FFCP PHASE1:Mm9::chr18:79454961..79454965,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:79454961..79454965,+
|short_description=p@chr18:79454961..79454965,+
|description=CAGE_peak_at_chr18:79454961..79454965,+
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:79454961..79454965,+ | |||
|description=CAGE_peak_at_chr18:79454961..79454965,+ | |||
|id=chr18:79454961..79454965,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.11e-08!32;CL:0002032!1.11e-08!32;CL:0000037!1.11e-08!32;CL:0000566!1.11e-08!32;CL:0000837!1.11e-08!32;CL:0000084!2.32e-08!11;CL:0000827!2.32e-08!11;CL:0000838!1.80e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.53e-07,1;CL:0000355,7.19e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.72e-19,3;DOID:4045,1.72e-19,3;DOID:0050686,4.75e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0002193!3.51e-10!48;UBERON:0002390!4.07e-10!45;UBERON:0003061!4.07e-10!45;UBERON:0004177!7.73e-10!29;UBERON:0002405!7.33e-09!70;UBERON:0006562!2.27e-08!24;UBERON:0001557!2.27e-08!24;UBERON:0001042!2.27e-08!24;UBERON:0008814!2.27e-08!24;UBERON:0009145!2.27e-08!24;UBERON:0003081!3.69e-08!88;UBERON:0002370!1.05e-07!23;UBERON:0000974!1.05e-07!23;UBERON:0004807!1.05e-07!23;UBERON:0005058!1.05e-07!23;UBERON:0003351!1.05e-07!23;UBERON:0009113!1.05e-07!23;UBERON:0003295!1.05e-07!23;UBERON:0009722!1.05e-07!23;UBERON:0005562!1.05e-07!23;UBERON:0007690!1.05e-07!23;UBERON:0005057!1.37e-07!51;UBERON:0003408!3.19e-07!24;UBERON:0000072!5.56e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.74e-07,1;UBERON:0001097,2.74e-07,1;UBERON:0003968,2.74e-07,1;UBERON:0001467,2.74e-07,1;UBERON:0001134,7.19e-07,9;UBERON:0002036,7.19e-07,9;UBERON:0002385,7.19e-07,9;UBERON:0000486,7.19e-07,9;UBERON:0007503,7.19e-07,9;UBERON:0001015,7.19e-07,9;UBERON:0002329,7.19e-07,9;UBERON:0003082,7.19e-07,9;UBERON:0003059,7.19e-07,9;UBERON:0007282,7.19e-07,9;UBERON:0004290,7.19e-07,9;UBERON:0009618,7.19e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0.84473233291,0.936258105287974,0.171217968225505,0,0.342401459862411,0.174840804837995,0,0,0,0.157731082679119,0.548457734422955,0,0,5.95745707205312,6.79119451761232,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,4.60384793810598,1.5626706890476,4.71171369576418,45.2938245783881,7.5135003345429,8.73918635456076,0.125896817975577,0,0,0,0,0,0,0,0,0,0,1.68046899571232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0.148442139064825,0,0,0,0,0,0,0.247194967734374,0.144599356919912,1.76922110389975,0,0.220841518460394,0,0,0,0,0,0.239630249011841,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.28673953557358,0.568326998791185,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0,0.252578877947112,0,0,0.739012760666419,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,1.63171705145613,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0.354680467284547,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,0.341741761595705,0.412773735926445,0,0,0.27338845544205,0.915112692826091,0.679913719975421,0.419854356970974,0.690999869022119,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.632022241256357,1.01362607645082,0.205421914329655,0,0.537080087002444,0.79472541912506,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0,0.192423683280659,0.233753804363138,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0.84473233291,0.936258105287974,0.171217968225505,0,0.342401459862411,0.174840804837995,0,0,0,0.157731082679119,0.548457734422955,0,0,5.95745707205312,6.79119451761232,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,4.60384793810598,1.5626706890476,4.71171369576418,45.2938245783881,7.5135003345429,8.73918635456076,0.125896817975577,0,0,0,0,0,0,0,0,0,0,1.68046899571232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0.148442139064825,0,0,0,0,0,0,0.247194967734374,0.144599356919912,1.76922110389975,0,0.220841518460394,0,0,0,0,0,0.239630249011841,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.28673953557358,0.568326998791185,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0,0.252578877947112,0,0,0.739012760666419,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,1.63171705145613,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0.354680467284547,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0,0.341741761595705,0.412773735926445,0,0,0.27338845544205,0.915112692826091,0.679913719975421,0.419854356970974,0.690999869022119,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.632022241256357,1.01362607645082,0.205421914329655,0,0.537080087002444,0.79472541912506,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0,0.192423683280659,0.233753804363138,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p@chr18:79454961..79454965,+ | |||
}} | }} |
Latest revision as of 04:15, 6 August 2015
Short description: | p@chr18:79454961..79454965, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:79454961..79454965, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.53e-07 | 1 |
multi-potent skeletal muscle stem cell | 7.19e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lymph node | 2.74e-07 | 1 |
axillary lymph node | 2.74e-07 | 1 |
peripheral lymph node | 2.74e-07 | 1 |
shoulder | 2.74e-07 | 1 |
skeletal muscle tissue | 7.19e-07 | 9 |
striated muscle tissue | 7.19e-07 | 9 |
muscle tissue | 7.19e-07 | 9 |
multilaminar epithelium | 7.19e-07 | 9 |
epithelial vesicle | 7.19e-07 | 9 |
musculature | 7.19e-07 | 9 |
somite | 7.19e-07 | 9 |
myotome | 7.19e-07 | 9 |
presomitic mesoderm | 7.19e-07 | 9 |
presumptive segmental plate | 7.19e-07 | 9 |
dermomyotome | 7.19e-07 | 9 |
trunk paraxial mesoderm | 7.19e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.72e-19 | 3 |
muscle cancer | 1.72e-19 | 3 |
organ system cancer | 4.75e-10 | 6 |