.77e-09!3;UBERON:0001204!4.77e-09!3;UBERON:0001168!4.77e-09!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.69e-32,15;UBERON:0001242,1.26e-23,13;UBERON:0001262,1.26e-23,13;UBERON:0004786,1.26e-23,13;UBERON:0000160,5.31e-21,31;UBERON:0004923,1.53e-19,24;UBERON:0005409,1.28e-18,47;UBERON:0000331,2.30e-16,3;UBERON:0002116,2.30e-16,3;UBERON:0001204,2.30e-16,3;UBERON:0001168,2.30e-16,3;UBERON:0003350,2.26e-13,9;UBERON:0004808,2.26e-13,9;UBERON:0001277,2.26e-13,9;UBERON:0002108,2.07e-12,4;UBERON:0001962,2.76e-11,2;UBERON:0001961,2.76e-11,2;UBERON:0001744,2.76e-11,2;UBERON:0000485,6.34e-11,11;UBERON:0001007,9.98e-09,116;UBERON:0001555,9.98e-09,116;UBERON:0007026,9.98e-09,116;UBERON:0004119,1.54e-08,118;UBERON:0000925,1.54e-08,118;UBERON:0006595,1.54e-08,118;UBERON:0002465,8.36e-08,3 | |||
|phase1_expression=0,1.74487703819681,1.81999695755814,2.11724947914781,1.50268718983904,0.671517087647559,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63978026100879,2.98232065387321,0,1.7230479846363,2.37018355954478,9.88121781173144,3.52842181663903,3.99114919179548,0,0,0,0.866554859253824,0.831173226792462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0.128867461322093,1.21010114774006,0.667134131534611,0.380451252225118,0.949058123089023,0.823494773620054,0,0.596869416123452,0.974820435595601,2.69645822596266,1.51296634912286,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,4.77335309007557,0,0,0.216010681643603,0,0,0,0,0.26175594198403,3.6292192521702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,1.74487703819681,1.81999695755814,2.11724947914781,1.50268718983904,0.671517087647559,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63978026100879,2.98232065387321,0,1.7230479846363,2.37018355954478,9.88121781173144,3.52842181663903,3.99114919179548,0,0,0,0.866554859253824,0.831173226792462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.528901133327089,0,0,0.128867461322093,1.21010114774006,0.667134131534611,0.380451252225118,0.949058123089023,0.823494773620054,0,0.596869416123452,0.974820435595601,2.69645822596266,1.51296634912286,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,4.77335309007557,0,0,0.216010681643603,0,0,0,0,0.26175594198403,3.6292192521702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr11:58200317..58200326,+ | |short_description=p@chr11:58200317..58200326,+ | ||
}} | }} |
Latest revision as of 04:10, 6 August 2015
Short description: | p@chr11:58200317..58200326, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:58200317..58200326, + |
Coexpression cluster: | MCL_coexpression_mm9:1913 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.40e-20 | 6 |
gut absorptive cell | 4.40e-20 | 6 |
enterocyte | 4.40e-20 | 6 |
columnar/cuboidal epithelial cell | 3.28e-17 | 7 |
intestinal epithelial cell | 2.26e-13 | 9 |
epithelial cell of alimentary canal | 2.26e-13 | 9 |
epithelial cell | 8.01e-09 | 25 |
endo-epithelial cell | 5.64e-08 | 15 |
M cell of gut | 2.23e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.69e-32 | 15 |
intestinal mucosa | 1.26e-23 | 13 |
wall of intestine | 1.26e-23 | 13 |
gastrointestinal system mucosa | 1.26e-23 | 13 |
intestine | 5.31e-21 | 31 |
organ component layer | 1.53e-19 | 24 |
gastrointestinal system | 1.28e-18 | 47 |
ileal mucosa | 2.30e-16 | 3 |
ileum | 2.30e-16 | 3 |
mucosa of small intestine | 2.30e-16 | 3 |
wall of small intestine | 2.30e-16 | 3 |
epithelium of mucosa | 2.26e-13 | 9 |
gastrointestinal system epithelium | 2.26e-13 | 9 |
intestinal epithelium | 2.26e-13 | 9 |
small intestine | 2.07e-12 | 4 |
gut-associated lymphoid tissue | 2.76e-11 | 2 |
mucosa-associated lymphoid tissue | 2.76e-11 | 2 |
lymphoid tissue | 2.76e-11 | 2 |
simple columnar epithelium | 6.34e-11 | 11 |
digestive system | 9.98e-09 | 116 |
digestive tract | 9.98e-09 | 116 |
primitive gut | 9.98e-09 | 116 |
endoderm-derived structure | 1.54e-08 | 118 |
endoderm | 1.54e-08 | 118 |
presumptive endoderm | 1.54e-08 | 118 |
lymphoid system | 8.36e-08 | 3 |