FFCP PHASE1:Mm9::chr16:21868045..21868054,+: Difference between revisions
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|id=chr16:21868045..21868054,+
|short_description=p@chr16:21868045..21868054,+
|description=CAGE_peak_at_chr16:21868045..21868054,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=516 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:21868045..21868054,+ | |||
|description=CAGE_peak_at_chr16:21868045..21868054,+ | |||
|id=chr16:21868045..21868054,+ | |||
|ontology_enrichment_celltype=CL:0000239!4.99e-10!6;CL:0000677!4.99e-10!6;CL:0000212!4.99e-10!6;CL:0000584!4.99e-10!6;CL:0000075!2.00e-08!7;CL:0002563!5.37e-08!9;CL:0002251!5.37e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.47e-19,6;CL:0000677,1.47e-19,6;CL:0000584,1.47e-19,6;CL:0000075,1.10e-16,7;CL:0002563,7.61e-13,9;CL:0002251,7.61e-13,9;CL:0000682,1.22e-09,3;CL:0000066,5.37e-09,25;CL:0002076,1.86e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.47e-22!43;UBERON:0000344!9.27e-16!15;UBERON:0005409!7.08e-15!59;UBERON:0001242!4.38e-13!13;UBERON:0000060!4.38e-13!13;UBERON:0001262!4.38e-13!13;UBERON:0004786!4.38e-13!13;UBERON:0001007!2.73e-10!128;UBERON:0001555!2.73e-10!128;UBERON:0007026!2.73e-10!128;UBERON:0004119!5.86e-10!130;UBERON:0000925!5.86e-10!130;UBERON:0006595!5.86e-10!130;UBERON:0004921!5.82e-09!126;UBERON:0004185!5.82e-09!126;UBERON:0004923!1.86e-08!24;UBERON:0003350!5.37e-08!9;UBERON:0004808!5.37e-08!9;UBERON:0001277!5.37e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,9.40e-25,15;UBERON:0000160,5.72e-21,31;UBERON:0001242,2.28e-19,13;UBERON:0001262,2.28e-19,13;UBERON:0004786,2.28e-19,13;UBERON:0004923,1.09e-14,24;UBERON:0003350,7.61e-13,9;UBERON:0004808,7.61e-13,9;UBERON:0001277,7.61e-13,9;UBERON:0005409,8.69e-13,47;UBERON:0000485,2.13e-10,11;UBERON:0001007,3.22e-08,116;UBERON:0001555,3.22e-08,116;UBERON:0007026,3.22e-08,116;UBERON:0004119,5.23e-08,118;UBERON:0000925,5.23e-08,118;UBERON:0006595,5.23e-08,118;UBERON:0002108,9.32e-08,4;UBERON:0001962,2.27e-07,2;UBERON:0001961,2.27e-07,2;UBERON:0001744,2.27e-07,2 | |||
|phase1_expression=0,4.18770489167233,5.0049916332849,3.93203474698879,6.51164448930251,1.00727563147134,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,1.59992422793407,2.06468352960453,1.14846392823004,1.7230479846363,1.07735616342945,1.14014051673824,3.52842181663903,0.665191531965914,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60837565967596,0.528901133327089,0,0,0,0.80673409849337,0.22237804384487,0.760902504450237,1.89811624617805,0.329397909448022,0.251335208800269,1.79060824837036,1.36474860983384,0.898819408654221,0.864552199498777,2.38969527905241,0,0.114248512609729,0,0,0.581857461502877,0.631222379012867,1.45444035385792,5.01874503130647,3.29697328466887,7.03363834354263,0,0,0,0,0,0.241177159752417,0.25462585178142,0.863088412352432,1.29708181420028,1.09824565275233,0,2.60498663367952,0.936113019343682,1.01031551178845,0.358794827043824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485561272309963,0.302323556964751,0,0,0,0.516856586336442,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,4.18770489167233,5.0049916332849,3.93203474698879,6.51164448930251,1.00727563147134,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,1.59992422793407,2.06468352960453,1.14846392823004,1.7230479846363,1.07735616342945,1.14014051673824,3.52842181663903,0.665191531965914,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60837565967596,0.528901133327089,0,0,0,0.80673409849337,0.22237804384487,0.760902504450237,1.89811624617805,0.329397909448022,0.251335208800269,1.79060824837036,1.36474860983384,0.898819408654221,0.864552199498777,2.38969527905241,0,0.114248512609729,0,0,0.581857461502877,0.631222379012867,1.45444035385792,5.01874503130647,3.29697328466887,7.03363834354263,0,0,0,0,0,0.241177159752417,0.25462585178142,0.863088412352432,1.29708181420028,1.09824565275233,0,2.60498663367952,0.936113019343682,1.01031551178845,0.358794827043824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485561272309963,0.302323556964751,0,0,0,0.516856586336442,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr16:21868045..21868054,+ | |||
}} | }} |
Latest revision as of 04:32, 6 August 2015
Short description: | p@chr16:21868045..21868054, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:21868045..21868054, + |
Coexpression cluster: | MCL_coexpression_mm9:516 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.47e-19 | 6 |
gut absorptive cell | 1.47e-19 | 6 |
enterocyte | 1.47e-19 | 6 |
columnar/cuboidal epithelial cell | 1.10e-16 | 7 |
intestinal epithelial cell | 7.61e-13 | 9 |
epithelial cell of alimentary canal | 7.61e-13 | 9 |
M cell of gut | 1.22e-09 | 3 |
epithelial cell | 5.37e-09 | 25 |
endo-epithelial cell | 1.86e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 9.40e-25 | 15 |
intestine | 5.72e-21 | 31 |
intestinal mucosa | 2.28e-19 | 13 |
wall of intestine | 2.28e-19 | 13 |
gastrointestinal system mucosa | 2.28e-19 | 13 |
organ component layer | 1.09e-14 | 24 |
epithelium of mucosa | 7.61e-13 | 9 |
gastrointestinal system epithelium | 7.61e-13 | 9 |
intestinal epithelium | 7.61e-13 | 9 |
gastrointestinal system | 8.69e-13 | 47 |
simple columnar epithelium | 2.13e-10 | 11 |
digestive system | 3.22e-08 | 116 |
digestive tract | 3.22e-08 | 116 |
primitive gut | 3.22e-08 | 116 |
endoderm-derived structure | 5.23e-08 | 118 |
endoderm | 5.23e-08 | 118 |
presumptive endoderm | 5.23e-08 | 118 |
small intestine | 9.32e-08 | 4 |
gut-associated lymphoid tissue | 2.27e-07 | 2 |
mucosa-associated lymphoid tissue | 2.27e-07 | 2 |
lymphoid tissue | 2.27e-07 | 2 |