FFCP PHASE1:Mm9::chr11:60166371..60166398,-: Difference between revisions
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{{FFCP|EntrezGene=216810|HGNC=|MCL_coexpression_id=1295|UniProt=Q5SRX1|association_with_transcript=0bp_to_ENSMUST00000063998_5end|description=CAGE_peak_1_at_Tom1l2_5end|id=chr11:60166371..60166398,-|ontology_enrichment_celltype=CL:0000055!1.19e-07!50;CL:0002319!1.66e-07!43;CL:0000221!2.27e-07!44;CL:0000133!2.27e-07!44|ontology_enrichment_celltype_v019_2=CL:0002319,1.66e-07,43;CL:0000221,2.27e-07,44;CL:0000133,2.27e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.33e-18!75;UBERON:0001016!5.33e-18!75;UBERON:0004121!1.97e-17!102;UBERON:0000924!1.97e-17!102;UBERON:0006601!1.97e-17!102;UBERON:0001017!2.25e-17!73;UBERON:0005743!2.25e-17!73;UBERON:0000955!1.60e-13!50;UBERON:0006238!1.60e-13!50;UBERON:0001049!2.32e-13!52;UBERON:0005068!2.32e-13!52;UBERON:0006241!2.32e-13!52;UBERON:0007135!2.32e-13!52;UBERON:0002616!5.12e-13!49;UBERON:0000033!8.13e-12!63;UBERON:0002346!2.88e-10!71;UBERON:0003075!2.88e-10!71;UBERON:0007284!2.88e-10!71;UBERON:0002020!5.75e-10!34;UBERON:0007023!1.68e-09!51;UBERON:0003080!8.91e-09!40;UBERON:0002791!1.10e-08!29;UBERON:0003528!1.10e-08!29;UBERON:0001893!1.10e-08!29;UBERON:0002780!2.85e-08!39;UBERON:0001890!2.85e-08!39;UBERON:0006240!2.85e-08!39;UBERON:0004111!1.04e-07!122;UBERON:0002021!3.44e-07!10;UBERON:0000411!3.44e-07!10;UBERON:0001950!3.44e-07!10;UBERON:0003056!5.82e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.49e-18,95;UBERON:0000924,4.49e-18,95;UBERON:0006601,4.49e-18,95;UBERON:0001016,5.33e-18,75;UBERON:0001017,2.25e-17,73;UBERON:0000073,2.00e-14,54;UBERON:0001049,2.32e-13,52;UBERON:0005068,2.32e-13,52;UBERON:0006241,2.32e-13,52;UBERON:0007135,2.32e-13,52;UBERON:0000955,7.00e-12,47;UBERON:0006238,7.00e-12,47;UBERON:0010371,7.28e-12,73;UBERON:0002616,2.15e-11,46;UBERON:0010314,2.22e-11,92;UBERON:0002346,6.65e-11,64;UBERON:0003075,6.65e-11,64;UBERON:0007284,6.65e-11,64;UBERON:0002020,5.75e-10,34;UBERON:0007023,1.68e-09,51;UBERON:0003080,8.91e-09,40;UBERON:0003528,1.10e-08,29;UBERON:0002791,1.10e-08,29;UBERON:0001893,1.10e-08,29;UBERON:0002780,2.85e-08,39;UBERON:0001890,2.85e-08,39;UBERON:0006240,2.85e-08,39;UBERON:0004111,1.04e-07,122;UBERON:0002021,3.44e-07,10;UBERON:0000411,3.44e-07,10;UBERON:0001950,3.44e-07,10;UBERON:0003056,5.82e-07,49|phase1_expression=31.5493228796444,182.514138195386,184.729691192152,222.613659521827,244.437116213817,35.5904056453206,32.2385444021825,25.6955413648737,5.490760163915,6.78787126333781,3.93801326918661,3.11111420081812,11.8128503652532,14.5992072039726,7.32841475994458,3.84703008040669,4.19737126876888,8.20201629931418,10.6949258212476,11.0341309467488,46.7738095830884,7.84398514486994,7.31359409589019,37.5982193564506,37.6231220950159,106.807145325394,79.2602072932698,65.5032547365103,51.4963466726773,54.690538157905,25.2772782147047,12.065582795733,8.61090702618398,15.8481681015439,11.2652131702997,8.97667084935859,16.1293791447272,10.0447591376858,7.813353445238,2.61761871986899,71.1760100517527,6.14740936462601,8.25367600152961,37.8949422106488,41.6659187312205,34.3232426542344,49.2906546939265,42.5149054941871,83.9201218045682,65.3284460889592,31.7769177089573,43.1257693094915,7.55021727259814,16.6833292662609,12.0993767691287,21.3525331909836,26.0745430344269,35.0657022748661,37.6308617198852,40.2033144246745,41.8328726314078,43.3721001048489,27.5681386794453,14.3983954765024,12.8552627133707,23.4458437932213,61.7176227667914,76.0752244536678,22.7080250955566,23.8960510847092,22.7150958259493,59.7010557403949,50.7997644188711,18.618601480673,22.6195311603038,21.1420320920305,106.812404569407,104.065180539428,107.52457327937,36.4006154135335,38.0588597386024,32.8175423450759,117.25685958058,78.2240027944035,91.8317469138629,37.7124589406295,40.0064423045479,38.2118863941866,44.0726445199131,40.8086424576642,51.0161500114953,21.5105969245347,10.879541339324,13.4925797909454,20.1430689408777,26.4335863387428,30.4764391685902,17.0430322578058,10.3914401841148,19.7870161725791,23.380007682929,26.9485602570067,50.9610479413291,21.3320010945999,6.061749148314,7.34743609877786,7.58286667522175,34.3693477954371,15.7952109024775,52.2516329508183,15.4401940821861,19.485790611977,22.3697032338377,19.1417753501831,28.1037010054335,38.0769771728917,50.6749683855466,48.4407845681704,22.9998743506967,26.5297633913751,28.4885558813908,23.7588874036259,55.9175283654366,93.9826358407066,83.5692360185686,56.4560092010987,8.02761334189666,4.19931911695385,4.82866862877646,111.594026356593,90.1276187552694,32.418822845119,118.37436205094,117.884825829282,118.439185398949,88.9082121611312,24.5432866879262,22.8908825922571,22.2396027421634,33.2498132300629,10.539755879979,12.8745178482745,14.2249082546226,18.3859877759572,25.9219061766559,25.2384028961154,25.6742725293657,49.153640440413,8.191583731448,14.3720620927543,12.1406275673125,13.8093311429372,18.3511184488895,36.9147296513497,29.221063369928,13.733364410476,2.80885274925294,2.05878325691772,5.39910648851626,19.4698226183372,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:216810 | |||
|HGNC= | |||
|MCL_coexpression_id=1295 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q5SRX1 | |||
|association_with_transcript=0bp_to_ENSMUST00000063998_5end | |||
|cluster_id=chr11:60166371..60166398,- | |||
|description=CAGE_peak_1_at_Tom1l2_5end | |||
|id=chr11:60166371..60166398,- | |||
|ontology_enrichment_celltype=CL:0000055!1.19e-07!50;CL:0002319!1.66e-07!43;CL:0000221!2.27e-07!44;CL:0000133!2.27e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.66e-07,43;CL:0000221,2.27e-07,44;CL:0000133,2.27e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.33e-18!75;UBERON:0001016!5.33e-18!75;UBERON:0004121!1.97e-17!102;UBERON:0000924!1.97e-17!102;UBERON:0006601!1.97e-17!102;UBERON:0001017!2.25e-17!73;UBERON:0005743!2.25e-17!73;UBERON:0000955!1.60e-13!50;UBERON:0006238!1.60e-13!50;UBERON:0001049!2.32e-13!52;UBERON:0005068!2.32e-13!52;UBERON:0006241!2.32e-13!52;UBERON:0007135!2.32e-13!52;UBERON:0002616!5.12e-13!49;UBERON:0000033!8.13e-12!63;UBERON:0002346!2.88e-10!71;UBERON:0003075!2.88e-10!71;UBERON:0007284!2.88e-10!71;UBERON:0002020!5.75e-10!34;UBERON:0007023!1.68e-09!51;UBERON:0003080!8.91e-09!40;UBERON:0002791!1.10e-08!29;UBERON:0003528!1.10e-08!29;UBERON:0001893!1.10e-08!29;UBERON:0002780!2.85e-08!39;UBERON:0001890!2.85e-08!39;UBERON:0006240!2.85e-08!39;UBERON:0004111!1.04e-07!122;UBERON:0002021!3.44e-07!10;UBERON:0000411!3.44e-07!10;UBERON:0001950!3.44e-07!10;UBERON:0003056!5.82e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.49e-18,95;UBERON:0000924,4.49e-18,95;UBERON:0006601,4.49e-18,95;UBERON:0001016,5.33e-18,75;UBERON:0001017,2.25e-17,73;UBERON:0000073,2.00e-14,54;UBERON:0001049,2.32e-13,52;UBERON:0005068,2.32e-13,52;UBERON:0006241,2.32e-13,52;UBERON:0007135,2.32e-13,52;UBERON:0000955,7.00e-12,47;UBERON:0006238,7.00e-12,47;UBERON:0010371,7.28e-12,73;UBERON:0002616,2.15e-11,46;UBERON:0010314,2.22e-11,92;UBERON:0002346,6.65e-11,64;UBERON:0003075,6.65e-11,64;UBERON:0007284,6.65e-11,64;UBERON:0002020,5.75e-10,34;UBERON:0007023,1.68e-09,51;UBERON:0003080,8.91e-09,40;UBERON:0003528,1.10e-08,29;UBERON:0002791,1.10e-08,29;UBERON:0001893,1.10e-08,29;UBERON:0002780,2.85e-08,39;UBERON:0001890,2.85e-08,39;UBERON:0006240,2.85e-08,39;UBERON:0004111,1.04e-07,122;UBERON:0002021,3.44e-07,10;UBERON:0000411,3.44e-07,10;UBERON:0001950,3.44e-07,10;UBERON:0003056,5.82e-07,49 | |||
|phase1_expression=31.5493228796444,182.514138195386,184.729691192152,222.613659521827,244.437116213817,35.5904056453206,32.2385444021825,25.6955413648737,5.490760163915,6.78787126333781,3.93801326918661,3.11111420081812,11.8128503652532,14.5992072039726,7.32841475994458,3.84703008040669,4.19737126876888,8.20201629931418,10.6949258212476,11.0341309467488,46.7738095830884,7.84398514486994,7.31359409589019,37.5982193564506,37.6231220950159,106.807145325394,79.2602072932698,65.5032547365103,51.4963466726773,54.690538157905,25.2772782147047,12.065582795733,8.61090702618398,15.8481681015439,11.2652131702997,8.97667084935859,16.1293791447272,10.0447591376858,7.813353445238,2.61761871986899,71.1760100517527,6.14740936462601,8.25367600152961,37.8949422106488,41.6659187312205,34.3232426542344,49.2906546939265,42.5149054941871,83.9201218045682,65.3284460889592,31.7769177089573,43.1257693094915,7.55021727259814,16.6833292662609,12.0993767691287,21.3525331909836,26.0745430344269,35.0657022748661,37.6308617198852,40.2033144246745,41.8328726314078,43.3721001048489,27.5681386794453,14.3983954765024,12.8552627133707,23.4458437932213,61.7176227667914,76.0752244536678,22.7080250955566,23.8960510847092,22.7150958259493,59.7010557403949,50.7997644188711,18.618601480673,22.6195311603038,21.1420320920305,106.812404569407,104.065180539428,107.52457327937,36.4006154135335,38.0588597386024,32.8175423450759,117.25685958058,78.2240027944035,91.8317469138629,37.7124589406295,40.0064423045479,38.2118863941866,44.0726445199131,40.8086424576642,51.0161500114953,21.5105969245347,10.879541339324,13.4925797909454,20.1430689408777,26.4335863387428,30.4764391685902,17.0430322578058,10.3914401841148,19.7870161725791,23.380007682929,26.9485602570067,50.9610479413291,21.3320010945999,6.061749148314,7.34743609877786,7.58286667522175,34.3693477954371,15.7952109024775,52.2516329508183,15.4401940821861,19.485790611977,22.3697032338377,19.1417753501831,28.1037010054335,38.0769771728917,50.6749683855466,48.4407845681704,22.9998743506967,26.5297633913751,28.4885558813908,23.7588874036259,55.9175283654366,93.9826358407066,83.5692360185686,56.4560092010987,8.02761334189666,4.19931911695385,4.82866862877646,111.594026356593,90.1276187552694,32.418822845119,118.37436205094,117.884825829282,118.439185398949,88.9082121611312,24.5432866879262,22.8908825922571,22.2396027421634,33.2498132300629,10.539755879979,12.8745178482745,14.2249082546226,18.3859877759572,25.9219061766559,25.2384028961154,25.6742725293657,49.153640440413,8.191583731448,14.3720620927543,12.1406275673125,13.8093311429372,18.3511184488895,36.9147296513497,29.221063369928,13.733364410476,2.80885274925294,2.05878325691772,5.39910648851626,19.4698226183372,15.2441938987713,15.8454614085693,25.0949419720323,22.0375939557092,23.7571353846563,19.5328513590343,32.9976283721532,38.0655016116973,45.912198125861,43.011875588723,60.3962631116625,61.1115947437889,56.204829514509,69.7873377553933,92.527577368216,30.6655744890268,135.471701023357,49.4522559660828,9.81125952462076,18.1144604051142,16.62390251055,21.176770085451,29.7986578752126,32.3383564391351,58.8416036315194,38.5395554054185,38.9569573640418,40.5871202963948,41.5273505563726,61.1197197884871,55.115202718047,67.1106090867218,13.4664209676688,16.6802828410204,15.7790829942313,19.1432248174595,25.6017283061266,36.6810338026366,45.1508875067197,63.4723636312289,67.3524542439498,72.1873408942533,18.3800628794032,9.17648081438517,8.84515478009414,10.3436571697033,6.6943840058206,11.3353265083636,8.65727896056827,9.20627639842594,16.2135226775035,7.68771956926628,5.75072826109418,11.9085103253921,13.7296576170407,15.4073115547738,16.8633568710597,26.0519501536218,36.9506380333209,11.1799932944586,17.7631824321808,18.1627241779451,12.2038929110021,22.9483572695288,30.9456733151818,39.2218632194176,28.847231371433,26.7972274475018,36.993506328537,40.1465121053558,37.8180110286311,40.5017364028232,15.0791283939272,5.98296252200581,32.9482062922754,34.2161565417868,129.40377553016,105.490517932983,11.639381121744,51.2515982224877,24.9251493338843,21.0836921920185,35.329437228179,30.1100685420216,35.4249891791007,30.8553418559827,23.074209995469,27.179794785752,35.9711877931336,83.8648635860916,41.5884449660227,16.2039699337202,19.7093220817827,35.7985166850402,14.6019652173959,15.2951800777638,8.76738315197778,17.1630622577867,17.7181135728464,19.3684143204674,32.5619649391959,23.6296924160379,18.5378636760055,22.7546465713787,21.0837217149998,25.7838858120467,74.5562736600796,13.8647042404109,15.0056073187995,17.361299837559,23.9409315417069,29.0741172691375,26.6569413375436,36.2313289446373,22.9978273902436,16.7347335982418,43.8851512129374,47.9818996059707,35.0377805930115,28.5883264159459,37.9604053929974,34.962011645698,50.717665573594,123.67867644101,11.2774781326583,18.3684312487268,12.5932278611404,10.5486335922627,7.24479406921433,7.32090154260872,13.5982743995084,10.9162132812453,10.6413979829406,36.2774834845743,12.0207677560831,14.84232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| |||
|short_description=p1@Tom1l2 | |||
}} |
Revision as of 05:27, 6 August 2015
Short description: | p1@Tom1l2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tom1l2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1295 |
Association with transcript: | 0bp_to_ENSMUST00000063998_5end |
EntrezGene: | 216810 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.66e-07 | 43 |
ectodermal cell | 2.27e-07 | 44 |
neurectodermal cell | 2.27e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 4.49e-18 | 95 |
ectoderm | 4.49e-18 | 95 |
presumptive ectoderm | 4.49e-18 | 95 |
nervous system | 5.33e-18 | 75 |
central nervous system | 2.25e-17 | 73 |
regional part of nervous system | 2.00e-14 | 54 |
neural tube | 2.32e-13 | 52 |
neural rod | 2.32e-13 | 52 |
future spinal cord | 2.32e-13 | 52 |
neural keel | 2.32e-13 | 52 |
brain | 7.00e-12 | 47 |
future brain | 7.00e-12 | 47 |
ecto-epithelium | 7.28e-12 | 73 |
regional part of brain | 2.15e-11 | 46 |
structure with developmental contribution from neural crest | 2.22e-11 | 92 |
neurectoderm | 6.65e-11 | 64 |
neural plate | 6.65e-11 | 64 |
presumptive neural plate | 6.65e-11 | 64 |
gray matter | 5.75e-10 | 34 |
adult organism | 1.68e-09 | 51 |
anterior neural tube | 8.91e-09 | 40 |
brain grey matter | 1.10e-08 | 29 |
regional part of telencephalon | 1.10e-08 | 29 |
telencephalon | 1.10e-08 | 29 |
regional part of forebrain | 2.85e-08 | 39 |
forebrain | 2.85e-08 | 39 |
future forebrain | 2.85e-08 | 39 |
anatomical conduit | 1.04e-07 | 122 |
occipital lobe | 3.44e-07 | 10 |
visual cortex | 3.44e-07 | 10 |
neocortex | 3.44e-07 | 10 |
pre-chordal neural plate | 5.82e-07 | 49 |